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Nicotinic acetylcholine receptor alpha7, isoform A (Nicotinic acetylcholine receptor alpha7, isoform D) (Nicotinic acetylcholine receptor alpha7, isoform F)

 Q9VWI9_DROME            Unreviewed;       560 AA.
Q9VWI9; Q7KUV2;
01-MAY-2000, integrated into UniProtKB/TrEMBL.
30-NOV-2010, sequence version 4.
27-SEP-2017, entry version 147.
SubName: Full=Nicotinic acetylcholine receptor alpha7, isoform A {ECO:0000313|EMBL:AAS65409.1};
SubName: Full=Nicotinic acetylcholine receptor alpha7, isoform D {ECO:0000313|EMBL:AAF48950.4};
SubName: Full=Nicotinic acetylcholine receptor alpha7, isoform F {ECO:0000313|EMBL:AHN59906.1};
Name=nAChRalpha7 {ECO:0000313|EMBL:AAF48950.4,
ECO:0000313|FlyBase:FBgn0086778};
Synonyms=CT24218 {ECO:0000313|EMBL:AAF48950.4},
Da7 {ECO:0000313|EMBL:AAF48950.4},
Dalpha7 {ECO:0000313|EMBL:AAF48950.4},
Dalpha7 nAChR {ECO:0000313|EMBL:AAF48950.4},
Dalpha7-nAChR {ECO:0000313|EMBL:AAF48950.4},
Dmel\CG32538 {ECO:0000313|EMBL:AAF48950.4},
gfA {ECO:0000313|EMBL:AAF48950.4, ECO:0000313|FlyBase:FBgn0086778},
gfa {ECO:0000313|EMBL:AAF48950.4}, jpl {ECO:0000313|EMBL:AAF48950.4},
nAChR {ECO:0000313|EMBL:AAF48950.4},
nAChR-Dalpha7 {ECO:0000313|EMBL:AAF48950.4},
nAChR-gfa {ECO:0000313|EMBL:AAF48950.4},
nAchRa7 {ECO:0000313|EMBL:AAF48950.4},
nAcR-alpha-18C {ECO:0000313|FlyBase:FBgn0086778},
nAcRalpha-18C {ECO:0000313|EMBL:AAF48950.4},
nAcRalpha-7 {ECO:0000313|EMBL:AAF48950.4},
nAcRalpha18C {ECO:0000313|EMBL:AAF48950.4},
nj507 {ECO:0000313|EMBL:AAF48950.4},
nj520 {ECO:0000313|EMBL:AAF48950.4},
nj522 {ECO:0000313|EMBL:AAF48950.4},
nj54 {ECO:0000313|EMBL:AAF48950.4},
nj75 {ECO:0000313|EMBL:AAF48950.4};
ORFNames=CG32538 {ECO:0000313|EMBL:AAF48950.4,
ECO:0000313|FlyBase:FBgn0086778},
CG8082 {ECO:0000313|EMBL:AAF48950.4},
CG8109 {ECO:0000313|EMBL:AAF48950.4},
Dmel_CG32538 {ECO:0000313|EMBL:AAF48950.4};
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227 {ECO:0000313|EMBL:AAF48950.4, ECO:0000313|Proteomes:UP000000803};
[1] {ECO:0000313|EMBL:AAF48950.4, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L.,
Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J.,
Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O.,
Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[2] {ECO:0000313|EMBL:AAF48950.4, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537568;
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
"Finishing a whole-genome shotgun: release 3 of the Drosophila
melanogaster euchromatic genome sequence.";
Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002).
[3] {ECO:0000313|EMBL:AAF48950.4, ECO:0000313|Proteomes:UP000000803}
GENOME REANNOTATION.
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[4] {ECO:0000313|EMBL:AAF48950.4, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537573;
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M.,
Ashburner M., Celniker S.E.;
"The transposable elements of the Drosophila melanogaster euchromatin:
a genomics perspective.";
Genome Biol. 3:RESEARCH0084-RESEARCH0084(2002).
[5] {ECO:0000313|EMBL:AAF48950.4, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537574;
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
Karpen G.H.;
"Heterochromatic sequences in a Drosophila whole-genome shotgun
assembly.";
Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002).
[6] {ECO:0000313|EMBL:AAF48950.4, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=16110336; DOI=10.1371/journal.pcbi.0010022;
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
Ashburner M., Anxolabehere D.;
"Combined evidence annotation of transposable elements in genome
sequences.";
PLoS Comput. Biol. 1:166-175(2005).
[7] {ECO:0000313|EMBL:AAF48950.4}
NUCLEOTIDE SEQUENCE.
Berkeley Drosophila Genome Project;
Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R.,
Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E.,
Yu C., Rubin G.;
"Drosophila melanogaster release 4 sequence.";
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[8] {ECO:0000313|EMBL:AAF48950.4}
NUCLEOTIDE SEQUENCE.
Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S.,
Svirskas R., Rubin G.;
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[9] {ECO:0000313|EMBL:AAF48950.4, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569856; DOI=10.1126/science.1139815;
Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
"The Release 5.1 annotation of Drosophila melanogaster
heterochromatin.";
Science 316:1586-1591(2007).
[10] {ECO:0000313|EMBL:AAF48950.4, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569867; DOI=10.1126/science.1139816;
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
Dimitri P., Karpen G.H., Celniker S.E.;
"Sequence finishing and mapping of Drosophila melanogaster
heterochromatin.";
Science 316:1625-1628(2007).
[11] {ECO:0000313|EMBL:AAF48950.4}
NUCLEOTIDE SEQUENCE.
FlyBase;
Submitted (DEC-2016) to the EMBL/GenBank/DDBJ databases.
-!- SUBCELLULAR LOCATION: Cell junction, synapse, postsynaptic cell
membrane {ECO:0000256|SAAS:SAAS00548360}; Multi-pass membrane
protein {ECO:0000256|SAAS:SAAS00548360}.
-!- SUBCELLULAR LOCATION: Cell membrane
{ECO:0000256|SAAS:SAAS00548374}; Multi-pass membrane protein
{ECO:0000256|SAAS:SAAS00548374}.
-!- SIMILARITY: Belongs to the ligand-gated ion channel (TC 1.A.9)
family. {ECO:0000256|RuleBase:RU000687,
ECO:0000256|SAAS:SAAS00569405}.
-----------------------------------------------------------------------
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EMBL; AE014298; AAF48950.4; -; Genomic_DNA.
EMBL; AE014298; AAS65409.1; -; Genomic_DNA.
EMBL; AE014298; AHN59906.1; -; Genomic_DNA.
RefSeq; NP_001285436.1; NM_001298507.1.
RefSeq; NP_728239.3; NM_167645.4.
RefSeq; NP_996514.1; NM_206791.3.
TCDB; 1.A.9.1.8; the neurotransmitter receptor, cys loop, ligand-gated ion channel (lic) family.
EnsemblMetazoa; FBtr0074680; FBpp0089248; FBgn0086778.
EnsemblMetazoa; FBtr0301834; FBpp0291048; FBgn0086778.
EnsemblMetazoa; FBtr0343798; FBpp0310357; FBgn0086778.
GeneID; 32928; -.
UCSC; CG32538-RA; d. melanogaster.
UCSC; CG32538-RB; d. melanogaster.
CTD; 32928; -.
FlyBase; FBgn0086778; nAChRalpha7.
eggNOG; KOG3646; Eukaryota.
eggNOG; ENOG410XQGR; LUCA.
GeneTree; ENSGT00790000122957; -.
OrthoDB; EOG091G0R20; -.
Reactome; R-DME-629594; Highly calcium permeable postsynaptic nicotinic acetylcholine receptors.
GenomeRNAi; 32928; -.
Proteomes; UP000000803; Chromosome X.
Bgee; FBgn0086778; -.
GO; GO:0005892; C:acetylcholine-gated channel complex; IPI:FlyBase.
GO; GO:0030054; C:cell junction; IEA:UniProtKB-KW.
GO; GO:0030425; C:dendrite; IDA:FlyBase.
GO; GO:0043197; C:dendritic spine; IDA:FlyBase.
GO; GO:0014069; C:postsynaptic density of dendrite; IDA:FlyBase.
GO; GO:0045211; C:postsynaptic membrane; IEA:UniProtKB-SubCell.
GO; GO:0022848; F:acetylcholine-gated cation-selective channel activity; IDA:FlyBase.
GO; GO:0006812; P:cation transport; IDA:FlyBase.
GO; GO:0007268; P:chemical synaptic transmission; IMP:FlyBase.
GO; GO:0060079; P:excitatory postsynaptic potential; IMP:FlyBase.
GO; GO:0007630; P:jump response; IMP:FlyBase.
GO; GO:0007271; P:synaptic transmission, cholinergic; IEP:FlyBase.
GO; GO:0007632; P:visual behavior; IMP:FlyBase.
Gene3D; 2.70.170.10; -; 1.
InterPro; IPR006202; Neur_chan_lig-bd.
InterPro; IPR006201; Neur_channel.
InterPro; IPR006029; Neurotrans-gated_channel_TM.
InterPro; IPR018000; Neurotransmitter_ion_chnl_CS.
InterPro; IPR002394; Nicotinic_acetylcholine_rcpt.
PANTHER; PTHR18945; PTHR18945; 1.
Pfam; PF02931; Neur_chan_LBD; 1.
Pfam; PF02932; Neur_chan_memb; 1.
PRINTS; PR00254; NICOTINICR.
PRINTS; PR00252; NRIONCHANNEL.
SUPFAM; SSF63712; SSF63712; 1.
SUPFAM; SSF90112; SSF90112; 2.
TIGRFAMs; TIGR00860; LIC; 1.
PROSITE; PS00236; NEUROTR_ION_CHANNEL; 1.
3: Inferred from homology;
Cell junction {ECO:0000256|SAAS:SAAS00032441};
Cell membrane {ECO:0000256|SAAS:SAAS00032539};
Complete proteome {ECO:0000313|Proteomes:UP000000803};
Disulfide bond {ECO:0000256|SAAS:SAAS00079022};
Ion channel {ECO:0000256|SAAS:SAAS00032596};
Ion transport {ECO:0000256|SAAS:SAAS00032596};
Ligand-gated ion channel {ECO:0000256|SAAS:SAAS00032596};
Membrane {ECO:0000256|SAAS:SAAS00032441,
ECO:0000256|SAAS:SAAS00032539, ECO:0000256|SAAS:SAAS00081645,
ECO:0000256|SAM:Phobius};
Postsynaptic cell membrane {ECO:0000256|SAAS:SAAS00032441};
Receptor {ECO:0000256|SAAS:SAAS00079193, ECO:0000313|EMBL:AAF48950.4};
Reference proteome {ECO:0000313|Proteomes:UP000000803};
Synapse {ECO:0000256|SAAS:SAAS00032441};
Transmembrane {ECO:0000256|SAAS:SAAS00081645,
ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAAS:SAAS00081645,
ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|SAAS:SAAS00032596}.
TRANSMEM 269 288 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 330 353 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 534 558 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 61 268 Neur_chan_LBD.
{ECO:0000259|Pfam:PF02931}.
DOMAIN 275 550 Neur_chan_memb.
{ECO:0000259|Pfam:PF02932}.
SEQUENCE 560 AA; 63147 MW; 096E7BB4503014F5 CRC64;
MKKPSRSRPD NPSCPGQDRT RSMSFPQPHS LPEATANGGR MLVYGLGLLI MIPACAAGPH
EKRLLHALLD NYNSLERPVV NESDPLQLSF GLTLMQIIDV DEKNQLLITN IWLKLEWNDM
NLRWNSSEFG GVRDLRIPPH RLWKPDVLMY NSADEGFDGT YATNVVVRNN GSCLYVPPGI
FKSTCKIDIT WFPFDDQRCE MKFGSWTYDG FQLDLQLQDE AGGDISSFIT NGEWDLLGVP
GKRNEIYYNC CPEPYIDITF AILIRRKTLY YFFNLIVPCV LIASMALLGF TLPPDSGEKL
SLGVTILLSL TVFLNMVAET MPATSDAVPL LGTYFNCIMF MVASSVVSTI LILNYHHRNP
DTHEMSEWIR VIFLYWLPCI LRMQRPGQVG YECPPPPSSS SSSASGEKKQ QIQNVELKER
SSKSLLANVL DIDDDFRCNH RCASATLPHQ PTYYRTMYRQ GDDGSVGPVG PAGPVVDGRL
HEAISHTCLT SSAEYELALI LKELRWITEQ LKKEDETSDI TRDWKFAAMV VDRLCLIIFT
LFTIIATLAV LFSAPHFIFP


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