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Probable NOT transcription complex subunit VIP2 (Protein VIRE2 INTERACTING PROTEIN2) (NbVIP2) (Fragment)

 VIP2_NICBE              Reviewed;         603 AA.
Q52JK6;
08-MAR-2011, integrated into UniProtKB/Swiss-Prot.
24-MAY-2005, sequence version 1.
15-MAR-2017, entry version 25.
RecName: Full=Probable NOT transcription complex subunit VIP2;
AltName: Full=Protein VIRE2 INTERACTING PROTEIN2;
Short=NbVIP2;
Flags: Fragment;
Name=VIP2;
Nicotiana benthamiana.
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; asterids; lamiids; Solanales; Solanaceae;
Nicotianoideae; Nicotianeae; Nicotiana.
NCBI_TaxID=4100;
[1]
NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, DISRUPTION PHENOTYPE,
INTERACTION WITH AGROBACTERIUM VIRE2, AND INDUCTION BY AGROBACTERIUM.
PubMed=17496122; DOI=10.1105/tpc.106.042903;
Anand A., Krichevsky A., Schornack S., Lahaye T., Tzfira T., Tang Y.,
Citovsky V., Mysore K.S.;
"Arabidopsis VIRE2 INTERACTING PROTEIN2 is required for Agrobacterium
T-DNA integration in plants.";
Plant Cell 19:1695-1708(2007).
-!- FUNCTION: Transcriptional regulator required for Agrobacterium-
mediated stable genetic transformation by T-DNA integration in
host genome, but not for T-DNA transient expression.
{ECO:0000269|PubMed:17496122}.
-!- SUBUNIT: Binds to VIP1 (By similarity). Interacts with
Agrobacterium tumefaciens VirE2. Forms a complex made of
Agrobacterium VirE2, VIP1, VIP2 and single-stranded DNA (ssDNA).
{ECO:0000250, ECO:0000269|PubMed:17496122}.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
-!- INDUCTION: Upon infection with a T-DNA transfer-competent
Agrobacterium strain. {ECO:0000269|PubMed:17496122}.
-!- DISRUPTION PHENOTYPE: Impaired stable genetic transformation by
Agrobacterium T-DNA. {ECO:0000269|PubMed:17496122}.
-!- SIMILARITY: Belongs to the CNOT2/3/5 family. {ECO:0000305}.
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EMBL; DQ000202; AAY15746.1; -; mRNA.
SMR; Q52JK6; -.
GO; GO:0005634; C:nucleus; ISS:UniProtKB.
GO; GO:0015074; P:DNA integration; IMP:UniProtKB.
GO; GO:0006355; P:regulation of transcription, DNA-templated; ISS:UniProtKB.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
InterPro; IPR007282; NOT.
Pfam; PF04153; NOT2_3_5; 1.
1: Evidence at protein level;
Crown gall tumor; Nucleus; Transcription; Transcription regulation.
CHAIN <1 603 Probable NOT transcription complex
subunit VIP2.
/FTId=PRO_0000405595.
COMPBIAS 47 139 Gly-rich.
COMPBIAS 389 426 Gln-rich.
NON_TER 1 1
SEQUENCE 603 AA; 64702 MW; 6A11D4813E8BD84D CRC64;
MQGTLTSRNT AINNVPSSGV QQSGNNLSGG RFVPNNLPSA LSQIPQGNSH GHSGMTSRGG
TSVVGNPGYS SNTNGVGGSI PGILPTFAAI GNRSSVPGLG VSPILGNAGP RMTNSVGNIV
GGGNIGRSIS SGAGLSVPGL ASRLNMNANS GSGNLNVQGP NRLMSGVLQQ ASPQVLSMLG
NSYPAGGPLS QNHVQAIGNF NSMGLLNDVN SNDGSPFDIN DFPQLSSRPS SAGGPQGQLG
SLRKQGLSPI VQQNQEFSIQ NEDFPALPGF KGGNADYAMD PHQKEQLHDN TLSMMQQQHF
SMGRSAGFNL GGTYSSNRPQ QQLQHAPSVS SGGVSFSNIN NQDLLSLHGS DVFQSSHSSY
QQQGGGPPGI GLRPLNSSGT VSGIGSYDQL IQQYQQHQGQ SQFRLQQMST LGQPFRDQSL
KSMQSQVAPD PFGMLGLLSV IRMSDPDLTS LALGIDLTTL GLNLNSAENL YKTFGSPWSD
EPAKGDPEFT VPQCYYAKQP PPLNQAYFSK FQLDTLFYIF YSMPKDEAQL YAANELYNRG
WFYHREHRLW FMRVANMEPL VKTNAYERGS YICFDPNTWE TIHKDNFVLH CEMLEKRPVL
PQH


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