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Protein DOWNY MILDEW RESISTANCE 6 (AtDMR6) (EC 1.14.11.-) (2-oxoglutarate (2OG)-Fe(II) oxygenase-like protein DMR6) (Salicylate 3-hydroxylase DMR6) (S3H DMR6) (SA 3-hydroxylase DMR6) (Salicylic acid 3-hydroxylase DMR6) (EC 1.14.13.-)

 DMR6_ARATH              Reviewed;         341 AA.
Q9FLV0; Q8LEJ4;
17-FEB-2016, integrated into UniProtKB/Swiss-Prot.
01-MAR-2001, sequence version 1.
23-MAY-2018, entry version 118.
RecName: Full=Protein DOWNY MILDEW RESISTANCE 6 {ECO:0000303|PubMed:15986928};
Short=AtDMR6 {ECO:0000303|PubMed:15986928};
EC=1.14.11.- {ECO:0000255|PROSITE-ProRule:PRU00805};
AltName: Full=2-oxoglutarate (2OG)-Fe(II) oxygenase-like protein DMR6 {ECO:0000303|PubMed:18248595};
AltName: Full=Salicylate 3-hydroxylase DMR6 {ECO:0000305};
Short=S3H DMR6 {ECO:0000305};
Short=SA 3-hydroxylase DMR6 {ECO:0000305};
Short=Salicylic acid 3-hydroxylase DMR6 {ECO:0000305};
EC=1.14.13.- {ECO:0000250|UniProtKB:Q9ZSA8};
Name=DMR6 {ECO:0000303|PubMed:15986928};
OrderedLocusNames=At5g24530 {ECO:0000312|Araport:AT5G24530};
ORFNames=K18P6.6 {ECO:0000312|EMBL:AAK62420.1};
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=9628582; DOI=10.1093/dnares/5.1.41;
Sato S., Kaneko T., Kotani H., Nakamura Y., Asamizu E., Miyajima N.,
Tabata S.;
"Structural analysis of Arabidopsis thaliana chromosome 5. IV.
Sequence features of the regions of 1,456,315 bp covered by nineteen
physically assigned P1 and TAC clones.";
DNA Res. 5:41-54(1998).
[2]
GENOME REANNOTATION.
STRAIN=cv. Columbia;
PubMed=27862469; DOI=10.1111/tpj.13415;
Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
Town C.D.;
"Araport11: a complete reannotation of the Arabidopsis thaliana
reference genome.";
Plant J. 89:789-804(2017).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
PubMed=14593172; DOI=10.1126/science.1088305;
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J.,
Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F.,
Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.,
Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J.,
Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y.,
Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P.,
Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F.,
Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M.,
Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J.,
Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T.,
Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y.,
Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis
genome.";
Science 302:842-846(2003).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
Feldmann K.A.;
"Full-length cDNA from Arabidopsis thaliana.";
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
[5]
FUNCTION (MICROBIAL INFECTION), AND DISRUPTION PHENOTYPE.
STRAIN=cv. Landsberg erecta;
PubMed=15986928; DOI=10.1094/MPMI-18-0583;
Van Damme M., Andel A., Huibers R.P., Panstruga R., Weisbeek P.J.,
Van den Ackerveken G.;
"Identification of arabidopsis loci required for susceptibility to the
downy mildew pathogen Hyaloperonospora parasitica.";
Mol. Plant Microbe Interact. 18:583-592(2005).
[6]
FUNCTION, FUNCTION (MICROBIAL INFECTION), MUTAGENESIS OF HIS-212 AND
HIS-269, DISRUPTION PHENOTYPE, AND INDUCTION BY HYALOPERONOSPORA
ARABIDOPSIDIS AND BTH.
STRAIN=cv. Columbia, cv. Landsberg erecta, and cv. Wassilewskija-4;
PubMed=18248595; DOI=10.1111/j.1365-313X.2008.03427.x;
van Damme M., Huibers R.P., Elberse J., Van den Ackerveken G.;
"Arabidopsis DMR6 encodes a putative 2OG-Fe(II) oxygenase that is
defense-associated but required for susceptibility to downy mildew.";
Plant J. 54:785-793(2008).
[7]
FUNCTION, FUNCTION (MICROBIAL INFECTION), DISRUPTION PHENOTYPE,
MUTAGENESIS OF HIS-212 AND HIS-269, INDUCTION BY PATHOGENS, AND GENE
FAMILY.
STRAIN=cv. Columbia, and cv. Landsberg erecta;
PubMed=25376907; DOI=10.1111/tpj.12719;
Zeilmaker T., Ludwig N.R., Elberse J., Seidl M.F., Berke L.,
Van Doorn A., Schuurink R.C., Snel B., Van den Ackerveken G.;
"DOWNY MILDEW RESISTANT 6 and DMR6-LIKE OXYGENASE 1 are partially
redundant but distinct suppressors of immunity in Arabidopsis.";
Plant J. 81:210-222(2015).
-!- FUNCTION: Converts salicylic acid (SA) to 2,3-dihydroxybenzoic
acid (2,3-DHBA) (By similarity). Suppressor of immunity. Regulates
negatively defense associated genes expression (e.g. PR-1, PR-2,
and PR-5) (PubMed:18248595, PubMed:25376907). Negative regulator
of defense against Hyaloperonospora arabidopsidis
(PubMed:25376907). {ECO:0000250|UniProtKB:Q9ZSA8,
ECO:0000269|PubMed:18248595, ECO:0000269|PubMed:25376907}.
-!- FUNCTION: (Microbial infection) Required for susceptibility to the
downy mildew pathogen Hyaloperonospora arabidopsidis.
{ECO:0000269|PubMed:15986928, ECO:0000269|PubMed:18248595,
ECO:0000269|PubMed:25376907}.
-!- FUNCTION: (Microbial infection) Required for susceptibility to
Pseudomonas syringae pv. tomato DC3000.
{ECO:0000269|PubMed:25376907}.
-!- FUNCTION: (Microbial infection) Required for susceptibility to the
oomycete Phytophthora capsici. {ECO:0000269|PubMed:25376907}.
-!- CATALYTIC ACTIVITY: Salicylate + NADH + O(2) = 2,3-
dihydroxybenzoate + NAD(+) + H(2)O.
{ECO:0000250|UniProtKB:Q9ZSA8}.
-!- COFACTOR:
Name=Fe(2+); Xref=ChEBI:CHEBI:29033;
Evidence={ECO:0000255|PROSITE-ProRule:PRU00805};
Note=Binds 1 Fe(2+) ion per subunit. {ECO:0000255|PROSITE-
ProRule:PRU00805};
-!- INDUCTION: Locally induced during infections with both compatible
and incompatible Hyaloperonospora arabidopsidis isolates,
specifically in cells containing haustoria or directly surrounding
the intercellular hyphae (PubMed:18248595, PubMed:25376907).
Induced by the salicylic acid analog BTH. Accumulates in
constitutive defense mutants (e.g. sid2 and npr1 mutants)
(PubMed:18248595). Accumulates upon infection with the downy
mildew Hyaloperonospora arabidopsidis, the powdery mildew Erysiphe
orontii, and the bacterium Pseudomonas syringae as well as
salicylic acid (SA) treatment (PubMed:25376907).
{ECO:0000269|PubMed:18248595, ECO:0000269|PubMed:25376907}.
-!- DISRUPTION PHENOTYPE: In the double mutant eds1-2 dmr6-1 and in
dmr6-2, reduced susceptibility to the downy mildew pathogen
Hyaloperonospora arabidopsidis (PubMed:15986928, PubMed:18248595,
PubMed:25376907). Reduced hyphal growth due to immature haustoria,
often with aberrant shapes (PubMed:15986928, PubMed:18248595).
Reduced susceptibility to Pseudomonas syringae pv. tomato DC3000
and the oomycete Phytophthora capsici, associated with enhanced
defense gene expression and elevated salicylic acid levels
(PubMed:25376907). Normal susceptibility to P. syringae pv. tomato
and Golovinomyces orontii (PubMed:15986928). Enhanced expression
of a subset of defense-associated genes (PubMed:18248595).
{ECO:0000269|PubMed:15986928, ECO:0000269|PubMed:18248595,
ECO:0000269|PubMed:25376907}.
-!- SIMILARITY: Belongs to the iron/ascorbate-dependent oxidoreductase
family. {ECO:0000305}.
-----------------------------------------------------------------------
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Distributed under the Creative Commons Attribution (CC BY 4.0) License
-----------------------------------------------------------------------
EMBL; AB010068; BAB11205.1; -; Genomic_DNA.
EMBL; CP002688; AED93322.1; -; Genomic_DNA.
EMBL; AF386975; AAK62420.1; -; mRNA.
EMBL; AY081455; AAM10017.1; -; mRNA.
EMBL; AY085392; AAM62620.1; -; mRNA.
RefSeq; NP_197841.1; NM_122361.4.
UniGene; At.23761; -.
ProteinModelPortal; Q9FLV0; -.
SMR; Q9FLV0; -.
IntAct; Q9FLV0; 1.
STRING; 3702.AT5G24530.1; -.
iPTMnet; Q9FLV0; -.
PaxDb; Q9FLV0; -.
PRIDE; Q9FLV0; -.
EnsemblPlants; AT5G24530.1; AT5G24530.1; AT5G24530.
GeneID; 832524; -.
Gramene; AT5G24530.1; AT5G24530.1; AT5G24530.
KEGG; ath:AT5G24530; -.
Araport; AT5G24530; -.
TAIR; locus:2153924; AT5G24530.
eggNOG; KOG0143; Eukaryota.
eggNOG; COG3491; LUCA.
HOGENOM; HOG000276735; -.
OMA; DRPRMSI; -.
OrthoDB; EOG09360H2L; -.
PhylomeDB; Q9FLV0; -.
BioCyc; ARA:AT5G24530-MONOMER; -.
PRO; PR:Q9FLV0; -.
Proteomes; UP000006548; Chromosome 5.
ExpressionAtlas; Q9FLV0; baseline and differential.
GO; GO:0033759; F:flavone synthase activity; IDA:TAIR.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0034785; F:salicylate 5-hydroxylase activity; IDA:TAIR.
GO; GO:0042742; P:defense response to bacterium; IMP:UniProtKB.
GO; GO:0002229; P:defense response to oomycetes; IMP:UniProtKB.
GO; GO:0009813; P:flavonoid biosynthetic process; IDA:TAIR.
GO; GO:0010150; P:leaf senescence; IMP:TAIR.
GO; GO:0009617; P:response to bacterium; IGI:TAIR.
GO; GO:0009620; P:response to fungus; IGI:TAIR.
GO; GO:0002239; P:response to oomycetes; IMP:UniProtKB.
GO; GO:0009751; P:response to salicylic acid; IEP:UniProtKB.
GO; GO:0046244; P:salicylic acid catabolic process; ISS:UniProtKB.
Gene3D; 2.60.120.330; -; 1.
InterPro; IPR026992; DIOX_N.
InterPro; IPR027443; IPNS-like.
InterPro; IPR005123; Oxoglu/Fe-dep_dioxygenase.
Pfam; PF03171; 2OG-FeII_Oxy; 1.
Pfam; PF14226; DIOX_N; 1.
PROSITE; PS51471; FE2OG_OXY; 1.
1: Evidence at protein level;
Complete proteome; Dioxygenase; Iron; Metal-binding; NAD;
Oxidoreductase; Plant defense; Reference proteome.
CHAIN 1 341 Protein DOWNY MILDEW RESISTANCE 6.
/FTId=PRO_0000435627.
DOMAIN 188 288 Fe2OG dioxygenase. {ECO:0000255|PROSITE-
ProRule:PRU00805}.
METAL 212 212 Iron. {ECO:0000255|PROSITE-
ProRule:PRU00805}.
METAL 214 214 Iron. {ECO:0000255|PROSITE-
ProRule:PRU00805}.
METAL 269 269 Iron. {ECO:0000255|PROSITE-
ProRule:PRU00805}.
BINDING 279 279 2-oxoglutarate. {ECO:0000255|PROSITE-
ProRule:PRU00805}.
MUTAGEN 212 212 H->Q: Enhanced susceptibility to H.
arabidopsidis.
{ECO:0000269|PubMed:25376907}.
MUTAGEN 269 269 H->D: Enhanced susceptibility to H.
arabidopsidis.
{ECO:0000269|PubMed:25376907}.
CONFLICT 68 68 I -> K (in Ref. 4; AAM62620).
{ECO:0000305}.
CONFLICT 269 269 H -> R (in Ref. 4; AAM62620).
{ECO:0000305}.
CONFLICT 334 334 C -> F (in Ref. 4; AAM62620).
{ECO:0000305}.
SEQUENCE 341 AA; 39364 MW; E3A499D08AA6850E CRC64;
MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA
RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS DDPTKTTRLS TSFNVKKEEV
NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY
MKKVLGEQGQ HMAVNYYPPC PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA
VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N


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