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Probable ferric reduction oxidase 1 (AtFRO1) (EC 1.16.1.7) (Ferric-chelate reductase 1)

 FRO1_ARATH              Reviewed;         704 AA.
Q9LMM2; P92950;
19-OCT-2011, integrated into UniProtKB/Swiss-Prot.
01-OCT-2000, sequence version 1.
10-OCT-2018, entry version 107.
RecName: Full=Probable ferric reduction oxidase 1;
Short=AtFRO1;
EC=1.16.1.7;
AltName: Full=Ferric-chelate reductase 1;
Name=FRO1; OrderedLocusNames=At1g01590; ORFNames=F22L4.13;
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], AND TISSUE SPECIFICITY.
STRAIN=cv. Landsberg erecta;
PubMed=10067892; DOI=10.1038/17800;
Robinson N.J., Procter C.M., Connolly E.L., Guerinot M.L.;
"A ferric-chelate reductase for iron uptake from soils.";
Nature 397:694-697(1999).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=11130712; DOI=10.1038/35048500;
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S.,
White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y.,
Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W.,
Chung M.K., Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K.,
Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y.,
Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L.,
Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E.,
Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B.,
Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P.,
Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A.,
Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I.,
Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D.,
Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M.,
Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M.,
Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.;
"Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana.";
Nature 408:816-820(2000).
[3]
GENOME REANNOTATION.
STRAIN=cv. Columbia;
PubMed=27862469; DOI=10.1111/tpj.13415;
Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
Town C.D.;
"Araport11: a complete reannotation of the Arabidopsis thaliana
reference genome.";
Plant J. 89:789-804(2017).
[4]
TISSUE SPECIFICITY.
PubMed=16362328; DOI=10.1007/s00425-005-0165-0;
Mukherjee I., Campbell N.H., Ash J.S., Connolly E.L.;
"Expression profiling of the Arabidopsis ferric chelate reductase
(FRO) gene family reveals differential regulation by iron and
copper.";
Planta 223:1178-1190(2006).
[5]
GENE FAMILY, AND NOMENCLATURE.
DOI=10.1016/j.plantsci.2009.02.011;
Jeong J., Connolly E.L.;
"Iron uptake mechanisms in plants: Functions of the FRO family of
ferric reductases.";
Plant Sci. 176:709-714(2009).
-!- FUNCTION: Ferric chelate reductase involved in iron reduction in
roots (By similarity). May participate in the transport of
electrons to a Fe(3+) ion via FAD and heme intermediates.
{ECO:0000250}.
-!- CATALYTIC ACTIVITY: 2 Fe(II)-siderophore + NAD(+) + H(+) = 2
Fe(III)-siderophore + NADH.
-!- COFACTOR:
Name=FAD; Xref=ChEBI:CHEBI:57692; Evidence={ECO:0000305};
-!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
protein {ECO:0000305}.
-!- TISSUE SPECIFICITY: Expressed in siliques. Detected in roots.
{ECO:0000269|PubMed:10067892, ECO:0000269|PubMed:16362328}.
-!- SIMILARITY: Belongs to the ferric reductase (FRE) family.
{ECO:0000305}.
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EMBL; Y09581; CAA70769.1; -; Genomic_DNA.
EMBL; AC061957; AAF81317.1; -; Genomic_DNA.
EMBL; CP002684; AEE27309.1; -; Genomic_DNA.
PIR; F86146; F86146.
RefSeq; NP_171665.1; NM_100041.2.
ProteinModelPortal; Q9LMM2; -.
SMR; Q9LMM2; -.
STRING; 3702.AT1G01590.1; -.
PaxDb; Q9LMM2; -.
PRIDE; Q9LMM2; -.
EnsemblPlants; AT1G01590.1; AT1G01590.1; AT1G01590.
GeneID; 837194; -.
Gramene; AT1G01590.1; AT1G01590.1; AT1G01590.
KEGG; ath:AT1G01590; -.
Araport; AT1G01590; -.
TAIR; locus:2025366; AT1G01590.
eggNOG; KOG0039; Eukaryota.
eggNOG; ENOG410XNZY; LUCA.
HOGENOM; HOG000006154; -.
InParanoid; Q9LMM2; -.
KO; K00521; -.
OMA; ESTHNRN; -.
OrthoDB; EOG093603NP; -.
PhylomeDB; Q9LMM2; -.
BioCyc; ARA:AT1G01590-MONOMER; -.
Reactome; R-ATH-3299685; Detoxification of Reactive Oxygen Species.
PRO; PR:Q9LMM2; -.
Proteomes; UP000006548; Chromosome 1.
ExpressionAtlas; Q9LMM2; baseline and differential.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0000293; F:ferric-chelate reductase activity; IMP:TAIR.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0006811; P:ion transport; IEA:UniProtKB-KW.
Gene3D; 3.40.50.80; -; 2.
InterPro; IPR013112; FAD-bd_8.
InterPro; IPR017927; FAD-bd_FR_type.
InterPro; IPR013130; Fe3_Rdtase_TM_dom.
InterPro; IPR013121; Fe_red_NAD-bd_6.
InterPro; IPR039261; FNR_nucleotide-bd.
InterPro; IPR017938; Riboflavin_synthase-like_b-brl.
Pfam; PF08022; FAD_binding_8; 1.
Pfam; PF01794; Ferric_reduct; 1.
Pfam; PF08030; NAD_binding_6; 1.
SUPFAM; SSF52343; SSF52343; 1.
SUPFAM; SSF63380; SSF63380; 1.
PROSITE; PS51384; FAD_FR; 1.
2: Evidence at transcript level;
Complete proteome; Electron transport; FAD; Flavoprotein; Heme;
Ion transport; Iron; Membrane; Metal-binding; NAD; Oxidoreductase;
Reference proteome; Transmembrane; Transmembrane helix; Transport.
CHAIN 1 704 Probable ferric reduction oxidase 1.
/FTId=PRO_0000413199.
TOPO_DOM 1 16 Cytoplasmic. {ECO:0000255}.
TRANSMEM 17 36 Helical. {ECO:0000250}.
TOPO_DOM 37 62 Lumenal. {ECO:0000255}.
TRANSMEM 63 81 Helical. {ECO:0000250}.
TOPO_DOM 82 115 Cytoplasmic. {ECO:0000255}.
TRANSMEM 116 139 Helical. {ECO:0000250}.
TOPO_DOM 140 207 Lumenal. {ECO:0000255}.
TRANSMEM 208 231 Helical. {ECO:0000250}.
TOPO_DOM 232 282 Cytoplasmic. {ECO:0000255}.
TRANSMEM 283 307 Helical. {ECO:0000250}.
TOPO_DOM 308 329 Lumenal. {ECO:0000255}.
TRANSMEM 330 350 Helical. {ECO:0000250}.
TOPO_DOM 351 550 Cytoplasmic. {ECO:0000255}.
TRANSMEM 551 573 Helical. {ECO:0000250}.
TOPO_DOM 574 592 Lumenal. {ECO:0000255}.
TRANSMEM 593 614 Helical. {ECO:0000250}.
TOPO_DOM 615 704 Cytoplasmic. {ECO:0000255}.
DOMAIN 174 294 Ferric oxidoreductase.
DOMAIN 323 430 FAD-binding FR-type.
{ECO:0000255|PROSITE-ProRule:PRU00716}.
NP_BIND 372 375 FAD. {ECO:0000255}.
NP_BIND 422 425 NAD. {ECO:0000255}.
COMPBIAS 406 410 Poly-Ser.
METAL 209 209 Iron (heme axial ligand). {ECO:0000305}.
METAL 223 223 Iron (heme axial ligand). {ECO:0000305}.
METAL 284 284 Iron (heme axial ligand). {ECO:0000305}.
METAL 297 297 Iron (heme axial ligand). {ECO:0000305}.
CONFLICT 443 443 G -> A (in Ref. 1; CAA70769).
{ECO:0000305}.
SEQUENCE 704 AA; 79600 MW; DB027A91FD282DD9 CRC64;
MGVGEMNKEV IDKVIKFLMM VILMGTIVIW IMMPTSTYKE IWLTSMRAKL GKSIYYGRPG
VNLLVYMFPM ILLAFLGCIY LHLKKSTTVN QFNSGVEKKR AKFGALRRPM LVNGPLGIVT
VTEVMFLTMF MALLLWSLAN YMYRTFVNVT SESAATDGNN LWQARLDLIA VRIGIVGNIC
LAFLFYPVAR GSSLLAAVGL TSESSIKYHI WLGHLVMIIF TSHGLCYFIY WISKNQLVSK
MLEWDRTAVS NLAGEIALVA GLMMWVTTYP KIRRRLFEVF FYSHYLYIVF MLFFVFHVGI
SHALIPLPGF YIFLVDRFLR FLQSRNNVKL VSARVLPCDT VELNFSKNPM LMYSPTSTMF
VNIPSISKLQ WHPFTIISSS KLEPETLSVM IKSQGKWSTK LYDMLSSSSS DQINRLAVSV
EGPYGPSSTD FLRHESLVMV SGGSGITPFI SIVRDLFYMS STHKCKIPKM TLICAFKNSS
DLSMLDLILP TSGLTTDMAS FVDIQIKAFV TREEKTSVKE STHNRNIIKT RHFKPNVSDQ
PISPILGPNS WLCLAAILSS SFMIFIVIIA IITRYHIHPI DQNSEKYTWA YKSLIYLVSI
SITVVTTSTA AMLWNKKKYY AKNDQYVDNL SPVIIESSPQ QLISQSTDIH YGERPNLNKL
LVGLKGSSVG ILVCGPKKMR QKVAKICSFG SAENLHFESI SFSW


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