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Photosystem II CP43 reaction center protein (PSII 43 kDa protein) (Protein CP-43)

 PSBC_ARATH              Reviewed;         473 AA.
P56778;
30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
25-JAN-2012, sequence version 3.
28-MAR-2018, entry version 128.
RecName: Full=Photosystem II CP43 reaction center protein {ECO:0000255|HAMAP-Rule:MF_01496};
AltName: Full=PSII 43 kDa protein {ECO:0000255|HAMAP-Rule:MF_01496};
AltName: Full=Protein CP-43 {ECO:0000255|HAMAP-Rule:MF_01496};
Flags: Precursor;
Name=psbC {ECO:0000255|HAMAP-Rule:MF_01496}; Synonyms=CP43;
OrderedLocusNames=AtCg00280;
Arabidopsis thaliana (Mouse-ear cress).
Plastid; Chloroplast.
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=10574454; DOI=10.1093/dnares/6.5.283;
Sato S., Nakamura Y., Kaneko T., Asamizu E., Tabata S.;
"Complete structure of the chloroplast genome of Arabidopsis
thaliana.";
DNA Res. 6:283-290(1999).
[2]
SEQUENCE REVISION TO N-TERMINUS.
Nakamura Y.;
Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases.
[3]
PROTEIN SEQUENCE OF 15-26, SUBCELLULAR LOCATION, DEAMIDATION AT
ASN-18, PHOSPHORYLATION AT THR-15, AND ACETYLATION AT THR-15.
STRAIN=cv. Columbia;
PubMed=11113141; DOI=10.1074/jbc.M009394200;
Vener A.V., Harms A., Sussman M.R., Vierstra R.D.;
"Mass spectrometric resolution of reversible protein phosphorylation
in photosynthetic membranes of Arabidopsis thaliana.";
J. Biol. Chem. 276:6959-6966(2001).
[4]
INTERACTION WITH LPA2, AND SUBUNIT.
PubMed=17601825; DOI=10.1105/tpc.107.050526;
Ma J., Peng L., Guo J., Lu Q., Lu C., Zhang L.;
"LPA2 is required for efficient assembly of photosystem II in
Arabidopsis thaliana.";
Plant Cell 19:1980-1993(2007).
[5]
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
STRAIN=cv. Columbia;
PubMed=19245862; DOI=10.1016/j.jprot.2009.02.004;
Jones A.M.E., MacLean D., Studholme D.J., Serna-Sanz A.,
Andreasson E., Rathjen J.P., Peck S.C.;
"Phosphoproteomic analysis of nuclei-enriched fractions from
Arabidopsis thaliana.";
J. Proteomics 72:439-451(2009).
[6]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-15, AND IDENTIFICATION
BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
PubMed=19376835; DOI=10.1104/pp.109.138677;
Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A.,
Grossmann J., Gruissem W., Baginsky S.;
"Large-scale Arabidopsis phosphoproteome profiling reveals novel
chloroplast kinase substrates and phosphorylation networks.";
Plant Physiol. 150:889-903(2009).
[7]
INTERACTION WITH PAM68, AND SUBUNIT.
PubMed=20923938; DOI=10.1105/tpc.110.077453;
Armbruster U., Zuhlke J., Rengstl B., Kreller R., Makarenko E.,
Ruhle T., Schunemann D., Jahns P., Weisshaar B., Nickelsen J.,
Leister D.;
"The Arabidopsis thylakoid protein PAM68 is required for efficient D1
biogenesis and photosystem II assembly.";
Plant Cell 22:3439-3460(2010).
[8]
INTERACTION WITH LPA3, AND SUBUNIT.
PubMed=20605914; DOI=10.1104/pp.110.159558;
Cai W., Ma J., Chi W., Zou M., Guo J., Lu C., Zhang L.;
"Cooperation of LPA3 and LPA2 is essential for photosystem II assembly
in Arabidopsis.";
Plant Physiol. 154:109-120(2010).
[9]
ACETYLATION [LARGE SCALE ANALYSIS] AT THR-15, CLEAVAGE OF PROPEPTIDE
[LARGE SCALE ANALYSIS] AFTER GLU-14, AND IDENTIFICATION BY MASS
SPECTROMETRY [LARGE SCALE ANALYSIS].
PubMed=22223895; DOI=10.1074/mcp.M111.015131;
Bienvenut W.V., Sumpton D., Martinez A., Lilla S., Espagne C.,
Meinnel T., Giglione C.;
"Comparative large-scale characterisation of plant vs. mammal proteins
reveals similar and idiosyncratic N-alpha acetylation features.";
Mol. Cell. Proteomics 11:M111.015131-M111.015131(2012).
[10]
INTERACTION WITH HHL1.
PubMed=24632535; DOI=10.1105/tpc.113.122424;
Jin H., Liu B., Luo L., Feng D., Wang P., Liu J., Da Q., He Y., Qi K.,
Wang J., Wang H.B.;
"HYPERSENSITIVE TO HIGH LIGHT1 interacts with LOW QUANTUM YIELD OF
PHOTOSYSTEM II1 and functions in protection of photosystem II from
photodamage in Arabidopsis.";
Plant Cell 26:1213-1229(2014).
-!- FUNCTION: One of the components of the core complex of photosystem
II (PSII). It binds chlorophyll and helps catalyze the primary
light-induced photochemical processes of PSII. PSII is a light-
driven water:plastoquinone oxidoreductase, using light energy to
abstract electrons from H(2)O, generating O(2) and a proton
gradient subsequently used for ATP formation. {ECO:0000255|HAMAP-
Rule:MF_01496}.
-!- COFACTOR:
Note=Binds multiple chlorophylls and provides some of the ligands
for the Ca-4Mn-5O cluster of the oxygen-evolving complex. It may
also provide a ligand for a Cl- that is required for oxygen
evolution. PSII binds additional chlorophylls, carotenoids and
specific lipids. {ECO:0000255|HAMAP-Rule:MF_01496};
-!- SUBUNIT: PSII is composed of 1 copy each of membrane proteins
PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL,
PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral
proteins of the oxygen-evolving complex and a large number of
cofactors. It forms dimeric complexes (By similarity). Interacts
with PAM68, LPA2 and LPA3. Interacts with HHL1 (PubMed:24632535).
{ECO:0000255|HAMAP-Rule:MF_01496, ECO:0000269|PubMed:17601825,
ECO:0000269|PubMed:20605914, ECO:0000269|PubMed:20923938,
ECO:0000269|PubMed:24632535}.
-!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane
{ECO:0000255|HAMAP-Rule:MF_01496, ECO:0000269|PubMed:11113141};
Multi-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_01496,
ECO:0000305}.
-!- PTM: Phosphorylation occurs in normal plant growth light
conditions. Rapid dephosphorylation occurs during heat shock.
{ECO:0000269|PubMed:11113141}.
-!- MISCELLANEOUS: The assembly of PsbC into photosystem II complex
requires the presence of LPA2 and LPA3.
{ECO:0000269|PubMed:17601825, ECO:0000269|PubMed:20605914}.
-!- SIMILARITY: Belongs to the PsbB/PsbC family. PsbC subfamily.
{ECO:0000255|HAMAP-Rule:MF_01496}.
-!- SEQUENCE CAUTION:
Sequence=BAA84381.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
-----------------------------------------------------------------------
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EMBL; AP000423; BAA84381.2; ALT_SEQ; Genomic_DNA.
RefSeq; NP_051055.1; NC_000932.1.
PDB; 5MDX; EM; 5.30 A; C/c=15-473.
PDBsum; 5MDX; -.
ProteinModelPortal; P56778; -.
SMR; P56778; -.
BioGrid; 29972; 6.
IntAct; P56778; 1.
MINT; P56778; -.
STRING; 3702.ATCG00280.1; -.
iPTMnet; P56778; -.
PaxDb; P56778; -.
PRIDE; P56778; -.
EnsemblPlants; ATCG00280.1; ATCG00280.1; ATCG00280.
GeneID; 844773; -.
Gramene; ATCG00280.1; ATCG00280.1; ATCG00280.
KEGG; ath:ArthCp018; -.
Araport; ATCG00280; -.
TAIR; locus:504954652; ATCG00280.
eggNOG; ENOG410IEKR; Eukaryota.
eggNOG; ENOG410XQVF; LUCA.
HOGENOM; HOG000111335; -.
InParanoid; P56778; -.
KO; K02705; -.
OMA; FIWNGEA; -.
OrthoDB; EOG093604CQ; -.
BioCyc; MetaCyc:ATCG00280-MONOMER; -.
PRO; PR:P56778; -.
Proteomes; UP000006548; Chloroplast.
ExpressionAtlas; P56778; baseline and differential.
Genevisible; P56778; AT.
GO; GO:0009507; C:chloroplast; IDA:TAIR.
GO; GO:0009533; C:chloroplast stromal thylakoid; IDA:TAIR.
GO; GO:0009534; C:chloroplast thylakoid; IDA:TAIR.
GO; GO:0009535; C:chloroplast thylakoid membrane; IDA:TAIR.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0016020; C:membrane; IDA:TAIR.
GO; GO:0009539; C:photosystem II reaction center; TAS:TAIR.
GO; GO:0010287; C:plastoglobule; IDA:TAIR.
GO; GO:0009579; C:thylakoid; IDA:TAIR.
GO; GO:0016168; F:chlorophyll binding; IEA:UniProtKB-KW.
GO; GO:0045156; F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; IEA:InterPro.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0009772; P:photosynthetic electron transport in photosystem II; IEA:InterPro.
GO; GO:0018298; P:protein-chromophore linkage; IEA:UniProtKB-KW.
HAMAP; MF_01496; PSII_PsbC_CP43; 1.
InterPro; IPR000932; PS_antenna-like.
InterPro; IPR036001; PS_II_antenna-like_sf.
InterPro; IPR005869; PSII_PsbC.
PANTHER; PTHR33180; PTHR33180; 1.
Pfam; PF00421; PSII; 1.
SUPFAM; SSF161077; SSF161077; 1.
TIGRFAMs; TIGR01153; psbC; 1.
1: Evidence at protein level;
3D-structure; Acetylation; Chlorophyll; Chloroplast; Chromophore;
Complete proteome; Direct protein sequencing; Manganese; Membrane;
Metal-binding; Phosphoprotein; Photosynthesis; Photosystem II;
Plastid; Reference proteome; Thylakoid; Transmembrane;
Transmembrane helix.
PROPEP 1 14 {ECO:0000244|PubMed:22223895,
ECO:0000255|HAMAP-Rule:MF_01496,
ECO:0000269|PubMed:11113141}.
/FTId=PRO_0000029428.
CHAIN 15 473 Photosystem II CP43 reaction center
protein. {ECO:0000255|HAMAP-
Rule:MF_01496}.
/FTId=PRO_0000029429.
TRANSMEM 73 88 Helical. {ECO:0000255|HAMAP-
Rule:MF_01496}.
TRANSMEM 139 153 Helical. {ECO:0000255|HAMAP-
Rule:MF_01496}.
TRANSMEM 180 196 Helical. {ECO:0000255|HAMAP-
Rule:MF_01496}.
TRANSMEM 262 276 Helical. {ECO:0000255|HAMAP-
Rule:MF_01496}.
TRANSMEM 292 307 Helical. {ECO:0000255|HAMAP-
Rule:MF_01496}.
TRANSMEM 452 468 Helical. {ECO:0000255|HAMAP-
Rule:MF_01496}.
METAL 367 367 Calcium-manganese-oxide [Ca-4Mn-5O];
manganese 2. {ECO:0000255|HAMAP-
Rule:MF_01496}.
METAL 367 367 Calcium-manganese-oxide [Ca-4Mn-5O];
manganese 3. {ECO:0000255|HAMAP-
Rule:MF_01496}.
MOD_RES 15 15 N-acetylthreonine.
{ECO:0000244|PubMed:22223895,
ECO:0000255|HAMAP-Rule:MF_01496,
ECO:0000269|PubMed:11113141}.
MOD_RES 15 15 Phosphothreonine.
{ECO:0000244|PubMed:19376835,
ECO:0000255|HAMAP-Rule:MF_01496,
ECO:0000269|PubMed:11113141}.
MOD_RES 18 18 Deamidated asparagine.
{ECO:0000269|PubMed:11113141}.
SEQUENCE 473 AA; 51868 MW; 1AF08B5C4270126C CRC64;
MKTLYSLRRF YHVETLFNGT LALAGRDQET TGFAWWAGNA RLINLSGKLL GAHVAHAGLI
VFWAGAMNLF EVAHFVPEKP MYEQGLILLP HLATLGWGVG PGGEVIDTFP YFVSGVLHLI
SSAVLGFGGI YHALLGPETL EESFPFFGYV WKDRNKMTTI LGIHLILLGV GAFLLVFKAL
YFGGVYDTWA PGGGDVRKIT NLTLSPSVIF GYLLKSPFGG EGWIVSVDDL EDIIGGHVWL
GSICIFGGIW HILTKPFAWA RRALVWSGEA YLSYSLAALS VCGFIACCFV WFNNTAYPSE
FYGPTGPEAS QAQAFTFLVR DQRLGANVGS AQGPTGLGKY LMRSPTGEVI FGGETMRFWD
LRAPWLEPLR GPNGLDLSRL KKDIQPWQER RSAEYMTHAP LGSLNSVGGV ATEINAVNYV
SPRSWLSTSH FVLGFFLFVG HLWHAGRARA AAAGFEKGID RDFEPVLSMT PLN


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AS06 167 Antibody: PsbP | 23 kDa protein of the oxygen evolving complex (OEC) of PSII, Immunogen: KLH-conjugated synthetic peptidederived from PsbP protein of Arabidopsis thaliana Q42029, Host: rabbit, polyclo 100
AS07 273 Antibody: Ycf3 | Photosystem I assembly protein ycf3, Immunogen: full length recombinant ycf3 protein of Chlamydomonas reinhardtii O20031, as described in Boudreau et al. 1997, Host: rabbit, polyclona 200
AS07 274 Antibody: Ycf4 | photosystem I assembly protein ycf4, Immunogen: full length recombinant ycf4 protein of Chlamydomonas reinhardtii O20030 as described in Boudreau et al. 1997, Host: rabbit, polyclonal 200
AS08 305 Antibody: PsbP | 23 kDa protein of the oxygen evolving complex (OEC) of PSII, Immunogen: recombinant sorghum OE23 protein, Host: rabbit, polyclonal, Confirmed reactivity: Arabidopsis thaliana, Sorghum 100
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