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Proline-rich protein 3 (MHC class I region proline-rich protein CAT56)

 PRR3_HUMAN              Reviewed;         188 AA.
P79522; A1A4H4; Q5RJB5; Q5STN6;
15-FEB-2005, integrated into UniProtKB/Swiss-Prot.
15-FEB-2005, sequence version 2.
28-MAR-2018, entry version 135.
RecName: Full=Proline-rich protein 3;
AltName: Full=MHC class I region proline-rich protein CAT56;
Name=PRR3; Synonyms=CAT56;
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
Wei H., Weissman S.M.;
"Human proline rich sequence (CAT 56) from the MHC class I region.";
Submitted (JUL-1996) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=14574404; DOI=10.1038/nature02055;
Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L.,
Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E.,
Gilbert J.G.R., Clamp M.E., Bethel G., Milne S., Ainscough R.,
Almeida J.P., Ambrose K.D., Andrews T.D., Ashwell R.I.S.,
Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Barker D.J.,
Barlow K.F., Bates K., Beare D.M., Beasley H., Beasley O., Bird C.P.,
Blakey S.E., Bray-Allen S., Brook J., Brown A.J., Brown J.Y.,
Burford D.C., Burrill W., Burton J., Carder C., Carter N.P.,
Chapman J.C., Clark S.Y., Clark G., Clee C.M., Clegg S., Cobley V.,
Collier R.E., Collins J.E., Colman L.K., Corby N.R., Coville G.J.,
Culley K.M., Dhami P., Davies J., Dunn M., Earthrowl M.E.,
Ellington A.E., Evans K.A., Faulkner L., Francis M.D., Frankish A.,
Frankland J., French L., Garner P., Garnett J., Ghori M.J.,
Gilby L.M., Gillson C.J., Glithero R.J., Grafham D.V., Grant M.,
Gribble S., Griffiths C., Griffiths M.N.D., Hall R., Halls K.S.,
Hammond S., Harley J.L., Hart E.A., Heath P.D., Heathcott R.,
Holmes S.J., Howden P.J., Howe K.L., Howell G.R., Huckle E.,
Humphray S.J., Humphries M.D., Hunt A.R., Johnson C.M., Joy A.A.,
Kay M., Keenan S.J., Kimberley A.M., King A., Laird G.K., Langford C.,
Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C.R., Lloyd D.M.,
Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M.,
Maslen G.L., Matthews L., McCann O.T., McLaren S.J., McLay K.,
McMurray A., Moore M.J.F., Mullikin J.C., Niblett D., Nickerson T.,
Novik K.L., Oliver K., Overton-Larty E.K., Parker A., Patel R.,
Pearce A.V., Peck A.I., Phillimore B.J.C.T., Phillips S., Plumb R.W.,
Porter K.M., Ramsey Y., Ranby S.A., Rice C.M., Ross M.T., Searle S.M.,
Sehra H.K., Sheridan E., Skuce C.D., Smith S., Smith M., Spraggon L.,
Squares S.L., Steward C.A., Sycamore N., Tamlyn-Hall G., Tester J.,
Theaker A.J., Thomas D.W., Thorpe A., Tracey A., Tromans A., Tubby B.,
Wall M., Wallis J.M., West A.P., White S.S., Whitehead S.L.,
Whittaker H., Wild A., Willey D.J., Wilmer T.E., Wood J.M., Wray P.W.,
Wyatt J.C., Young L., Younger R.M., Bentley D.R., Coulson A.,
Durbin R.M., Hubbard T., Sulston J.E., Dunham I., Rogers J., Beck S.;
"The DNA sequence and analysis of human chromosome 6.";
Nature 425:805-811(2003).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1), AND VARIANT
SER-61.
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
-!- INTERACTION:
Q08117:AES; NbExp=3; IntAct=EBI-2803328, EBI-717810;
Q9Y294:ASF1A; NbExp=5; IntAct=EBI-2803328, EBI-749553;
Q2TAC2:CCDC57; NbExp=3; IntAct=EBI-2803328, EBI-2808286;
P61978:HNRNPK; NbExp=6; IntAct=EBI-2803328, EBI-304185;
Q5VWX1:KHDRBS2; NbExp=5; IntAct=EBI-2803328, EBI-742808;
P25788:PSMA3; NbExp=3; IntAct=EBI-2803328, EBI-348380;
P38159:RBMX; NbExp=5; IntAct=EBI-2803328, EBI-743526;
P0DJD3:RBMY1A1; NbExp=3; IntAct=EBI-2803328, EBI-8638511;
Q15415:RBMY1J; NbExp=5; IntAct=EBI-2803328, EBI-8642021;
-!- ALTERNATIVE PRODUCTS:
Event=Alternative splicing; Named isoforms=2;
Name=1;
IsoId=P79522-1; Sequence=Displayed;
Name=2;
IsoId=P79522-2; Sequence=VSP_012818;
Note=No experimental confirmation available.;
-!- SEQUENCE CAUTION:
Sequence=AAB40147.1; Type=Erroneous initiation; Evidence={ECO:0000305};
-----------------------------------------------------------------------
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EMBL; U63336; AAB40147.1; ALT_INIT; mRNA.
EMBL; AL662825; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AL662800; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; BX000357; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; BX248518; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; BX927220; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; CR388372; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; CR847863; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; BC126457; AAI26458.1; -; mRNA.
CCDS; CCDS43440.1; -. [P79522-1]
CCDS; CCDS43441.1; -. [P79522-2]
RefSeq; NP_079539.2; NM_025263.3. [P79522-1]
UniGene; Hs.118354; -.
UniGene; Hs.651434; -.
ProteinModelPortal; P79522; -.
BioGrid; 123286; 30.
IntAct; P79522; 26.
STRING; 9606.ENSP00000365744; -.
iPTMnet; P79522; -.
PhosphoSitePlus; P79522; -.
BioMuta; PRR3; -.
DMDM; 59798092; -.
EPD; P79522; -.
PaxDb; P79522; -.
PeptideAtlas; P79522; -.
PRIDE; P79522; -.
DNASU; 80742; -.
Ensembl; ENST00000376557; ENSP00000365740; ENSG00000204576. [P79522-2]
Ensembl; ENST00000376560; ENSP00000365744; ENSG00000204576. [P79522-1]
Ensembl; ENST00000383592; ENSP00000373086; ENSG00000206491. [P79522-1]
Ensembl; ENST00000418065; ENSP00000404669; ENSG00000206491. [P79522-2]
Ensembl; ENST00000422140; ENSP00000411802; ENSG00000228186. [P79522-2]
Ensembl; ENST00000422639; ENSP00000401499; ENSG00000229202. [P79522-2]
Ensembl; ENST00000427729; ENSP00000402596; ENSG00000223766. [P79522-1]
Ensembl; ENST00000432371; ENSP00000396416; ENSG00000228186. [P79522-1]
Ensembl; ENST00000436805; ENSP00000406321; ENSG00000233564. [P79522-2]
Ensembl; ENST00000442290; ENSP00000401612; ENSG00000223887. [P79522-2]
Ensembl; ENST00000444972; ENSP00000393410; ENSG00000223766. [P79522-2]
Ensembl; ENST00000449754; ENSP00000398352; ENSG00000233564. [P79522-1]
Ensembl; ENST00000453232; ENSP00000415432; ENSG00000229202. [P79522-1]
Ensembl; ENST00000454399; ENSP00000392826; ENSG00000223887. [P79522-1]
GeneID; 80742; -.
KEGG; hsa:80742; -.
UCSC; uc003nqj.3; human. [P79522-1]
CTD; 80742; -.
DisGeNET; 80742; -.
EuPathDB; HostDB:ENSG00000204576.11; -.
GeneCards; PRR3; -.
HGNC; HGNC:21149; PRR3.
HPA; HPA064061; -.
neXtProt; NX_P79522; -.
OpenTargets; ENSG00000204576; -.
PharmGKB; PA134950097; -.
eggNOG; ENOG410J4IA; Eukaryota.
eggNOG; ENOG4111CMK; LUCA.
GeneTree; ENSGT00530000063820; -.
HOVERGEN; HBG053700; -.
InParanoid; P79522; -.
OMA; SAFHRGP; -.
OrthoDB; EOG091G07K1; -.
PhylomeDB; P79522; -.
TreeFam; TF337284; -.
GenomeRNAi; 80742; -.
PRO; PR:P79522; -.
Proteomes; UP000005640; Chromosome 6.
Bgee; ENSG00000204576; -.
CleanEx; HS_PRR3; -.
ExpressionAtlas; P79522; baseline and differential.
Genevisible; P79522; HS.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0003723; F:RNA binding; HDA:UniProtKB.
InterPro; IPR000571; Znf_CCCH.
InterPro; IPR036855; Znf_CCCH_sf.
Pfam; PF00642; zf-CCCH; 1.
SMART; SM00356; ZnF_C3H1; 1.
SUPFAM; SSF90229; SSF90229; 1.
PROSITE; PS50103; ZF_C3H1; 1.
1: Evidence at protein level;
Alternative splicing; Complete proteome; Metal-binding; Polymorphism;
Reference proteome; Repeat; Zinc; Zinc-finger.
CHAIN 1 188 Proline-rich protein 3.
/FTId=PRO_0000213889.
ZN_FING 155 183 C3H1-type. {ECO:0000255|PROSITE-
ProRule:PRU00723}.
COMPBIAS 12 118 Pro-rich.
VAR_SEQ 36 56 Missing (in isoform 2). {ECO:0000305}.
/FTId=VSP_012818.
VARIANT 61 61 G -> S (in dbSNP:rs3888778).
{ECO:0000269|PubMed:15489334}.
/FTId=VAR_052963.
SEQUENCE 188 AA; 20640 MW; 1EFDAFB4FFBBE153 CRC64;
MPKRKKQNHH QPPTQQQPPL PEREETGDEE DGSPIGPPSL LGPPPMANGK PGDPKSALHR
GPPGSRGPLI PPLLSLPPPP WGRGPIRRGL GPRSSPYGRG WWGVNAEPPF PGPGHGGPTR
GSFHKEQRNP RRLKSWSLIK NTCPPKDDPQ VMEDKSDRPV CRHFAKKGHC RYEDLCAFYH
PGVNGPPL


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