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Protein BRASSINAZOLE-RESISTANT 2 (Protein 107) (Protein BIN2 SUBSTRATE 1) (Protein BRI1-EMS-SUPPRESSOR 1)

 BZR2_ARATH              Reviewed;         335 AA.
Q9LN63; Q8LCX8; Q94JU1; Q9SEG5;
04-JAN-2005, integrated into UniProtKB/Swiss-Prot.
01-OCT-2000, sequence version 1.
10-OCT-2018, entry version 119.
RecName: Full=Protein BRASSINAZOLE-RESISTANT 2 {ECO:0000303|PubMed:11970900};
AltName: Full=Protein 107;
AltName: Full=Protein BIN2 SUBSTRATE 1 {ECO:0000303|PubMed:12427989};
AltName: Full=Protein BRI1-EMS-SUPPRESSOR 1 {ECO:0000303|PubMed:12007405};
Name=BZR2 {ECO:0000303|PubMed:11970900};
Synonyms=BES1 {ECO:0000303|PubMed:12007405},
BIS1 {ECO:0000303|PubMed:12427989};
OrderedLocusNames=At1g19350 {ECO:0000312|Araport:AT1G19350};
ORFNames=F18O14_4 {ECO:0000312|EMBL:AAF79422.1};
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=cv. Columbia;
Kwon H.-B.;
"Molecular cloning and characterization of a gibberellin-responsive
gene from Arabidopsis thaliana.";
Submitted (MAR-1999) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=11130712; DOI=10.1038/35048500;
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S.,
White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y.,
Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W.,
Chung M.K., Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K.,
Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y.,
Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L.,
Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E.,
Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B.,
Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P.,
Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A.,
Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I.,
Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D.,
Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M.,
Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M.,
Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.;
"Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana.";
Nature 408:816-820(2000).
[3]
GENOME REANNOTATION.
STRAIN=cv. Columbia;
PubMed=27862469; DOI=10.1111/tpj.13415;
Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
Town C.D.;
"Araport11: a complete reannotation of the Arabidopsis thaliana
reference genome.";
Plant J. 89:789-804(2017).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
PubMed=14593172; DOI=10.1126/science.1088305;
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J.,
Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F.,
Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.,
Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J.,
Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y.,
Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P.,
Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F.,
Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M.,
Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J.,
Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T.,
Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y.,
Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis
genome.";
Science 302:842-846(2003).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
Feldmann K.A.;
"Full-length cDNA from Arabidopsis thaliana.";
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
[6]
IDENTIFICATION.
PubMed=11970900; DOI=10.1016/S1534-5807(02)00153-3;
Wang Z.-Y., Nakano T., Gendron J., He J., Chen M., Vafeados D.,
Yang Y., Fujioka S., Yoshida S., Asami T., Chory J.;
"Nuclear-localized BZR1 mediates brassinosteroid-induced growth and
feedback suppression of brassinosteroid biosynthesis.";
Dev. Cell 2:505-513(2002).
[7]
FUNCTION, TISSUE SPECIFICITY, PHOSPHORYLATION, SUBCELLULAR LOCATION,
AND MUTANT BES1-D.
PubMed=12007405; DOI=10.1016/S0092-8674(02)00721-3;
Yin Y., Wang Z.Y., Mora-Garcia S., Li J., Yoshida S., Asami T.,
Chory J.;
"BES1 accumulates in the nucleus in response to brassinosteroids to
regulate gene expression and promote stem elongation.";
Cell 109:181-191(2002).
[8]
PHOSPHORYLATION, SUBCELLULAR LOCATION, MUTANT BES1-101, AND
INTERACTION WITH ASK7/BIN2.
PubMed=12427989; DOI=10.1104/pp.102.010918;
Zhao J., Peng P., Schmitz R.J., Decker A.D., Tax F.E., Li J.;
"Two putative BIN2 substrates are nuclear components of
brassinosteroid signaling.";
Plant Physiol. 130:1221-1229(2002).
[9]
FUNCTION, DNA-BINDING, AND INTERACTION WITH ASK7/BIN2; BIM1; BIM2 AND
BIM3.
PubMed=15680330; DOI=10.1016/j.cell.2004.11.044;
Yin Y., Vafeados D., Tao Y., Yoshida S., Asami T., Chory J.;
"A new class of transcription factors mediates brassinosteroid-
regulated gene expression in Arabidopsis.";
Cell 120:249-259(2005).
[10]
FUNCTION, AND INTERACTION WITH ELF6 AND REF6.
PubMed=18467490; DOI=10.1073/pnas.0802254105;
Yu X., Li L., Li L., Guo M., Chory J., Yin Y.;
"Modulation of brassinosteroid-regulated gene expression by Jumonji
domain-containing proteins ELF6 and REF6 in Arabidopsis.";
Proc. Natl. Acad. Sci. U.S.A. 105:7618-7623(2008).
[11]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-175, AND IDENTIFICATION
BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
STRAIN=cv. Columbia;
PubMed=19245862; DOI=10.1016/j.jprot.2009.02.004;
Jones A.M.E., MacLean D., Studholme D.J., Serna-Sanz A.,
Andreasson E., Rathjen J.P., Peck S.C.;
"Phosphoproteomic analysis of nuclei-enriched fractions from
Arabidopsis thaliana.";
J. Proteomics 72:439-451(2009).
[12]
FUNCTION, INTERACTION WITH MYB30, AND DOMAIN.
PubMed=19170933; DOI=10.1111/j.1365-313X.2008.03778.x;
Li L., Yu X., Thompson A., Guo M., Yoshida S., Asami T., Chory J.,
Yin Y.;
"Arabidopsis MYB30 is a direct target of BES1 and cooperates with BES1
to regulate brassinosteroid-induced gene expression.";
Plant J. 58:275-286(2009).
[13]
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
PubMed=19376835; DOI=10.1104/pp.109.138677;
Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A.,
Grossmann J., Gruissem W., Baginsky S.;
"Large-scale Arabidopsis phosphoproteome profiling reveals novel
chloroplast kinase substrates and phosphorylation networks.";
Plant Physiol. 150:889-903(2009).
[14]
FUNCTION, AND INTERACTION WITH IWS1.
PubMed=20139304; DOI=10.1073/pnas.0909198107;
Li L., Ye H., Guo H., Yin Y.;
"Arabidopsis IWS1 interacts with transcription factor BES1 and is
involved in plant steroid hormone brassinosteroid regulated gene
expression.";
Proc. Natl. Acad. Sci. U.S.A. 107:3918-3923(2010).
[15]
FUNCTION, DISRUPTION PHENOTYPE, INTERACTION WITH MYB56, AND
SUBCELLULAR LOCATION.
STRAIN=cv. Columbia;
PubMed=24981610; DOI=10.1016/j.devcel.2014.05.020;
Vilarrasa-Blasi J., Gonzalez-Garcia M.P., Frigola D., Fabregas N.,
Alexiou K.G., Lopez-Bigas N., Rivas S., Jauneau A., Lohmann J.U.,
Benfey P.N., Ibanes M., Cano-Delgado A.I.;
"Regulation of plant stem cell quiescence by a brassinosteroid
signaling module.";
Dev. Cell 30:36-47(2014).
[16]
FUNCTION, INTERACTION WITH ASHH2/SDG8, AND SUBCELLULAR LOCATION.
PubMed=24838002; DOI=10.1093/mp/ssu056;
Wang X., Chen J., Xie Z., Liu S., Nolan T., Ye H., Zhang M., Guo H.,
Schnable P.S., Li Z., Yin Y.;
"Histone lysine methyltransferase SDG8 is involved in brassinosteroid-
regulated gene expression in Arabidopsis thaliana.";
Mol. Plant 7:1303-1315(2014).
[17]
INTERACTION WITH WRKY46; WRKY54 AND WRKY70.
STRAIN=cv. Columbia;
PubMed=28576847; DOI=10.1105/tpc.17.00364;
Chen J., Nolan T.M., Ye H., Zhang M., Tong H., Xin P., Chu J., Chu C.,
Li Z., Yin Y.;
"Arabidopsis WRKY46, WRKY54, and WRKY70 transcription factors are
involved in brassinosteroid-regulated plant growth and drought
responses.";
Plant Cell 29:1425-1439(2017).
-!- FUNCTION: Positive regulator of brassinosteroid (BR) signaling.
Transcription factor that activates target gene expression by
binding specifically to the DNA sequence 5'-CANNTG-3'(E box)
through its N-terminal domain. Can bind individually to the
promoter as a homodimer or synergistically as a heterodimer with
BIM1, BIM2 or BIM3. The C-terminal domain is probably involved in
transcriptional activation (PubMed:12007405, PubMed:15680330,
PubMed:18467490, PubMed:19170933). Recruits the transcription
elongation factor IWS1 to control BR-regulated gene expression
(PubMed:20139304). Forms a trimeric complex with IWS1 and
ASHH2/SDG8 to regulate BR-regulated gene expression
(PubMed:24838002). Promotes quiescent center (QC) self-renewal by
cell divisions in the primary root. Binds to the E-boxes of the
BRAVO promoter to repress its expression (PubMed:24981610).
{ECO:0000269|PubMed:12007405, ECO:0000269|PubMed:15680330,
ECO:0000269|PubMed:18467490, ECO:0000269|PubMed:19170933,
ECO:0000269|PubMed:20139304, ECO:0000269|PubMed:24838002,
ECO:0000269|PubMed:24981610}.
-!- SUBUNIT: Interacts with ASK7/BIN2 through its C-terminal domain
and with the bHLH transcription factors BIM1, BIM2 and BIM3
through its C- and N-terminal domains. Interacts (via N-terminus)
with REF6 and ELF6 (PubMed:12427989, PubMed:15680330,
PubMed:18467490). Interacts with MYB30 (PubMed:19170933).
Interacts with IWS1 (PubMed:20139304). Interacts with ASHH2/SDG8
(PubMed:24838002). Binds to MYB56 when dephosphorylated in the
nucleus of quiescent center (QC) cells (PubMed:24981610). Binds to
WRKY46, WRKY54 and WRKY70 to cooperatively regulate the expression
of target genes (PubMed:28576847). {ECO:0000269|PubMed:12427989,
ECO:0000269|PubMed:15680330, ECO:0000269|PubMed:18467490,
ECO:0000269|PubMed:19170933, ECO:0000269|PubMed:20139304,
ECO:0000269|PubMed:24838002, ECO:0000269|PubMed:24981610,
ECO:0000269|PubMed:28576847}.
-!- INTERACTION:
Q9C9A5:ARABIDOPSIS MYB-LIKE 2; NbExp=5; IntAct=EBI-617078, EBI-1546577;
Q39011:ASK7; NbExp=2; IntAct=EBI-617078, EBI-1798250;
Q9LEZ3:BIM1; NbExp=2; IntAct=EBI-617078, EBI-617095;
Q6BDA0:ELF6; NbExp=3; IntAct=EBI-617078, EBI-1798417;
O49413:IWS2; NbExp=3; IntAct=EBI-617078, EBI-15834301;
Q9STM3:REF6; NbExp=2; IntAct=EBI-617078, EBI-1798387;
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:12007405,
ECO:0000269|PubMed:12427989, ECO:0000269|PubMed:24838002,
ECO:0000269|PubMed:24981610}. Cytoplasm
{ECO:0000269|PubMed:12007405}. Note=Brassinosteroid treatment
triggers nuclear accumulation. {ECO:0000269|PubMed:12007405}.
-!- ALTERNATIVE PRODUCTS:
Event=Alternative splicing; Named isoforms=1;
Comment=A number of isoforms are produced. According to EST
sequences.;
Name=1;
IsoId=Q9LN63-1; Sequence=Displayed;
-!- TISSUE SPECIFICITY: Ubiquitously expressed in cotyledons, leaves,
hypocotyls and roots. {ECO:0000269|PubMed:12007405}.
-!- DOMAIN: The central part (140-272) is important for interaction
with MYB30. {ECO:0000269|PubMed:19170933}.
-!- PTM: Phosphorylated by ASK7/BIN2. Phosphorylation increases
protein degradation and/or interferes with the nuclear
localization. {ECO:0000269|PubMed:12007405,
ECO:0000269|PubMed:12427989}.
-!- DISRUPTION PHENOTYPE: Reduced brassinosteroid (BR)-mediated
quiescent center (QC) cells division.
{ECO:0000269|PubMed:24981610}.
-!- SIMILARITY: Belongs to the BZR/LAT61 family. {ECO:0000305}.
-!- SEQUENCE CAUTION:
Sequence=AAK50077.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};
-----------------------------------------------------------------------
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-----------------------------------------------------------------------
EMBL; AF134217; AAF22161.1; -; mRNA.
EMBL; AC025808; AAF79422.1; -; Genomic_DNA.
EMBL; CP002684; AEE29834.1; -; Genomic_DNA.
EMBL; CP002684; AEE29836.1; -; Genomic_DNA.
EMBL; CP002684; AEE29837.1; -; Genomic_DNA.
EMBL; CP002684; AEE29838.1; -; Genomic_DNA.
EMBL; AY065041; AAL57677.1; -; mRNA.
EMBL; AF372937; AAK50077.1; ALT_INIT; mRNA.
EMBL; AY074829; AAL69527.1; -; mRNA.
EMBL; AY086340; AAM64408.1; -; mRNA.
EMBL; BK000396; DAA00023.1; -; mRNA.
PIR; G86326; G86326.
RefSeq; NP_001077562.1; NM_001084093.1. [Q9LN63-1]
RefSeq; NP_564081.1; NM_101792.4. [Q9LN63-1]
RefSeq; NP_973864.1; NM_202135.3. [Q9LN63-1]
RefSeq; NP_973865.1; NM_202136.1. [Q9LN63-1]
UniGene; At.24276; -.
ProteinModelPortal; Q9LN63; -.
BioGrid; 23757; 22.
DIP; DIP-34780N; -.
IntAct; Q9LN63; 21.
STRING; 3702.AT1G19350.3; -.
iPTMnet; Q9LN63; -.
PaxDb; Q9LN63; -.
PRIDE; Q9LN63; -.
EnsemblPlants; AT1G19350.1; AT1G19350.1; AT1G19350. [Q9LN63-1]
EnsemblPlants; AT1G19350.4; AT1G19350.4; AT1G19350. [Q9LN63-1]
EnsemblPlants; AT1G19350.5; AT1G19350.5; AT1G19350. [Q9LN63-1]
EnsemblPlants; AT1G19350.6; AT1G19350.6; AT1G19350. [Q9LN63-1]
GeneID; 838518; -.
Gramene; AT1G19350.1; AT1G19350.1; AT1G19350. [Q9LN63-1]
Gramene; AT1G19350.4; AT1G19350.4; AT1G19350. [Q9LN63-1]
Gramene; AT1G19350.5; AT1G19350.5; AT1G19350. [Q9LN63-1]
Gramene; AT1G19350.6; AT1G19350.6; AT1G19350. [Q9LN63-1]
KEGG; ath:AT1G19350; -.
Araport; AT1G19350; -.
eggNOG; ENOG410IGXV; Eukaryota.
eggNOG; ENOG410YC62; LUCA.
HOGENOM; HOG000238930; -.
InParanoid; Q9LN63; -.
KO; K14503; -.
PhylomeDB; Q9LN63; -.
PRO; PR:Q9LN63; -.
Proteomes; UP000006548; Chromosome 1.
ExpressionAtlas; Q9LN63; baseline and differential.
Genevisible; Q9LN63; AT.
GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO; GO:0005634; C:nucleus; IDA:UniProtKB.
GO; GO:0003677; F:DNA binding; IDA:UniProtKB.
GO; GO:0003700; F:DNA-binding transcription factor activity; IDA:UniProtKB.
GO; GO:0009742; P:brassinosteroid mediated signaling pathway; IMP:UniProtKB.
GO; GO:0071367; P:cellular response to brassinosteroid stimulus; IMP:UniProtKB.
GO; GO:1904961; P:quiescent center organization; IMP:UniProtKB.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
InterPro; IPR008540; BES1_N.
InterPro; IPR033264; BZR.
PANTHER; PTHR31506; PTHR31506; 1.
Pfam; PF05687; BES1_N; 1.
1: Evidence at protein level;
Alternative splicing; Brassinosteroid signaling pathway;
Complete proteome; Cytoplasm; DNA-binding; Nucleus; Phosphoprotein;
Reference proteome; Transcription; Transcription regulation.
CHAIN 1 335 Protein BRASSINAZOLE-RESISTANT 2.
/FTId=PRO_0000113272.
REGION 22 103 Required for DNA-binding. {ECO:0000250}.
REGION 231 251 PEST-like.
COMPBIAS 11 19 Poly-Ala.
COMPBIAS 21 40 Arg-rich.
COMPBIAS 100 139 Ser-rich.
MOD_RES 175 175 Phosphothreonine.
{ECO:0000244|PubMed:19245862}.
MUTAGEN 233 233 P->L: In bes1-101/bes1-D; insensitive to
brassinazole; increased stability of the
protein but no effect on its
phosphorylation.
CONFLICT 186 186 P -> S (in Ref. 5; AAM64408).
{ECO:0000305}.
CONFLICT 286 286 S -> F (in Ref. 1; AAF22161).
{ECO:0000305}.
SEQUENCE 335 AA; 36486 MW; 7B0AA929FED4748B CRC64;
MTSDGATSTS AAAAAAAMAT RRKPSWRERE NNRRRERRRR AVAAKIYTGL RAQGNYNLPK
HCDNNEVLKA LCSEAGWVVE EDGTTYRKGH KPLPGDMAGS SSRATPYSSH NQSPLSSTFD
SPILSYQVSP SSSSFPSPSR VGDPHNISTI FPFLRNGGIP SSLPPLRISN SAPVTPPVSS
PTSRNPKPLP TWESFTKQSM SMAAKQSMTS LNYPFYAVSA PASPTHHRQF HAPATIPECD
ESDSSTVDSG HWISFQKFAQ QQPFSASMVP TSPTFNLVKP APQQLSPNTA AIQEIGQSSE
FKFENSQVKP WEGERIHDVA MEDLELTLGN GKAHS


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