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Nuclear factor 7, ovary (xNF7-O)

 NF7O_XENLA              Reviewed;         610 AA.
Q91431; Q801R9;
27-SEP-2004, integrated into UniProtKB/Swiss-Prot.
01-NOV-1996, sequence version 1.
22-NOV-2017, entry version 114.
RecName: Full=Nuclear factor 7, ovary;
Short=xNF7-O;
Xenopus laevis (African clawed frog).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus;
Xenopus.
NCBI_TaxID=8355;
[1] {ECO:0000305, ECO:0000312|EMBL:AAB35876.1}
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), FUNCTION, TISSUE SPECIFICITY,
AND DEVELOPMENTAL STAGE.
TISSUE=Ovary {ECO:0000269|PubMed:8541218};
PubMed=8541218; DOI=10.1016/0925-4773(95)00410-3;
Gong S.-G., Reddy B.A., Etkin L.D.;
"Two forms of Xenopus nuclear factor 7 have overlapping spatial but
different temporal patterns of expression during development.";
Mech. Dev. 52:305-318(1995).
[2] {ECO:0000305, ECO:0000312|EMBL:AAH47956.1}
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
TISSUE=Embryo {ECO:0000312|EMBL:AAH47956.1};
NIH - Xenopus Gene Collection (XGC) project;
Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases.
-!- FUNCTION: Transcription factor that determines dorsal-ventral body
axis. {ECO:0000269|PubMed:8541218}.
-!- SUBUNIT: Monomer. {ECO:0000250|UniProtKB:Q92021}.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
-!- ALTERNATIVE PRODUCTS:
Event=Alternative splicing; Named isoforms=2;
Name=1 {ECO:0000269|PubMed:8541218};
IsoId=Q91431-1; Sequence=Displayed;
Name=2 {ECO:0000305};
IsoId=Q91431-2; Sequence=VSP_051606;
Note=No experimental confirmation available. {ECO:0000305};
-!- TISSUE SPECIFICITY: Abundant in oocytes. At the neurula stage, low
expression in dorsal embryo region including neural folds and
somites. {ECO:0000269|PubMed:8541218}.
-!- DEVELOPMENTAL STAGE: Expressed both maternally and zygotically.
{ECO:0000269|PubMed:8541218}.
-!- SEQUENCE CAUTION:
Sequence=AAH47956.1; Type=Frameshift; Positions=62; Evidence={ECO:0000305};
-----------------------------------------------------------------------
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EMBL; S80988; AAB35876.1; -; mRNA.
EMBL; BC047956; AAH47956.1; ALT_FRAME; mRNA.
RefSeq; NP_001079694.2; NM_001086225.2. [Q91431-1]
UniGene; Xl.2747; -.
ProteinModelPortal; Q91431; -.
SMR; Q91431; -.
IntAct; Q91431; 2.
GeneID; 379381; -.
KEGG; xla:379381; -.
CTD; 379381; -.
Xenbase; XB-GENE-6256071; xnf7.
HOVERGEN; HBG001357; -.
KO; K12034; -.
GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
GO; GO:0007275; P:multicellular organism development; IEA:UniProtKB-KW.
GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-KW.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
CDD; cd00021; BBOX; 1.
CDD; cd00024; CHROMO; 1.
Gene3D; 3.30.40.10; -; 1.
InterPro; IPR001870; B30.2/SPRY.
InterPro; IPR003649; Bbox_C.
InterPro; IPR003879; Butyrophylin_SPRY.
InterPro; IPR016197; Chromo-like_dom_sf.
InterPro; IPR000953; Chromo/chromo_shadow_dom.
InterPro; IPR013320; ConA-like_dom_sf.
InterPro; IPR006574; PRY.
InterPro; IPR003877; SPRY_dom.
InterPro; IPR025995; Tudor-knot.
InterPro; IPR000315; Znf_B-box.
InterPro; IPR001841; Znf_RING.
InterPro; IPR013083; Znf_RING/FYVE/PHD.
InterPro; IPR017907; Znf_RING_CS.
Pfam; PF13765; PRY; 1.
Pfam; PF00622; SPRY; 1.
Pfam; PF11717; Tudor-knot; 1.
Pfam; PF00643; zf-B_box; 1.
PRINTS; PR01407; BUTYPHLNCDUF.
SMART; SM00502; BBC; 1.
SMART; SM00336; BBOX; 1.
SMART; SM00298; CHROMO; 1.
SMART; SM00589; PRY; 1.
SMART; SM00184; RING; 1.
SMART; SM00449; SPRY; 1.
SUPFAM; SSF49899; SSF49899; 1.
SUPFAM; SSF54160; SSF54160; 1.
PROSITE; PS50188; B302_SPRY; 1.
PROSITE; PS50119; ZF_BBOX; 1.
PROSITE; PS00518; ZF_RING_1; 1.
PROSITE; PS50089; ZF_RING_2; 1.
2: Evidence at transcript level;
Alternative splicing; Coiled coil; Developmental protein; DNA-binding;
Metal-binding; Nucleus; Phosphoprotein; Transcription;
Transcription regulation; Zinc; Zinc-finger.
CHAIN 1 610 Nuclear factor 7, ovary.
/FTId=PRO_0000055978.
DOMAIN 415 610 B30.2/SPRY. {ECO:0000255|PROSITE-
ProRule:PRU00548}.
ZN_FING 146 186 RING-type. {ECO:0000255|PROSITE-
ProRule:PRU00175}.
ZN_FING 220 261 B box-type. {ECO:0000255|PROSITE-
ProRule:PRU00024}.
COILED 295 374 {ECO:0000255}.
MOD_RES 104 104 Phosphothreonine; by CDK1. {ECO:0000250}.
VAR_SEQ 62 118 Missing (in isoform 2).
{ECO:0000303|Ref.2}.
/FTId=VSP_051606.
CONFLICT 265 265 I -> V (in Ref. 2; AAH47956).
{ECO:0000305}.
CONFLICT 533 533 R -> A (in Ref. 2; AAH47956).
{ECO:0000305}.
SEQUENCE 610 AA; 69115 MW; D828F60060572EC1 CRC64;
MEEDEGADDG EQEEEEVLLV NVGSTYPCKR SDGSQHDADI VKTRYNKQAG REEYYVHYVG
LNRRQNEWVD KSRLVLTKPP KEVETNGTDQ EEMTEPTEQP DSKTPQKRKL EEPEPEPKKA
KVEDKDASKT AASLGAAGDF AEELTCPLCV ELFKDPVMVA CGHNFCRSCI DKVWEGQSSF
ACPECKESIT DRKYTINRVL ANLAKKAACT PVTPVEKKTR PLEKCSEHDE RLKLYCKDDG
TLGCVICRDS LKHASHNFLP ILDAIGVYRE ELSAIVAPLE ASLKVTEQLS GEQSDKIEQH
NKNVSQYKEH VTSEFEKLHK FLKEREEKLL EQLKEQGDNL LTEMENNLVK MQENQDAIKK
TISLAKERME ETDSISFLTD IKTFIDKCQE QQRAVISTGN TLLSKELCQG TFKGPIQYIM
WKELKSVITP SLTPMLLDPN SAHPNLHLSD GLTSVRYGEN KLSLPDNPKR FSQCILVLGS
QGFDSGRHYW EVEVGDKTAW DVGMASESSN RKGKIKLNPK NGYWAIWLRN GNRYKALESP
SKALSLTSHP RKIGVYVDYE GGQISFYNAD NMTIIYTFSA TFTEKLYPYL SPFLHDSGKN
VDALRFVHNQ


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