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Peroxisomal targeting signal 1 receptor (PTS1 receptor) (PTS1R) (PTS1-BP) (PXR1P) (Peroxin-5) (Peroxisomal C-terminal targeting signal import receptor) (Peroxisome receptor 1)

 PEX5_MOUSE              Reviewed;         639 AA.
O09012; Q3UM58; Q8K2V5; Q91YC7;
01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
03-APR-2007, sequence version 2.
22-NOV-2017, entry version 153.
RecName: Full=Peroxisomal targeting signal 1 receptor;
Short=PTS1 receptor;
Short=PTS1R;
AltName: Full=PTS1-BP;
AltName: Full=PXR1P;
AltName: Full=Peroxin-5;
AltName: Full=Peroxisomal C-terminal targeting signal import receptor;
AltName: Full=Peroxisome receptor 1;
Name=Pex5; Synonyms=Pxr1;
Mus musculus (Mouse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
NCBI_TaxID=10090;
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
PubMed=9288097; DOI=10.1038/ng0997-49;
Baes M.I., Gressens P., Baumgart E., Carmeliet P., Casteels M.,
Fransen M., Evrard P., Fahimi D., Declercq P., Collen D.,
Vanveldhoven P., Mannaerts G.P.;
"A mouse model for Zellweger syndrome.";
Nat. Genet. 17:49-57(1997).
[2]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2).
Van Veldhoven P.P.;
"Studies on mammalian peroxines.";
Submitted (OCT-2001) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
TISSUE=Mammary gland;
PubMed=16141072; DOI=10.1126/science.1112014;
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M.,
Davis M.J., Wilming L.G., Aidinis V., Allen J.E.,
Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L.,
Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M.,
Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R.,
Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G.,
di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G.,
Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M.,
Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N.,
Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T.,
Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H.,
Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K.,
Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J.,
Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L.,
Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K.,
Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P.,
Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O.,
Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G.,
Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M.,
Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B.,
Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K.,
Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A.,
Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K.,
Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C.,
Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J.,
Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y.,
Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T.,
Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N.,
Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N.,
Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S.,
Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J.,
Hayashizaki Y.;
"The transcriptional landscape of the mammalian genome.";
Science 309:1559-1563(2005).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
STRAIN=FVB/N; TISSUE=Mammary tumor;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[5]
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
TISSUE=Brain, Brown adipose tissue, Kidney, Liver, Lung, Pancreas,
Spleen, and Testis;
PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
"A tissue-specific atlas of mouse protein phosphorylation and
expression.";
Cell 143:1174-1189(2010).
-!- FUNCTION: Binds to the C-terminal PTS1-type tripeptide peroxisomal
targeting signal (SKL-type) and plays an essential role in
peroxisomal protein import.
-!- SUBUNIT: Interacts with PEX7, PEX12, PEX13 and PEX14. Interacts
(Cys-linked ubiquitinated) with ZFAND6 (By similarity).
{ECO:0000250}.
-!- SUBCELLULAR LOCATION: Cytoplasm. Peroxisome membrane; Peripheral
membrane protein. Note=Its distribution appears to be dynamic. It
is probably a cycling receptor found mainly in the cytoplasm and
as well associated to the peroxisomal membrane through a docking
factor (PEX13).
-!- ALTERNATIVE PRODUCTS:
Event=Alternative splicing; Named isoforms=2;
Name=1; Synonyms=Long;
IsoId=O09012-1; Sequence=Displayed;
Name=2;
IsoId=O09012-2; Sequence=VSP_024107;
-!- PTM: Monoubiquitination at Cys-11 is required for proper export
from peroxisomes and recycling. {ECO:0000250}.
-!- SIMILARITY: Belongs to the peroxisomal targeting signal receptor
family. {ECO:0000305}.
-----------------------------------------------------------------------
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EMBL; Z97018; CAB09694.1; -; mRNA.
EMBL; AJ416473; CAC94925.1; -; mRNA.
EMBL; AK088886; BAC40632.1; -; mRNA.
EMBL; AK145111; BAE26240.1; -; mRNA.
EMBL; AK145361; BAE26388.1; -; mRNA.
EMBL; AK161470; BAE36414.1; -; mRNA.
EMBL; BC029748; AAH29748.1; -; mRNA.
CCDS; CCDS20517.1; -. [O09012-1]
CCDS; CCDS20518.1; -. [O09012-2]
RefSeq; NP_001264259.1; NM_001277330.1. [O09012-2]
RefSeq; NP_001264734.1; NM_001277805.1. [O09012-1]
RefSeq; NP_033021.2; NM_008995.2. [O09012-1]
RefSeq; NP_787947.1; NM_175933.2. [O09012-2]
RefSeq; XP_006505821.1; XM_006505758.3. [O09012-1]
RefSeq; XP_006505822.1; XM_006505759.3. [O09012-1]
RefSeq; XP_017176951.1; XM_017321462.1. [O09012-2]
UniGene; Mm.22418; -.
ProteinModelPortal; O09012; -.
SMR; O09012; -.
IntAct; O09012; 2.
STRING; 10090.ENSMUSP00000049132; -.
TCDB; 3.A.20.1.1; the peroxisomal protein importer (ppi) family.
iPTMnet; O09012; -.
PhosphoSitePlus; O09012; -.
MaxQB; O09012; -.
PaxDb; O09012; -.
PeptideAtlas; O09012; -.
PRIDE; O09012; -.
Ensembl; ENSMUST00000035861; ENSMUSP00000049132; ENSMUSG00000005069. [O09012-1]
Ensembl; ENSMUST00000080557; ENSMUSP00000079398; ENSMUSG00000005069. [O09012-2]
Ensembl; ENSMUST00000112531; ENSMUSP00000108150; ENSMUSG00000005069. [O09012-2]
Ensembl; ENSMUST00000112532; ENSMUSP00000108151; ENSMUSG00000005069. [O09012-1]
GeneID; 19305; -.
KEGG; mmu:19305; -.
UCSC; uc009dqs.1; mouse. [O09012-1]
UCSC; uc009dqt.1; mouse. [O09012-2]
CTD; 5830; -.
MGI; MGI:1098808; Pex5.
eggNOG; KOG1125; Eukaryota.
eggNOG; ENOG410XQ6Q; LUCA.
GeneTree; ENSGT00390000013941; -.
HOGENOM; HOG000158146; -.
HOVERGEN; HBG053575; -.
InParanoid; O09012; -.
KO; K13342; -.
OMA; DYNEADW; -.
OrthoDB; EOG091G07HM; -.
PhylomeDB; O09012; -.
TreeFam; TF315044; -.
Reactome; R-MMU-8866654; E3 ubiquitin ligases ubiquitinate target proteins.
PRO; PR:O09012; -.
Proteomes; UP000000589; Chromosome 6.
Bgee; ENSMUSG00000005069; -.
CleanEx; MM_PEX5; -.
ExpressionAtlas; O09012; baseline and differential.
Genevisible; O09012; MM.
GO; GO:0005737; C:cytoplasm; ISO:MGI.
GO; GO:0005829; C:cytosol; ISO:MGI.
GO; GO:0005794; C:Golgi apparatus; ISO:MGI.
GO; GO:0005622; C:intracellular; IEA:GOC.
GO; GO:0016020; C:membrane; ISO:MGI.
GO; GO:0005739; C:mitochondrion; IEA:GOC.
GO; GO:0005782; C:peroxisomal matrix; ISO:MGI.
GO; GO:0005778; C:peroxisomal membrane; ISO:MGI.
GO; GO:0005777; C:peroxisome; ISO:MGI.
GO; GO:0043234; C:protein complex; ISO:MGI.
GO; GO:0019899; F:enzyme binding; ISO:MGI.
GO; GO:0005052; F:peroxisome matrix targeting signal-1 binding; ISS:UniProtKB.
GO; GO:0000268; F:peroxisome targeting sequence binding; ISO:MGI.
GO; GO:0008022; F:protein C-terminus binding; ISS:UniProtKB.
GO; GO:0047485; F:protein N-terminus binding; ISO:MGI.
GO; GO:0031267; F:small GTPase binding; ISO:MGI.
GO; GO:0048468; P:cell development; IMP:MGI.
GO; GO:0044255; P:cellular lipid metabolic process; IMP:MGI.
GO; GO:0021795; P:cerebral cortex cell migration; IMP:MGI.
GO; GO:0021895; P:cerebral cortex neuron differentiation; IMP:MGI.
GO; GO:0007029; P:endoplasmic reticulum organization; IMP:MGI.
GO; GO:0006635; P:fatty acid beta-oxidation; IMP:MGI.
GO; GO:0007006; P:mitochondrial membrane organization; IMP:MGI.
GO; GO:0007005; P:mitochondrion organization; IMP:MGI.
GO; GO:1901094; P:negative regulation of protein homotetramerization; ISO:MGI.
GO; GO:0050905; P:neuromuscular process; IMP:MGI.
GO; GO:0001764; P:neuron migration; IMP:MGI.
GO; GO:0007031; P:peroxisome organization; IDA:MGI.
GO; GO:0040018; P:positive regulation of multicellular organism growth; IMP:MGI.
GO; GO:0016558; P:protein import into peroxisome matrix; IMP:UniProtKB.
GO; GO:0016560; P:protein import into peroxisome matrix, docking; ISO:MGI.
GO; GO:0016561; P:protein import into peroxisome matrix, translocation; ISO:MGI.
GO; GO:0045046; P:protein import into peroxisome membrane; ISO:MGI.
GO; GO:0006625; P:protein targeting to peroxisome; ISS:UniProtKB.
GO; GO:0051262; P:protein tetramerization; ISO:MGI.
GO; GO:0000038; P:very long-chain fatty acid metabolic process; IMP:MGI.
Gene3D; 1.20.960.10; -; 1.
Gene3D; 1.25.40.10; -; 2.
InterPro; IPR024113; PTS1R.
InterPro; IPR024111; PTS1R_family.
InterPro; IPR023392; Tom20_dom_sf.
InterPro; IPR013026; TPR-contain_dom.
InterPro; IPR011990; TPR-like_helical_dom_sf.
InterPro; IPR019734; TPR_repeat.
PANTHER; PTHR10130; PTHR10130; 1.
PANTHER; PTHR10130:SF2; PTHR10130:SF2; 1.
SMART; SM00028; TPR; 4.
SUPFAM; SSF48452; SSF48452; 1.
PROSITE; PS50005; TPR; 5.
PROSITE; PS50293; TPR_REGION; 1.
1: Evidence at protein level;
Alternative splicing; Complete proteome; Cytoplasm; Membrane;
Peroxisome; Phosphoprotein; Protein transport; Reference proteome;
Repeat; Thioester bond; TPR repeat; Transport; Ubl conjugation.
CHAIN 1 639 Peroxisomal targeting signal 1 receptor.
/FTId=PRO_0000106306.
REPEAT 337 370 TPR 1.
REPEAT 371 404 TPR 2.
REPEAT 405 438 TPR 3.
REPEAT 452 485 TPR 4.
REPEAT 488 521 TPR 5.
REPEAT 522 555 TPR 6.
REPEAT 556 589 TPR 7.
MOD_RES 115 115 Phosphoserine.
{ECO:0000250|UniProtKB:P50542}.
MOD_RES 153 153 Phosphoserine.
{ECO:0000250|UniProtKB:P50542}.
MOD_RES 155 155 Phosphoserine.
{ECO:0000250|UniProtKB:P50542}.
MOD_RES 167 167 Phosphoserine.
{ECO:0000250|UniProtKB:P50542}.
MOD_RES 281 281 Phosphoserine.
{ECO:0000250|UniProtKB:P50542}.
CROSSLNK 11 11 Glycyl cysteine thioester (Cys-Gly)
(interchain with G-Cter in ubiquitin).
{ECO:0000250}.
VAR_SEQ 216 252 Missing (in isoform 2).
{ECO:0000303|PubMed:16141072,
ECO:0000303|Ref.2}.
/FTId=VSP_024107.
CONFLICT 139 139 D -> H (in Ref. 1; CAB09694).
{ECO:0000305}.
CONFLICT 150 150 D -> G (in Ref. 1; CAB09694).
{ECO:0000305}.
CONFLICT 179 179 S -> F (in Ref. 1; CAB09694).
{ECO:0000305}.
CONFLICT 207 207 D -> N (in Ref. 1; CAB09694).
{ECO:0000305}.
CONFLICT 366 366 Q -> R (in Ref. 1; CAB09694).
{ECO:0000305}.
CONFLICT 370 370 H -> N (in Ref. 1; CAB09694).
{ECO:0000305}.
CONFLICT 376 376 Y -> S (in Ref. 1; CAB09694).
{ECO:0000305}.
CONFLICT 473 473 D -> E (in Ref. 2; BAE26240).
{ECO:0000305}.
CONFLICT 524 524 M -> L (in Ref. 2; BAE26240).
{ECO:0000305}.
SEQUENCE 639 AA; 70756 MW; A7013FF02926803C CRC64;
MAMRELVEGE CGGANPLMKL ATHFTQDKAL RQEGLRPGPW PPGASAAETV SKPLGVGTED
ELVSEFLQDQ NATLVSRAPQ TFKMDDLLAE MQEIEQSNFR QAPQRAPGVA DLALSENWAQ
EFLAAGDAVD VAQDYNETDW SQEFIAEVTD PLSVSPARWA EEYLEQSEEK LWLGDQEGSS
TADRWYDEYH PEEDLQHTAS DFVSKVDDPK LANSEFLKFV RQIGEGQVSL ESAAGSGGAQ
AEQWAAEFIQ QQGTSEAWVD QFTRPGNKIA ALQVEFERAK SAIESDVDFW DKLQAELEEM
AKRDAEAHPW LSDYDDLTSA SYDKGYQFEE ENPLRDHPQP FEEGLHRLEE GDLPNAVLLF
EAAVQQDPKH MEAWQYLGTT QAENEQELLA ISALRRCLEL KPDNRTALMA LAVSFTNESL
QRQACETLRD WLRYSPAYAH LVAPGEEGAT GAGPSKRILG SLLSDSLFLE VKDLFLAAVR
LDPTSIDPDV QCGLGVLFNL SGEYDKAVDC FTAALSVRPN DYLMWNKLGA TLANGNQSEE
AVAAYRRALE LQPGYIRSRY NLGISCINLG AHREAVEHFL EALNMQRKSR GPRGEGGAMS
ENIWSTLRLA LSMLGQSDAY GAADARDLSA LLAMFGLPQ


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