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Probable histone chaperone ASF1A (Anti-silencing function protein 1-like protein a) (Anti-silencing function 1a protein) (S-locus protein 7) (AtSP7) (Silencing group A protein 2)

 ASF1A_ARATH             Reviewed;         196 AA.
09-JAN-2007, integrated into UniProtKB/Swiss-Prot.
01-JUN-2001, sequence version 1.
25-OCT-2017, entry version 102.
RecName: Full=Probable histone chaperone ASF1A;
AltName: Full=Anti-silencing function protein 1-like protein a;
Short=Anti-silencing function 1a protein;
AltName: Full=S-locus protein 7;
AltName: Full=Silencing group A protein 2;
Name=ASF1A; Synonyms=SGA2, SP7; OrderedLocusNames=At1g66740;
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
STRAIN=cv. Columbia;
Kaya H., Lee J., Araki T., Shibahara K.;
"Arabidopsis thaliana ASF1 genes.";
Submitted (JAN-2002) to the EMBL/GenBank/DDBJ databases.
STRAIN=cv. Columbia;
PubMed=11130712; DOI=10.1038/35048500;
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S.,
White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y.,
Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W.,
Chung M.K., Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K.,
Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y.,
Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L.,
Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E.,
Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B.,
Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P.,
Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A.,
Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I.,
Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D.,
Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M.,
Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M.,
Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.;
"Sequence and analysis of chromosome 1 of the plant Arabidopsis
Nature 408:816-820(2000).
STRAIN=cv. Columbia;
The Arabidopsis Information Portal (Araport);
Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
STRAIN=cv. Columbia;
PubMed=14593172; DOI=10.1126/science.1088305;
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J.,
Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F.,
Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.,
Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J.,
Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y.,
Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P.,
Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F.,
Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M.,
Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J.,
Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T.,
Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y.,
Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis
Science 302:842-846(2003).
PubMed=11759841; DOI=10.1093/dnares/8.5.215;
Takada Y., Ito A., Ninomiya C., Kakizaki T., Takahata Y., Suzuki G.,
Hatakeyama K., Hinata K., Shiba H., Takayama S., Isogai A.,
Watanabe M.;
"Characterization of expressed genes in the SLL2 region of self-
compatible Arabidopsis thaliana.";
DNA Res. 8:215-219(2001).
STRAIN=cv. Columbia;
PubMed=25086063; DOI=10.1242/bio.20148680;
Nie X., Wang H., Li J., Holec S., Berger F.;
"The HIRA complex that deposits the histone H3.3 is conserved in
Arabidopsis and facilitates transcriptional dynamics.";
Biol. Open 3:794-802(2014).
-!- FUNCTION: Histone chaperone that facilitates histone deposition
and histone exchange and removal during nucleosome assembly and
disassembly (By similarity). While encoded by a region of the
Arabidopsis thaliana genome that is homologous to the Brassica S-
locus for self incompatibility, this protein may not play the same
role in Arabidopsis thaliana. {ECO:0000250}.
-!- SUBUNIT: Interacts with histone H3 and histone H4 (By similarity).
Component of the HIRA complex made of UBN1, UBN2, ASF1A, CABIN1
and HIRA. Interacts with HIRA (PubMed:25086063). {ECO:0000250,
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:25086063}.
Nucleus, nucleolus {ECO:0000269|PubMed:25086063}. Note=Localized
at rDNA loci in the nucleolus. {ECO:0000269|PubMed:25086063}.
-!- TISSUE SPECIFICITY: Expressed in leaves and flower buds.
-!- SIMILARITY: Belongs to the ASF1 family. {ECO:0000305}.
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
Distributed under the Creative Commons Attribution-NoDerivs License
EMBL; AB078339; BAC54103.1; -; mRNA.
EMBL; AC013288; AAG60078.1; -; Genomic_DNA.
EMBL; CP002684; AEE34550.1; -; Genomic_DNA.
EMBL; AY096540; AAM20190.1; -; mRNA.
EMBL; AY065298; AAL38774.1; -; mRNA.
RefSeq; NP_176846.1; NM_105344.4.
UniGene; At.28464; -.
ProteinModelPortal; Q9C9M6; -.
SMR; Q9C9M6; -.
BioGrid; 28213; 1.
STRING; 3702.AT1G66740.1; -.
PaxDb; Q9C9M6; -.
EnsemblPlants; AT1G66740.1; AT1G66740.1; AT1G66740.
GeneID; 842992; -.
Gramene; AT1G66740.1; AT1G66740.1; AT1G66740.
KEGG; ath:AT1G66740; -.
Araport; AT1G66740; -.
TAIR; locus:2033359; AT1G66740.
eggNOG; KOG3265; Eukaryota.
eggNOG; COG5137; LUCA.
HOGENOM; HOG000197425; -.
InParanoid; Q9C9M6; -.
KO; K10753; -.
OrthoDB; EOG09360MXQ; -.
PhylomeDB; Q9C9M6; -.
PRO; PR:Q9C9M6; -.
Proteomes; UP000006548; Chromosome 1.
ExpressionAtlas; Q9C9M6; baseline and differential.
Genevisible; Q9C9M6; AT.
GO; GO:0005737; C:cytoplasm; IDA:TAIR.
GO; GO:0005730; C:nucleolus; IDA:UniProtKB.
GO; GO:0005634; C:nucleus; IDA:UniProtKB.
GO; GO:0030875; C:rDNA protrusion; IDA:UniProtKB.
GO; GO:0051301; P:cell division; IMP:TAIR.
GO; GO:0006333; P:chromatin assembly or disassembly; IEA:InterPro.
GO; GO:0016569; P:covalent chromatin modification; IEA:UniProtKB-KW.
GO; GO:0000724; P:double-strand break repair via homologous recombination; IMP:TAIR.
GO; GO:0031567; P:mitotic cell size control checkpoint; IMP:TAIR.
GO; GO:0008361; P:regulation of cell size; IMP:TAIR.
GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-KW.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
GO; GO:0010091; P:trichome branching; IMP:TAIR.
Gene3D;; -; 1.
InterPro; IPR006818; ASF1-like.
InterPro; IPR036747; ASF1-like_sf.
PANTHER; PTHR12040; PTHR12040; 1.
Pfam; PF04729; ASF1_hist_chap; 1.
SUPFAM; SSF101546; SSF101546; 1.
1: Evidence at protein level;
Chaperone; Chromatin regulator; Complete proteome; Nucleus;
Reference proteome; Transcription; Transcription regulation.
CHAIN 1 196 Probable histone chaperone ASF1A.
SEQUENCE 196 AA; 22133 MW; 259D9842EA77F115 CRC64;

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