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Odd-skipped related transciption factor 1 (Protein odd-skipped-related 1) (Fragment)

 R0LGB0_ANAPL            Unreviewed;       260 AA.
R0LGB0;
26-JUN-2013, integrated into UniProtKB/TrEMBL.
26-JUN-2013, sequence version 1.
23-MAY-2018, entry version 32.
SubName: Full=Odd-skipped related transciption factor 1 {ECO:0000313|Ensembl:ENSAPLP00000007598};
SubName: Full=Protein odd-skipped-related 1 {ECO:0000313|EMBL:EOB04689.1};
Flags: Fragment;
Name=OSR1 {ECO:0000313|Ensembl:ENSAPLP00000007598};
ORFNames=Anapl_04996 {ECO:0000313|EMBL:EOB04689.1};
Anas platyrhynchos (Mallard) (Anas boschas).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae;
Anatinae; Anas.
NCBI_TaxID=8839 {ECO:0000313|EMBL:EOB04689.1};
[1] {ECO:0000313|EMBL:EOB04689.1, ECO:0000313|Ensembl:ENSAPLP00000007598}
NUCLEOTIDE SEQUENCE.
Li N.;
"The genome sequence and transcriptome of duck provide insight into
the interaction host.";
Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases.
[2] {ECO:0000313|Ensembl:ENSAPLP00000007598}
NUCLEOTIDE SEQUENCE.
PubMed=23749191; DOI=10.1038/ng.2657;
Huang Y., Li Y., Burt D.W., Chen H., Zhang Y., Qian W., Kim H.,
Gan S., Zhao Y., Li J., Yi K., Feng H., Zhu P., Li B., Liu Q.,
Fairley S., Magor K.E., Du Z., Hu X., Goodman L., Tafer H., Vignal A.,
Lee T., Kim K.W., Sheng Z., An Y., Searle S., Herrero J.,
Groenen M.A., Crooijmans R.P., Faraut T., Cai Q., Webster R.G.,
Aldridge J.R., Warren W.C., Bartschat S., Kehr S., Marz M.,
Stadler P.F., Smith J., Kraus R.H., Zhao Y., Ren L., Fei J.,
Morisson M., Kaiser P., Griffin D.K., Rao M., Pitel F., Wang J.,
Li N.;
"The duck genome and transcriptome provide insight into an avian
influenza virus reservoir species.";
Nat. Genet. 45:776-783(2013).
[3] {ECO:0000313|Ensembl:ENSAPLP00000007598}
IDENTIFICATION.
Ensembl;
Submitted (SEP-2013) to UniProtKB.
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EMBL; ADON01041401; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; KB742764; EOB04689.1; -; Genomic_DNA.
RefSeq; XP_005015099.1; XM_005015042.2.
Ensembl; ENSAPLT00000008262; ENSAPLP00000007598; ENSAPLG00000007971.
GeneID; 101798983; -.
KEGG; apla:101798983; -.
CTD; 130497; -.
GeneTree; ENSGT00880000137939; -.
KO; K09215; -.
OMA; ATQEDHL; -.
OrthoDB; EOG091G0LRE; -.
Proteomes; UP000016666; Unassembled WGS sequence.
GO; GO:0005634; C:nucleus; IEA:Ensembl.
GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO; GO:0019901; F:protein kinase binding; IEA:Ensembl.
GO; GO:0004674; F:protein serine/threonine kinase activity; IEA:Ensembl.
GO; GO:0071300; P:cellular response to retinoic acid; IEA:Ensembl.
GO; GO:0002062; P:chondrocyte differentiation; IEA:Ensembl.
GO; GO:0042733; P:embryonic digit morphogenesis; IEA:Ensembl.
GO; GO:0035115; P:embryonic forelimb morphogenesis; IEA:Ensembl.
GO; GO:0035116; P:embryonic hindlimb morphogenesis; IEA:Ensembl.
GO; GO:0036023; P:embryonic skeletal limb joint morphogenesis; IEA:Ensembl.
GO; GO:0008406; P:gonad development; IEA:Ensembl.
GO; GO:0007507; P:heart development; IEA:Ensembl.
GO; GO:0048389; P:intermediate mesoderm development; IEA:Ensembl.
GO; GO:0072143; P:mesangial cell development; IEA:Ensembl.
GO; GO:0072180; P:mesonephric duct morphogenesis; IEA:Ensembl.
GO; GO:0090094; P:metanephric cap mesenchymal cell proliferation involved in metanephros development; IEA:Ensembl.
GO; GO:0072239; P:metanephric glomerulus vasculature development; IEA:Ensembl.
GO; GO:0072259; P:metanephric interstitial fibroblast development; IEA:Ensembl.
GO; GO:0072162; P:metanephric mesenchymal cell differentiation; IEA:Ensembl.
GO; GO:0072234; P:metanephric nephron tubule development; IEA:Ensembl.
GO; GO:0072208; P:metanephric smooth muscle tissue development; IEA:Ensembl.
GO; GO:0042474; P:middle ear morphogenesis; IEA:Ensembl.
GO; GO:0043066; P:negative regulation of apoptotic process; IEA:Ensembl.
GO; GO:1905408; P:negative regulation of creatine transmembrane transporter activity; IEA:Ensembl.
GO; GO:0072183; P:negative regulation of nephron tubule epithelial cell differentiation; IEA:Ensembl.
GO; GO:2000650; P:negative regulation of sodium ion transmembrane transporter activity; IEA:Ensembl.
GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IEA:Ensembl.
GO; GO:0007231; P:osmosensory signaling pathway; IEA:Ensembl.
GO; GO:0072268; P:pattern specification involved in metanephros development; IEA:Ensembl.
GO; GO:0018107; P:peptidyl-threonine phosphorylation; IEA:Ensembl.
GO; GO:0030501; P:positive regulation of bone mineralization; IEA:Ensembl.
GO; GO:0050679; P:positive regulation of epithelial cell proliferation; IEA:Ensembl.
GO; GO:2000543; P:positive regulation of gastrulation; IEA:Ensembl.
GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:Ensembl.
GO; GO:0048793; P:pronephros development; IEA:Ensembl.
GO; GO:0072184; P:renal vesicle progenitor cell differentiation; IEA:Ensembl.
GO; GO:0060021; P:roof of mouth development; IEA:Ensembl.
GO; GO:0023016; P:signal transduction by trans-phosphorylation; IEA:Ensembl.
GO; GO:0072168; P:specification of anterior mesonephric tubule identity; IEA:Ensembl.
GO; GO:0072169; P:specification of posterior mesonephric tubule identity; IEA:Ensembl.
GO; GO:0048863; P:stem cell differentiation; IEA:Ensembl.
GO; GO:0072190; P:ureter urothelium development; IEA:Ensembl.
GO; GO:0001657; P:ureteric bud development; IEA:Ensembl.
InterPro; IPR036236; Znf_C2H2_sf.
InterPro; IPR013087; Znf_C2H2_type.
SMART; SM00355; ZnF_C2H2; 3.
SUPFAM; SSF57667; SSF57667; 2.
PROSITE; PS00028; ZINC_FINGER_C2H2_1; 3.
PROSITE; PS50157; ZINC_FINGER_C2H2_2; 3.
4: Predicted;
Complete proteome {ECO:0000313|Proteomes:UP000016666};
Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
Reference proteome {ECO:0000313|Proteomes:UP000016666};
Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
DOMAIN 169 196 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
DOMAIN 197 224 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
DOMAIN 225 252 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
NON_TER 260 260 {ECO:0000313|EMBL:EOB04689.1}.
SEQUENCE 260 AA; 29335 MW; E2D16887C94944FE CRC64;
MGSKTLPAPV PIHPSLQLTN YSFLQAFNGL PAVPSDHLSN LYGFSALHAV HLHQWTLGYP
AMHLPRSSFS KVPSVSSLVD ARFQLPTFPL FPHVIQPKQE ATNVTLKAKP RFDFANLAVA
ATQEDHSKLG QVDSQGSPPG LGSLLEVTKL SPEKKPTRGR LPSKTKKEFV CKFCGRHFTK
SYNLLIHERT HTDERPYTCD ICHKAFRRQD HLRDHRYIHS KEKPFKCQEC GKGFCQSRTL
AVHKTLHTQV KELKPAKLKC


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