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Protein GPR107 (Lung seven transmembrane receptor 1)

 GP107_HUMAN             Reviewed;         600 AA.
Q5VW38; A6NJ53; Q2TB81; Q5JPA3; Q5VW39; Q96T26; Q9H658; Q9HCE8;
05-JUL-2005, integrated into UniProtKB/Swiss-Prot.
07-DEC-2004, sequence version 1.
31-JAN-2018, entry version 115.
RecName: Full=Protein GPR107;
AltName: Full=Lung seven transmembrane receptor 1;
Flags: Precursor;
Name=GPR107; Synonyms=KIAA1624, LUSTR1;
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2).
Edgar A.J., Polak J.M.;
"Novel putative G protein-coupled receptors cloned from lung.";
J. Anat. 200:202-202(2002).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3).
TISSUE=Small intestine;
PubMed=14702039; DOI=10.1038/ng1285;
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A.,
Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M.,
Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y.,
Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M.,
Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K.,
Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S.,
Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J.,
Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y.,
Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N.,
Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S.,
Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y.,
Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T.,
Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y.,
Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S.,
Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T.,
Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M.,
Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T.,
Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K.,
Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R.,
Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.;
"Complete sequencing and characterization of 21,243 full-length human
cDNAs.";
Nat. Genet. 36:40-45(2004).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=15164053; DOI=10.1038/nature02465;
Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E.,
Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C.,
Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S.,
Babbage A.K., Babbage S., Bagguley C.L., Bailey J., Banerjee R.,
Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P.,
Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W.,
Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G.,
Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M.,
Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W.,
Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A.,
Frankland J.A., French L., Fricker D.G., Garner P., Garnett J.,
Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S.,
Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E.,
Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D.,
Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E.,
Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K.,
Kimberley A.M., King A., Knights A., Laird G.K., Langford C.,
Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M.,
Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S.,
McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J.,
Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R.,
Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M.,
Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M.,
Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A.,
Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P.,
Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W.,
Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R.M.,
Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S.,
Rogers J., Dunham I.;
"DNA sequence and analysis of human chromosome 9.";
Nature 429:369-374(2004).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L.,
Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R.,
Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V.,
Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R.,
Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H.,
Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G.,
Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W.,
Venter J.C.;
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[6]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 2-600 (ISOFORM 1).
TISSUE=Brain;
PubMed=10997877; DOI=10.1093/dnares/7.4.271;
Nagase T., Kikuno R., Nakayama M., Hirosawa M., Ohara O.;
"Prediction of the coding sequences of unidentified human genes.
XVIII. The complete sequences of 100 new cDNA clones from brain which
code for large proteins in vitro.";
DNA Res. 7:273-281(2000).
[7]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 44-600 (ISOFORM 2).
TISSUE=Lymph node;
PubMed=17974005; DOI=10.1186/1471-2164-8-399;
Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U.,
Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H.,
Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K.,
Ottenwaelder B., Poustka A., Wiemann S., Schupp I.;
"The full-ORF clone resource of the German cDNA consortium.";
BMC Genomics 8:399-399(2007).
[8]
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
PubMed=21269460; DOI=10.1186/1752-0509-5-17;
Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P.,
Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J.;
"Initial characterization of the human central proteome.";
BMC Syst. Biol. 5:17-17(2011).
[9]
FUNCTION, PROTEOLYTIC PROCESSING, SUBCELLULAR LOCATION, MUTAGENESIS OF
ARG-182, AND DISULFIDE BOND.
PubMed=25031321; DOI=10.1074/jbc.M114.589275;
Tafesse F.G., Guimaraes C.P., Maruyama T., Carette J.E., Lory S.,
Brummelkamp T.R., Ploegh H.L.;
"GPR107, a G-protein-coupled receptor essential for intoxication by
Pseudomonas aeruginosa exotoxin A, localizes to the Golgi and is
cleaved by furin.";
J. Biol. Chem. 289:24005-24018(2014).
-!- FUNCTION: Involved in Golgi-to-ER retrograde transport. Functions
as a host factor required for infection by Pseudomonas aeruginosa
exotoxin A and Campylobacter jejuni CDT toxins.
{ECO:0000269|PubMed:25031321}.
-!- SUBCELLULAR LOCATION: Golgi apparatus, trans-Golgi network
membrane {ECO:0000269|PubMed:25031321}; Multi-pass membrane
protein {ECO:0000255}.
-!- ALTERNATIVE PRODUCTS:
Event=Alternative splicing; Named isoforms=3;
Name=1;
IsoId=Q5VW38-1; Sequence=Displayed;
Name=2;
IsoId=Q5VW38-2; Sequence=VSP_014436;
Name=3;
IsoId=Q5VW38-3; Sequence=VSP_014434, VSP_014435;
Note=No experimental confirmation available.;
-!- PTM: Cleaved by a furin endopeptidase to yield two fragments of 17
and 35 kDa that remain associated via a disulfide bond.
{ECO:0000269|PubMed:25031321}.
-!- SIMILARITY: Belongs to the LU7TM family. {ECO:0000305}.
-----------------------------------------------------------------------
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EMBL; AF376725; AAK57695.1; -; mRNA.
EMBL; AK026244; BAB15408.1; -; mRNA.
EMBL; AL392105; CAH71210.1; -; Genomic_DNA.
EMBL; AL136141; CAH71210.1; JOINED; Genomic_DNA.
EMBL; AL360004; CAH71210.1; JOINED; Genomic_DNA.
EMBL; AL392105; CAH71211.1; -; Genomic_DNA.
EMBL; AL136141; CAH71211.1; JOINED; Genomic_DNA.
EMBL; AL360004; CAH71211.1; JOINED; Genomic_DNA.
EMBL; AL136141; CAI12152.1; -; Genomic_DNA.
EMBL; AL360004; CAI12152.1; JOINED; Genomic_DNA.
EMBL; AL392105; CAI12152.1; JOINED; Genomic_DNA.
EMBL; AL360004; CAI16952.1; -; Genomic_DNA.
EMBL; AL136141; CAI16952.1; JOINED; Genomic_DNA.
EMBL; AL392105; CAI16952.1; JOINED; Genomic_DNA.
EMBL; AL360004; CAI16953.1; -; Genomic_DNA.
EMBL; AL136141; CAI16953.1; JOINED; Genomic_DNA.
EMBL; AL392105; CAI16953.1; JOINED; Genomic_DNA.
EMBL; AL136141; CAI12153.1; -; Genomic_DNA.
EMBL; AL360004; CAI12153.1; JOINED; Genomic_DNA.
EMBL; AL392105; CAI12153.1; JOINED; Genomic_DNA.
EMBL; CH471090; EAW87924.1; -; Genomic_DNA.
EMBL; BC110518; AAI10519.1; -; mRNA.
EMBL; AB046844; BAB13450.1; -; mRNA.
EMBL; AL834359; CAI46205.1; ALT_SEQ; mRNA.
CCDS; CCDS35162.1; -. [Q5VW38-2]
CCDS; CCDS48041.1; -. [Q5VW38-1]
RefSeq; NP_001130029.1; NM_001136557.1. [Q5VW38-1]
RefSeq; NP_001130030.1; NM_001136558.1.
RefSeq; NP_066011.2; NM_020960.4. [Q5VW38-2]
UniGene; Hs.512461; -.
ProteinModelPortal; Q5VW38; -.
BioGrid; 121743; 10.
IntAct; Q5VW38; 2.
iPTMnet; Q5VW38; -.
PhosphoSitePlus; Q5VW38; -.
BioMuta; GPR107; -.
DMDM; 68565572; -.
EPD; Q5VW38; -.
MaxQB; Q5VW38; -.
PaxDb; Q5VW38; -.
PeptideAtlas; Q5VW38; -.
PRIDE; Q5VW38; -.
Ensembl; ENST00000347136; ENSP00000336988; ENSG00000148358. [Q5VW38-2]
Ensembl; ENST00000372406; ENSP00000361483; ENSG00000148358. [Q5VW38-1]
Ensembl; ENST00000610997; ENSP00000483750; ENSG00000148358. [Q5VW38-1]
GeneID; 57720; -.
KEGG; hsa:57720; -.
UCSC; uc004bzd.3; human. [Q5VW38-1]
CTD; 57720; -.
EuPathDB; HostDB:ENSG00000148358.19; -.
GeneCards; GPR107; -.
HGNC; HGNC:17830; GPR107.
HPA; HPA031704; -.
neXtProt; NX_Q5VW38; -.
OpenTargets; ENSG00000148358; -.
PharmGKB; PA28854; -.
eggNOG; KOG2569; Eukaryota.
eggNOG; ENOG410XQAQ; LUCA.
GeneTree; ENSGT00390000008649; -.
HOVERGEN; HBG056147; -.
InParanoid; Q5VW38; -.
OMA; FTRIIAF; -.
OrthoDB; EOG091G05OJ; -.
PhylomeDB; Q5VW38; -.
TreeFam; TF314804; -.
ChiTaRS; GPR107; human.
GeneWiki; GPR107; -.
GenomeRNAi; 57720; -.
PRO; PR:Q5VW38; -.
Proteomes; UP000005640; Chromosome 9.
Bgee; ENSG00000148358; -.
CleanEx; HS_GPR107; -.
ExpressionAtlas; Q5VW38; baseline and differential.
Genevisible; Q5VW38; HS.
GO; GO:0030136; C:clathrin-coated vesicle; IEA:Ensembl.
GO; GO:0005769; C:early endosome; IEA:Ensembl.
GO; GO:0005794; C:Golgi apparatus; IDA:HPA.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005654; C:nucleoplasm; IDA:HPA.
GO; GO:0032050; F:clathrin heavy chain binding; IEA:Ensembl.
GO; GO:0072583; P:clathrin-dependent endocytosis; IEA:Ensembl.
InterPro; IPR009637; GPR107-like.
PANTHER; PTHR21229; PTHR21229; 1.
Pfam; PF06814; Lung_7-TM_R; 2.
1: Evidence at protein level;
Alternative splicing; Complete proteome; Disulfide bond; Glycoprotein;
Golgi apparatus; Membrane; Polymorphism; Reference proteome; Signal;
Transmembrane; Transmembrane helix.
SIGNAL 1 39 {ECO:0000255}.
CHAIN 40 600 Protein GPR107.
/FTId=PRO_0000021340.
TOPO_DOM 40 263 Lumenal. {ECO:0000255}.
TRANSMEM 264 284 Helical; Name=1. {ECO:0000255}.
TOPO_DOM 285 293 Cytoplasmic. {ECO:0000255}.
TRANSMEM 294 314 Helical; Name=2. {ECO:0000255}.
TOPO_DOM 315 337 Lumenal. {ECO:0000255}.
TRANSMEM 338 358 Helical; Name=3. {ECO:0000255}.
TOPO_DOM 359 368 Cytoplasmic. {ECO:0000255}.
TRANSMEM 369 389 Helical; Name=4. {ECO:0000255}.
TOPO_DOM 390 402 Lumenal. {ECO:0000255}.
TRANSMEM 403 423 Helical; Name=5. {ECO:0000255}.
TOPO_DOM 424 498 Cytoplasmic. {ECO:0000255}.
TRANSMEM 499 519 Helical; Name=6. {ECO:0000255}.
TOPO_DOM 520 524 Lumenal. {ECO:0000255}.
TRANSMEM 525 544 Helical; Name=7. {ECO:0000255}.
TOPO_DOM 545 600 Cytoplasmic. {ECO:0000255}.
CARBOHYD 70 70 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 169 169 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 211 211 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
DISULFID 109 228 {ECO:0000269|PubMed:25031321}.
VAR_SEQ 298 300 MAA -> GFH (in isoform 3).
{ECO:0000303|PubMed:14702039}.
/FTId=VSP_014434.
VAR_SEQ 301 600 Missing (in isoform 3).
{ECO:0000303|PubMed:14702039}.
/FTId=VSP_014435.
VAR_SEQ 436 483 Missing (in isoform 2).
{ECO:0000303|PubMed:15489334,
ECO:0000303|PubMed:17974005,
ECO:0000303|Ref.1}.
/FTId=VSP_014436.
VARIANT 189 189 A -> P (in dbSNP:rs640343).
/FTId=VAR_030863.
MUTAGEN 182 182 R->A: Abolishes proteolytic cleavage.
{ECO:0000269|PubMed:25031321}.
CONFLICT 250 250 N -> D (in Ref. 2; BAB15408).
{ECO:0000305}.
CONFLICT 457 457 H -> R (in Ref. 6; BAB13450).
{ECO:0000305}.
CONFLICT 461 461 Q -> R (in Ref. 6; BAB13450).
{ECO:0000305}.
SEQUENCE 600 AA; 66990 MW; 679D414C0EB9F205 CRC64;
MAALAPVGSP ASRGPRLAAG LRLLPMLGLL QLLAEPGLGR VHHLALKDDV RHKVHLNTFG
FFKDGYMVVN VSSLSLNEPE DKDVTIGFSL DRTKNDGFSS YLDEDVNYCI LKKQSVSVTL
LILDISRSEV RVKSPPEAGT QLPKIIFSRD EKVLGQSQEP NVNPASAGNQ TQKTQDGGKS
KRSTVDSKAM GEKSFSVHNN GGAVSFQFFF NISTDDQEGL YSLYFHKCLG KELPSDKFTF
SLDIEITEKN PDSYLSAGEI PLPKLYISMA FFFFLSGTIW IHILRKRRND VFKIHWLMAA
LPFTKSLSLV FHAIDYHYIS SQGFPIEGWA VVYYITHLLK GALLFITIAL IGTGWAFIKH
ILSDKDKKIF MIVIPLQVLA NVAYIIIEST EEGTTEYGLW KDSLFLVDLL CCGAILFPVV
WSIRHLQEAS ATDGKGDSMG PLQQRANLRA GSRIESHHFA QADLELLASS CPPASVSQRA
GITAAINLAK LKLFRHYYVL IVCYIYFTRI IAFLLKLAVP FQWKWLYQLL DETATLVFFV
LTGYKFRPAS DNPYLQLSQE EEDLEMESVV TTSGVMESMK KVKKVTNGSV EPQGEWEGAV


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