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Probable aquaporin NIP5-1 (NOD26-like intrinsic protein 5-1) (AtNIP5;1) (Nodulin-26-like major intrinsic protein 6) (NodLikeMip6) (Protein NLM6)

 NIP51_ARATH             Reviewed;         304 AA.
Q9SV84;
27-JUN-2003, integrated into UniProtKB/Swiss-Prot.
01-MAY-2000, sequence version 1.
07-JUN-2017, entry version 125.
RecName: Full=Probable aquaporin NIP5-1;
AltName: Full=NOD26-like intrinsic protein 5-1;
Short=AtNIP5;1;
AltName: Full=Nodulin-26-like major intrinsic protein 6;
Short=NodLikeMip6;
Short=Protein NLM6;
Name=NIP5-1; Synonyms=NLM6; OrderedLocusNames=At4g10380;
ORFNames=F24G24.180;
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=10617198; DOI=10.1038/47134;
Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G.,
Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N.,
Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M.,
Weichselgartner M., de Simone V., Obermaier B., Mache R., Mueller M.,
Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T.,
Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I.,
Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P.,
Langham S.-A., McCullagh B., Bilham L., Robben J.,
van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F.,
Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E.,
Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W.,
Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P.,
Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H.,
De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R.,
van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S.,
Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R.,
Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S.,
Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H.,
Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S.,
Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A.,
Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R.,
Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S.,
Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E.,
Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A.,
Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T.,
Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C.,
Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S.,
Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K.,
Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L.,
Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J.,
Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J.,
Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D.,
Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D.,
Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C.,
Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C.,
Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R.,
Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S.,
Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A.,
Chen E., Marra M.A., Martienssen R., McCombie W.R.;
"Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana.";
Nature 402:769-777(1999).
[2]
GENOME REANNOTATION.
STRAIN=cv. Columbia;
The Arabidopsis Information Portal (Araport);
Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
Feldmann K.A.;
"Full-length cDNA from Arabidopsis thaliana.";
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
[4]
NOMENCLATURE, AND TISSUE SPECIFICITY.
PubMed=11806824;
Quigley F., Rosenberg J.M., Shachar-Hill Y., Bohnert H.J.;
"From genome to function: the Arabidopsis aquaporins.";
Genome Biol. 3:RESEARCH0001.1-RESEARCH0001.17(2002).
[5]
FUNCTION, SUBCELLULAR LOCATION, INDUCTION, AND DISRUPTION PHENOTYPE.
PubMed=16679457; DOI=10.1105/tpc.106.041640;
Takano J., Wada M., Ludewig U., Schaaf G., von Wiren N., Fujiwara T.;
"The Arabidopsis major intrinsic protein NIP5;1 is essential for
efficient boron uptake and plant development under boron limitation.";
Plant Cell 18:1498-1509(2006).
-!- FUNCTION: Boric acid transporter. Low water transport activity.
Plays an important role as plasma membrane boric acid channel for
the boron uptake required for plant growth and development under
boron limitation. {ECO:0000269|PubMed:16679457}.
-!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:16679457};
Multi-pass membrane protein {ECO:0000269|PubMed:16679457}.
-!- TISSUE SPECIFICITY: Expressed in rosette leaves.
{ECO:0000269|PubMed:11806824}.
-!- INDUCTION: By boron limitation in the root elongation and the root
hair zones. {ECO:0000269|PubMed:16679457}.
-!- DOMAIN: Aquaporins contain two tandem repeats each containing
three membrane-spanning domains and a pore-forming loop with the
signature motif Asn-Pro-Ala/Ser/Val (NPA).
-!- DISRUPTION PHENOTYPE: Plants display lower boric acid uptake into
roots, lower biomass production, and increased sensitivity of root
and shoot development to boron deficiency.
{ECO:0000269|PubMed:16679457}.
-!- SIMILARITY: Belongs to the MIP/aquaporin (TC 1.A.8) family. NIP
(TC 1.A.8.12) subfamily. {ECO:0000305}.
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EMBL; AL049488; CAB39791.1; -; Genomic_DNA.
EMBL; AL161517; CAB78161.1; -; Genomic_DNA.
EMBL; CP002687; AEE82874.1; -; Genomic_DNA.
EMBL; AY087560; AAM65102.1; -; mRNA.
PIR; T04053; T04053.
RefSeq; NP_192776.1; NM_117106.3.
UniGene; At.33633; -.
ProteinModelPortal; Q9SV84; -.
SMR; Q9SV84; -.
STRING; 3702.AT4G10380.1; -.
TCDB; 1.A.8.12.3; the major intrinsic protein (mip) family.
PaxDb; Q9SV84; -.
EnsemblPlants; AT4G10380.1; AT4G10380.1; AT4G10380.
GeneID; 826630; -.
Gramene; AT4G10380.1; AT4G10380.1; AT4G10380.
KEGG; ath:AT4G10380; -.
Araport; AT4G10380; -.
TAIR; locus:2122829; AT4G10380.
eggNOG; KOG0223; Eukaryota.
eggNOG; COG0580; LUCA.
HOGENOM; HOG000288286; -.
InParanoid; Q9SV84; -.
KO; K09874; -.
OMA; TPRCKCL; -.
OrthoDB; EOG09360HRA; -.
PhylomeDB; Q9SV84; -.
PRO; PR:Q9SV84; -.
Proteomes; UP000006548; Chromosome 4.
ExpressionAtlas; Q9SV84; baseline and differential.
Genevisible; Q9SV84; AT.
GO; GO:0005887; C:integral component of plasma membrane; IBA:GO_Central.
GO; GO:0016328; C:lateral plasma membrane; IDA:TAIR.
GO; GO:0005886; C:plasma membrane; IDA:TAIR.
GO; GO:0015105; F:arsenite transmembrane transporter activity; IDA:TAIR.
GO; GO:0046715; F:borate transmembrane transporter activity; IDA:TAIR.
GO; GO:0080138; F:borate uptake transmembrane transporter activity; IDA:TAIR.
GO; GO:0015250; F:water channel activity; IDA:TAIR.
GO; GO:0015700; P:arsenite transport; IDA:TAIR.
GO; GO:0046713; P:borate transport; IDA:TAIR.
GO; GO:0080029; P:cellular response to boron-containing substance levels; IEP:TAIR.
GO; GO:0046685; P:response to arsenic-containing substance; IMP:TAIR.
GO; GO:0010036; P:response to boron-containing substance; IMP:TAIR.
Gene3D; 1.20.1080.10; -; 1.
InterPro; IPR023271; Aquaporin-like.
InterPro; IPR034294; Aquaporin_transptr.
InterPro; IPR000425; MIP.
InterPro; IPR022357; MIP_CS.
PANTHER; PTHR19139; PTHR19139; 1.
Pfam; PF00230; MIP; 1.
PRINTS; PR00783; MINTRINSICP.
SUPFAM; SSF81338; SSF81338; 1.
PROSITE; PS00221; MIP; 1.
2: Evidence at transcript level;
Cell membrane; Complete proteome; Membrane; Phosphoprotein;
Reference proteome; Repeat; Transmembrane; Transmembrane helix;
Transport.
CHAIN 1 304 Probable aquaporin NIP5-1.
/FTId=PRO_0000064068.
TRANSMEM 80 100 Helical; Name=1. {ECO:0000255}.
TRANSMEM 106 126 Helical; Name=2. {ECO:0000255}.
TRANSMEM 157 177 Helical; Name=3. {ECO:0000255}.
TRANSMEM 195 215 Helical; Name=4. {ECO:0000255}.
TRANSMEM 219 239 Helical; Name=5. {ECO:0000255}.
TRANSMEM 266 286 Helical; Name=6. {ECO:0000255}.
MOTIF 137 139 NPA 1.
MOTIF 248 250 NPA 2.
MOD_RES 301 301 Phosphoserine.
{ECO:0000250|UniProtKB:P43286}.
SEQUENCE 304 AA; 31493 MW; 0B7D0C626F723337 CRC64;
MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG
QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV NQKYDGAETL IGNAACAGLA
VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF
MSGGVTIPSV SLGQAFALEF IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG
PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
SFRR


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