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Probable xyloglucan endotransglucosylase/hydrolase protein 17 (At-XTH17) (XTH-17) (EC 2.4.1.207)

 XTH17_ARATH             Reviewed;         282 AA.
O80803;
28-NOV-2003, integrated into UniProtKB/Swiss-Prot.
01-NOV-1998, sequence version 1.
05-JUL-2017, entry version 128.
RecName: Full=Probable xyloglucan endotransglucosylase/hydrolase protein 17 {ECO:0000303|PubMed:12514239};
Short=At-XTH17 {ECO:0000303|PubMed:12514239};
Short=XTH-17 {ECO:0000303|PubMed:12514239};
EC=2.4.1.207 {ECO:0000305|PubMed:24948835};
Flags: Precursor;
Name=XTH17 {ECO:0000303|PubMed:12514239};
Synonyms=XTR1 {ECO:0000303|PubMed:11673616};
OrderedLocusNames=At1g65310 {ECO:0000312|Araport:AT1G65310};
ORFNames=T8F5.9 {ECO:0000312|EMBL:AAC27142.1};
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=11130712; DOI=10.1038/35048500;
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S.,
White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y.,
Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W.,
Chung M.K., Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K.,
Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y.,
Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L.,
Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E.,
Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B.,
Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P.,
Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A.,
Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I.,
Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D.,
Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M.,
Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M.,
Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.;
"Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana.";
Nature 408:816-820(2000).
[2]
GENOME REANNOTATION.
STRAIN=cv. Columbia;
The Arabidopsis Information Portal (Araport);
Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
PubMed=14593172; DOI=10.1126/science.1088305;
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J.,
Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F.,
Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.,
Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J.,
Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y.,
Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P.,
Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F.,
Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M.,
Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J.,
Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T.,
Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y.,
Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis
genome.";
Science 302:842-846(2003).
[4]
TISSUE SPECIFICITY, AND INDUCTION.
PubMed=11673616; DOI=10.1093/pcp/pce154;
Yokoyama R., Nishitani K.;
"A comprehensive expression analysis of all members of a gene family
encoding cell-wall enzymes allowed us to predict cis-regulatory
regions involved in cell-wall construction in specific organs of
Arabidopsis.";
Plant Cell Physiol. 42:1025-1033(2001).
[5]
NOMENCLATURE.
PubMed=12514239; DOI=10.1093/pcp/pcf171;
Rose J.K.C., Braam J., Fry S.C., Nishitani K.;
"The XTH family of enzymes involved in xyloglucan
endotransglucosylation and endohydrolysis: current perspectives and a
new unifying nomenclature.";
Plant Cell Physiol. 43:1421-1435(2002).
[6]
TISSUE SPECIFICITY.
PubMed=15659443; DOI=10.1093/pcp/pci013;
Vissenberg K., Oyama M., Osato Y., Yokoyama R., Verbelen J.P.,
Nishitani K.;
"Differential expression of AtXTH17, AtXTH18, AtXTH19 and AtXTH20
genes in Arabidopsis roots. Physiological roles in specification in
cell wall construction.";
Plant Cell Physiol. 46:192-200(2005).
[7]
FUNCTION, INTERACTION WITH XTH31, SUBCELLULAR LOCATION, AND INDUCTION
BY ALUMINUM.
PubMed=24948835; DOI=10.1104/pp.114.243790;
Zhu X.F., Wan J.X., Sun Y., Shi Y.Z., Braam J., Li G.X., Zheng S.J.;
"Xyloglucan endotransglucosylase-hydrolase17 interacts with xyloglucan
endotransglucosylase-hydrolase31 to confer xyloglucan
endotransglucosylase action and affect aluminum sensitivity in
Arabidopsis.";
Plant Physiol. 165:1566-1574(2014).
-!- FUNCTION: Catalyzes xyloglucan endohydrolysis (XEH) and/or
endotransglycosylation (XET). Cleaves and religates xyloglucan
polymers, an essential constituent of the primary cell wall, and
thereby participates in cell wall construction of growing tissues.
{ECO:0000269|PubMed:24948835}.
-!- CATALYTIC ACTIVITY: Breaks a beta-(1->4) bond in the backbone of a
xyloglucan and transfers the xyloglucanyl segment on to O-4 of the
non-reducing terminal glucose residue of an acceptor, which can be
a xyloglucan or an oligosaccharide of xyloglucan.
{ECO:0000305|PubMed:24948835}.
-!- SUBUNIT: Interacts with XTH31. The formation of an XTH17-XTH31
dimer may be required for XET activity.
{ECO:0000269|PubMed:24948835}.
-!- SUBCELLULAR LOCATION: Secreted, cell wall {ECO:0000305}. Secreted,
extracellular space, apoplast {ECO:0000305}. Cell membrane
{ECO:0000269|PubMed:24948835}.
-!- TISSUE SPECIFICITY: Root specific (PubMed:11673616). Expressed in
all cell types in the elongating and differentiating region of the
root (PubMed:15659443). {ECO:0000269|PubMed:11673616,
ECO:0000269|PubMed:15659443}.
-!- INDUCTION: Up-regulated by auxin and brassinolide
(PubMed:11673616). Down-regulated by aluminum.
{ECO:0000269|PubMed:11673616, ECO:0000269|PubMed:24948835}.
-!- PTM: Contains at least one intrachain disulfide bond essential for
its enzymatic activity. {ECO:0000250}.
-!- MISCELLANEOUS: Knockdown mutants have shorter roots, decreased
cell wall xyloglucan content and increased aluminum resistance.
{ECO:0000269|PubMed:24948835}.
-!- SIMILARITY: Belongs to the glycosyl hydrolase 16 family. XTH group
2 subfamily. {ECO:0000305}.
-----------------------------------------------------------------------
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EMBL; AC004512; AAC27142.1; -; Genomic_DNA.
EMBL; CP002684; AEE34357.1; -; Genomic_DNA.
EMBL; AF370621; AAK43940.1; -; mRNA.
PIR; T02354; T02354.
RefSeq; NP_176710.1; NM_105205.4.
UniGene; At.17100; -.
ProteinModelPortal; O80803; -.
SMR; O80803; -.
BioGrid; 28060; 1.
STRING; 3702.AT1G65310.1; -.
CAZy; GH16; Glycoside Hydrolase Family 16.
PaxDb; O80803; -.
PRIDE; O80803; -.
EnsemblPlants; AT1G65310.1; AT1G65310.1; AT1G65310.
GeneID; 842839; -.
Gramene; AT1G65310.1; AT1G65310.1; AT1G65310.
KEGG; ath:AT1G65310; -.
Araport; AT1G65310; -.
TAIR; locus:2206335; AT1G65310.
eggNOG; ENOG410IHDJ; Eukaryota.
eggNOG; COG2273; LUCA.
HOGENOM; HOG000236368; -.
InParanoid; O80803; -.
KO; K08235; -.
OMA; FPTRQPM; -.
OrthoDB; EOG093614VA; -.
PhylomeDB; O80803; -.
BioCyc; ARA:AT1G65310-MONOMER; -.
BRENDA; 2.4.1.207; 399.
PRO; PR:O80803; -.
Proteomes; UP000006548; Chromosome 1.
ExpressionAtlas; O80803; baseline and differential.
Genevisible; O80803; AT.
GO; GO:0048046; C:apoplast; IEA:UniProtKB-SubCell.
GO; GO:0009505; C:plant-type cell wall; IDA:TAIR.
GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO; GO:0004553; F:hydrolase activity, hydrolyzing O-glycosyl compounds; IEA:InterPro.
GO; GO:0016762; F:xyloglucan:xyloglucosyl transferase activity; IEA:UniProtKB-EC.
GO; GO:0042546; P:cell wall biogenesis; IEA:InterPro.
GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
GO; GO:0010411; P:xyloglucan metabolic process; IDA:TAIR.
InterPro; IPR008264; Beta_glucanase.
InterPro; IPR013320; ConA-like_dom.
InterPro; IPR000757; GH16.
InterPro; IPR008263; GH16_AS.
InterPro; IPR010713; XET_C.
InterPro; IPR016455; XTH.
Pfam; PF00722; Glyco_hydro_16; 1.
Pfam; PF06955; XET_C; 1.
PIRSF; PIRSF005604; XET; 1.
PRINTS; PR00737; GLHYDRLASE16.
SUPFAM; SSF49899; SSF49899; 1.
PROSITE; PS01034; GH16_1; 1.
PROSITE; PS51762; GH16_2; 1.
1: Evidence at protein level;
Apoplast; Cell membrane; Cell wall; Cell wall biogenesis/degradation;
Complete proteome; Disulfide bond; Glycoprotein; Glycosidase;
Hydrolase; Membrane; Reference proteome; Secreted; Signal;
Transferase.
SIGNAL 1 26 {ECO:0000255}.
CHAIN 27 282 Probable xyloglucan
endotransglucosylase/hydrolase protein
17.
/FTId=PRO_0000011817.
DOMAIN 27 218 GH16. {ECO:0000255|PROSITE-
ProRule:PRU01098}.
ACT_SITE 104 104 Nucleophile. {ECO:0000255|PROSITE-
ProRule:PRU10064}.
ACT_SITE 108 108 Proton donor. {ECO:0000255|PROSITE-
ProRule:PRU10064}.
CARBOHYD 112 112 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
SEQUENCE 282 AA; 31992 MW; 00F9732C0C44172D CRC64;
MKLSCGTSFA FLLLFLLAAQ SVHVYAGSFH KDVQIHWGDG RGKIHDRDGK LLSLSLDKSS
GSGFQSNQEF LYGKAEVQMK LVPGNSAGTV TTFYLKSPGT TWDEIDFEFL GNISGHPYTL
HTNVYTKGTG DKEQQFHLWF DPTVNFHTYC ITWNPQRIIF TVDGIPIREF KNPEAIGVPF
PTRQPMRLYA SLWEAEHWAT RGGLEKTDWS KAPFTAFYRN YNVDGCVWAN GKSSCSANSP
WFTQKLDSNG QTRMKGVQSK YMIYNYCTDK RRFPRGVPAE CT


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