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Protein Tat (Transactivating regulatory protein)

 M4P4E6_9HIV1            Unreviewed;       101 AA.
M4P4E6;
29-MAY-2013, integrated into UniProtKB/TrEMBL.
29-MAY-2013, sequence version 1.
18-JUL-2018, entry version 17.
RecName: Full=Protein Tat {ECO:0000256|RuleBase:RU003311, ECO:0000256|SAAS:SAAS00396010};
Name=tat {ECO:0000313|EMBL:AGG94594.1};
Human immunodeficiency virus 1.
Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
NCBI_TaxID=11676 {ECO:0000313|EMBL:AGG94594.1};
NCBI_TaxID=9606; Homo sapiens (Human).
[1] {ECO:0000313|EMBL:AGG94594.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C.703010131.w96.670dps.e15 {ECO:0000313|EMBL:AGG94526.1},
C.703010131.w96.670dps.e26 {ECO:0000313|EMBL:AGG94594.1},
C.703010131.w96.670dps.e27 {ECO:0000313|EMBL:AGG94602.1},
C.703010131.w96.670dps.e28 {ECO:0000313|EMBL:AGG94610.1}, and
C.703010131.w96.670dps.e30 {ECO:0000313|EMBL:AGG94625.1};
PubMed=23221345; DOI=10.1172/JCI65330;
CHAVI Core B;
Liu M.K., Hawkins N., Ritchie A.J., Ganusov V.V., Whale V.,
Brackenridge S., Li H., Pavlicek J.W., Cai F., Rose-Abrahams M.,
Treurnicht F., Hraber P., Riou C., Gray C., Ferrari G., Tanner R.,
Ping L.H., Anderson J.A., Swanstrom R., B C.C., Cohen M., Karim S.S.,
Haynes B., Borrow P., Perelson A.S., Shaw G.M., Hahn B.H.,
Williamson C., Korber B.T., Gao F., Self S., McMichael A.,
Goonetilleke N.;
"Vertical T cell immunodominance and epitope entropy determine HIV-1
escape.";
J. Clin. Invest. 123:380-393(2013).
-!- SUBCELLULAR LOCATION: Host nucleus, host nucleolus
{ECO:0000256|RuleBase:RU003311, ECO:0000256|SAAS:SAAS00581732}.
-!- SIMILARITY: Belongs to the lentiviruses Tat family.
{ECO:0000256|RuleBase:RU003311, ECO:0000256|SAAS:SAAS00581731}.
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EMBL; JX972575; AGG94526.1; -; Genomic_RNA.
EMBL; JX972584; AGG94594.1; -; Genomic_RNA.
EMBL; JX972585; AGG94602.1; -; Genomic_RNA.
EMBL; JX972586; AGG94610.1; -; Genomic_RNA.
EMBL; JX972588; AGG94625.1; -; Genomic_RNA.
GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
GO; GO:0044196; C:host cell nucleolus; IEA:UniProtKB-SubCell.
GO; GO:0042805; F:actinin binding; IEA:UniProtKB-UniRule.
GO; GO:0030332; F:cyclin binding; IEA:UniProtKB-UniRule.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-UniRule.
GO; GO:0019904; F:protein domain specific binding; IEA:UniProtKB-UniRule.
GO; GO:0001070; F:RNA binding transcription regulator activity; IEA:UniProtKB-UniRule.
GO; GO:1990970; F:trans-activation response element binding; IEA:UniProtKB-UniRule.
GO; GO:0039525; P:modulation by virus of host chromatin organization; IEA:UniProtKB-UniRule.
GO; GO:0039586; P:modulation by virus of host PP1 activity; IEA:UniProtKB-UniRule.
GO; GO:0010801; P:negative regulation of peptidyl-threonine phosphorylation; IEA:UniProtKB-UniRule.
GO; GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IEA:UniProtKB-UniRule.
GO; GO:0050434; P:positive regulation of viral transcription; IEA:UniProtKB-UniRule.
GO; GO:0039502; P:suppression by virus of host type I interferon-mediated signaling pathway; IEA:UniProtKB-UniRule.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
Gene3D; 4.10.20.10; -; 1.
HAMAP; MF_04079; HIV_TAT; 1.
InterPro; IPR001831; IV_Tat.
InterPro; IPR036963; Tat_dom_sf.
Pfam; PF00539; Tat; 1.
PRINTS; PR00055; HIVTATDOMAIN.
3: Inferred from homology;
Activator {ECO:0000256|RuleBase:RU003311,
ECO:0000256|SAAS:SAAS00111091};
Host nucleus {ECO:0000256|RuleBase:RU003311,
ECO:0000256|SAAS:SAAS00473431};
Host-virus interaction {ECO:0000256|SAAS:SAAS00111166};
RNA-binding {ECO:0000256|RuleBase:RU003311,
ECO:0000256|SAAS:SAAS00111359};
Transcription {ECO:0000256|RuleBase:RU003311,
ECO:0000256|SAAS:SAAS00111074};
Transcription regulation {ECO:0000256|RuleBase:RU003311,
ECO:0000256|SAAS:SAAS00111074}.
SEQUENCE 101 AA; 11378 MW; CB08079BA54FA3EB CRC64;
MEPIDPELDP WNHPGSQPKT ACNKCYCKGC SYHCLVCFQT KGLGISYGRK KRRQRRSAPP
SSEDHQNPIS KQPLSQTRGD STGSKESKKK VESKTETHPF D


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