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POU domain, class 2, transcription factor 3 (Octamer-binding protein 11) (Oct-11) (Octamer-binding transcription factor 11) (OTF-11) (Transcription factor PLA-1) (Transcription factor Skn-1)

 PO2F3_HUMAN             Reviewed;         436 AA.
Q9UKI9; A8K7H8; B4DY07; F5GWW6; Q3MIY3; Q9UKR7; Q9Y504;
01-FEB-2003, integrated into UniProtKB/Swiss-Prot.
02-NOV-2010, sequence version 3.
12-SEP-2018, entry version 158.
RecName: Full=POU domain, class 2, transcription factor 3;
AltName: Full=Octamer-binding protein 11;
Short=Oct-11;
AltName: Full=Octamer-binding transcription factor 11;
Short=OTF-11;
AltName: Full=Transcription factor PLA-1;
AltName: Full=Transcription factor Skn-1;
Name=POU2F3; Synonyms=OTF11, PLA1;
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), AND VARIANT ARG-152.
PubMed=10473598; DOI=10.1074/jbc.274.37.26399;
Hildesheim J., Foster R.A., Chamberlin M.E., Vogel J.C.;
"Characterization of the regulatory domains of the human skn-1a/Epoc-
1/Oct-11 POU transcription factor.";
J. Biol. Chem. 274:26399-26406(1999).
[2]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), AND VARIANT ARG-152.
Fischer D.F., Hemelaar J., Backendorf C.;
"Characterisation of the human transcription factor Oct-11:
involvement in the regulation of the SPRR2A gene.";
Submitted (MAR-1999) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
TISSUE=Placenta;
Jimenez-Mateo O., Castrillo J.-L.;
"PLA-1, a novel human POU transcription factor, regulates the
placental lactogen-3 gene expression.";
Submitted (OCT-1998) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2), AND
VARIANTS ARG-152 AND LYS-390.
TISSUE=Small intestine, and Testis;
PubMed=14702039; DOI=10.1038/ng1285;
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A.,
Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M.,
Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y.,
Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M.,
Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K.,
Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S.,
Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J.,
Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y.,
Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N.,
Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S.,
Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y.,
Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T.,
Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y.,
Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S.,
Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T.,
Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M.,
Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T.,
Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K.,
Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R.,
Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.;
"Complete sequencing and characterization of 21,243 full-length human
cDNAs.";
Nat. Genet. 36:40-45(2004).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=16554811; DOI=10.1038/nature04632;
Taylor T.D., Noguchi H., Totoki Y., Toyoda A., Kuroki Y., Dewar K.,
Lloyd C., Itoh T., Takeda T., Kim D.-W., She X., Barlow K.F.,
Bloom T., Bruford E., Chang J.L., Cuomo C.A., Eichler E.,
FitzGerald M.G., Jaffe D.B., LaButti K., Nicol R., Park H.-S.,
Seaman C., Sougnez C., Yang X., Zimmer A.R., Zody M.C., Birren B.W.,
Nusbaum C., Fujiyama A., Hattori M., Rogers J., Lander E.S.,
Sakaki Y.;
"Human chromosome 11 DNA sequence and analysis including novel gene
identification.";
Nature 440:497-500(2006).
[6]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
TISSUE=Brain;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
-!- FUNCTION: Transcription factor that binds to the octamer motif
(5'-ATTTGCAT-3'). Regulated the expression of a number of genes
such as SPRR2A or placental lactogen.
-!- SUBCELLULAR LOCATION: Nucleus.
-!- ALTERNATIVE PRODUCTS:
Event=Alternative splicing; Named isoforms=3;
Name=1; Synonyms=Skn-1a;
IsoId=Q9UKI9-1; Sequence=Displayed;
Name=2;
IsoId=Q9UKI9-2; Sequence=VSP_043900;
Note=No experimental confirmation available.;
Name=3; Synonyms=Skn-1n;
IsoId=Q9UKI9-3; Sequence=VSP_043901;
Note=Specifically expressed in keratinocytes, induced by high
calcium concentration.;
-!- TISSUE SPECIFICITY: Specifically expressed in epidermis and
cultured keratinocytes.
-!- SIMILARITY: Belongs to the POU transcription factor family. Class-
2 subfamily. {ECO:0000305}.
-----------------------------------------------------------------------
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EMBL; AF162278; AAF00199.1; -; mRNA.
EMBL; AF133895; AAD55245.1; -; mRNA.
EMBL; AJ012214; CAB45383.1; -; mRNA.
EMBL; AK291993; BAF84682.1; -; mRNA.
EMBL; AK302212; BAG63569.1; -; mRNA.
EMBL; AP000679; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AP001150; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; BC101649; AAI01650.1; -; mRNA.
CCDS; CCDS58190.1; -. [Q9UKI9-2]
CCDS; CCDS8431.1; -. [Q9UKI9-1]
RefSeq; NP_001231611.1; NM_001244682.1. [Q9UKI9-2]
RefSeq; NP_055167.2; NM_014352.3. [Q9UKI9-1]
RefSeq; XP_011541041.1; XM_011542739.2. [Q9UKI9-3]
RefSeq; XP_011541042.1; XM_011542740.2. [Q9UKI9-3]
UniGene; Hs.227115; -.
ProteinModelPortal; Q9UKI9; -.
SMR; Q9UKI9; -.
BioGrid; 117361; 2.
IntAct; Q9UKI9; 1.
STRING; 9606.ENSP00000260264; -.
iPTMnet; Q9UKI9; -.
PhosphoSitePlus; Q9UKI9; -.
BioMuta; POU2F3; -.
DMDM; 311033416; -.
PaxDb; Q9UKI9; -.
PeptideAtlas; Q9UKI9; -.
PRIDE; Q9UKI9; -.
ProteomicsDB; 84796; -.
ProteomicsDB; 84797; -. [Q9UKI9-2]
ProteomicsDB; 84798; -. [Q9UKI9-3]
DNASU; 25833; -.
Ensembl; ENST00000260264; ENSP00000260264; ENSG00000137709. [Q9UKI9-2]
Ensembl; ENST00000543440; ENSP00000441687; ENSG00000137709. [Q9UKI9-1]
GeneID; 25833; -.
KEGG; hsa:25833; -.
UCSC; uc001pxc.4; human. [Q9UKI9-1]
CTD; 25833; -.
DisGeNET; 25833; -.
EuPathDB; HostDB:ENSG00000137709.9; -.
GeneCards; POU2F3; -.
H-InvDB; HIX0010200; -.
HGNC; HGNC:19864; POU2F3.
HPA; HPA019652; -.
MIM; 607394; gene.
neXtProt; NX_Q9UKI9; -.
OpenTargets; ENSG00000137709; -.
PharmGKB; PA134963258; -.
eggNOG; KOG3802; Eukaryota.
eggNOG; ENOG410XQ7X; LUCA.
GeneTree; ENSGT00760000118935; -.
HOGENOM; HOG000220842; -.
HOVERGEN; HBG052783; -.
InParanoid; Q9UKI9; -.
KO; K09364; -.
OMA; KPPVYNS; -.
OrthoDB; EOG091G0U0S; -.
PhylomeDB; Q9UKI9; -.
TreeFam; TF316413; -.
ChiTaRS; POU2F3; human.
GeneWiki; POU2F3; -.
GenomeRNAi; 25833; -.
PRO; PR:Q9UKI9; -.
Proteomes; UP000005640; Chromosome 11.
Bgee; ENSG00000137709; Expressed in 110 organ(s), highest expression level in skin of abdomen.
CleanEx; HS_POU2F3; -.
ExpressionAtlas; Q9UKI9; baseline and differential.
Genevisible; Q9UKI9; HS.
GO; GO:0005634; C:nucleus; IDA:MGI.
GO; GO:0000978; F:RNA polymerase II proximal promoter sequence-specific DNA binding; IMP:NTNU_SB.
GO; GO:0000981; F:RNA polymerase II transcription factor activity, sequence-specific DNA binding; ISA:NTNU_SB.
GO; GO:0043565; F:sequence-specific DNA binding; IDA:MGI.
GO; GO:0001077; F:transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding; IDA:NTNU_SB.
GO; GO:0008544; P:epidermis development; TAS:ProtInc.
GO; GO:0043922; P:negative regulation by host of viral transcription; IDA:UniProtKB.
GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IDA:NTNU_SB.
GO; GO:0006357; P:regulation of transcription by RNA polymerase II; TAS:ProtInc.
CDD; cd00086; homeodomain; 1.
CDD; cd00093; HTH_XRE; 1.
InterPro; IPR001387; Cro/C1-type_HTH.
InterPro; IPR009057; Homeobox-like_sf.
InterPro; IPR017970; Homeobox_CS.
InterPro; IPR001356; Homeobox_dom.
InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
InterPro; IPR013847; POU.
InterPro; IPR000327; POU_dom.
InterPro; IPR000972; TF_octamer.
Pfam; PF00046; Homeobox; 1.
Pfam; PF00157; Pou; 1.
PRINTS; PR00029; OCTAMER.
PRINTS; PR00028; POUDOMAIN.
SMART; SM00389; HOX; 1.
SMART; SM00352; POU; 1.
SUPFAM; SSF46689; SSF46689; 1.
SUPFAM; SSF47413; SSF47413; 1.
PROSITE; PS00027; HOMEOBOX_1; 1.
PROSITE; PS50071; HOMEOBOX_2; 1.
PROSITE; PS00035; POU_1; 1.
PROSITE; PS00465; POU_2; 1.
PROSITE; PS51179; POU_3; 1.
2: Evidence at transcript level;
Alternative splicing; Complete proteome; DNA-binding; Homeobox;
Nucleus; Polymorphism; Reference proteome; Transcription;
Transcription regulation.
CHAIN 1 436 POU domain, class 2, transcription factor
3.
/FTId=PRO_0000100717.
DOMAIN 183 257 POU-specific. {ECO:0000255|PROSITE-
ProRule:PRU00530}.
DNA_BIND 281 340 Homeobox. {ECO:0000255|PROSITE-
ProRule:PRU00108}.
COMPBIAS 354 425 Ser-rich.
VAR_SEQ 1 9 MVNLESMHT -> MESPRTAKGGR (in isoform 2).
{ECO:0000303|PubMed:14702039}.
/FTId=VSP_043900.
VAR_SEQ 1 9 MVNLESMHT -> MNDAK (in isoform 3).
{ECO:0000305}.
/FTId=VSP_043901.
VARIANT 152 152 H -> R (in dbSNP:rs7110845).
{ECO:0000269|PubMed:10473598,
ECO:0000269|PubMed:14702039,
ECO:0000269|Ref.2}.
/FTId=VAR_031618.
VARIANT 390 390 R -> K (in dbSNP:rs2282537).
{ECO:0000269|PubMed:14702039}.
/FTId=VAR_055906.
CONFLICT 6 6 S -> P (in Ref. 3; CAB45383).
{ECO:0000305}.
CONFLICT 37 37 N -> K (in Ref. 2; AAD55245).
{ECO:0000305}.
CONFLICT 351 351 V -> D (in Ref. 1; AAF00199).
{ECO:0000305}.
SEQUENCE 436 AA; 47432 MW; CFF7F0153F0B7589 CRC64;
MVNLESMHTD IKMSGDVADS TDARSTLSQV EPGNDRNGLD FNRQIKTEDL SDSLQQTLSH
RPCHLSQGPA MMSGNQMSGL NASPCQDMAS LHPLQQLVLV PGHLQSVSQF LLSQTQPGQQ
GLQPNLLPFP QQQSGLLLPQ TGPGLASQAF GHPGLPGSSL EPHLEASQHL PVPKHLPSSG
GADEPSDLEE LEKFAKTFKQ RRIKLGFTQG DVGLAMGKLY GNDFSQTTIS RFEALNLSFK
NMCKLKPLLE KWLNDAESSP SDPSVSTPSS YPSLSEVFGR KRKKRTSIET NIRLTLEKRF
QDNPKPSSEE ISMIAEQLSM EKEVVRVWFC NRRQKEKRIN CPVATPIKPP VYNSRLVSPS
GSLGPLSVPP VHSTMPGTVT SSCSPGNNSR PSSPGSGLHA SSPTASQNNS KAAVNSASSF
NSSGSWYRWN HSTYLH


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