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Protein Vpr (Viral protein R)

 A0A1L7E4E9_9HIV1        Unreviewed;        96 AA.
A0A1L7E4E9;
15-MAR-2017, integrated into UniProtKB/TrEMBL.
15-MAR-2017, sequence version 1.
27-SEP-2017, entry version 5.
RecName: Full=Protein Vpr {ECO:0000256|RuleBase:RU364021, ECO:0000256|SAAS:SAAS00144507};
AltName: Full=Viral protein R {ECO:0000256|RuleBase:RU364021};
Name=vpr {ECO:0000256|RuleBase:RU364021, ECO:0000313|EMBL:APU07409.1};
Human immunodeficiency virus 1.
Viruses; Retro-transcribing viruses; Retroviridae; Orthoretrovirinae;
Lentivirus; Primate lentivirus group.
NCBI_TaxID=11676 {ECO:0000313|EMBL:APU07409.1};
NCBI_TaxID=9606; Homo sapiens (Human).
[1] {ECO:0000313|EMBL:APU07409.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CH427.PL.011608.A2.1 {ECO:0000313|EMBL:APU04153.1},
CH427.PL.011608.A2.10 {ECO:0000313|EMBL:APU04162.1},
CH427.PL.011608.A2.2 {ECO:0000313|EMBL:APU04171.1},
CH427.PL.011608.A2.3 {ECO:0000313|EMBL:APU04180.1},
CH427.PL.011608.A2.4 {ECO:0000313|EMBL:APU04189.1},
CH427.PL.011608.A2.5 {ECO:0000313|EMBL:APU04198.1},
CH427.PL.011608.A2.6 {ECO:0000313|EMBL:APU04207.1},
CH427.PL.011608.A2.7 {ECO:0000313|EMBL:APU04216.1},
CH427.PL.011608.A2.8 {ECO:0000313|EMBL:APU04225.1},
CH427.PL.011608.A2.9 {ECO:0000313|EMBL:APU04234.1},
CH427.PL.011608.BE.1 {ECO:0000313|EMBL:APU04243.1},
CH427.PL.011608.UT.1 {ECO:0000313|EMBL:APU04252.1},
CH427.PL.011608.UT.10 {ECO:0000313|EMBL:APU04261.1},
CH427.PL.011608.UT.2 {ECO:0000313|EMBL:APU04270.1},
CH427.PL.011608.UT.3 {ECO:0000313|EMBL:APU04279.1},
CH427.PL.011608.UT.4 {ECO:0000313|EMBL:APU04288.1},
CH427.PL.011608.UT.5 {ECO:0000313|EMBL:APU04297.1},
CH427.PL.011608.UT.6 {ECO:0000313|EMBL:APU04305.1},
CH427.PL.011608.UT.8 {ECO:0000313|EMBL:APU04323.1},
CH427.PL.011608.UT.9 {ECO:0000313|EMBL:APU04332.1},
CH427_SGA.600.10 {ECO:0000313|EMBL:APU07268.1},
CH427_SGA.600.11 {ECO:0000313|EMBL:APU07276.1},
CH427_SGA.600.12 {ECO:0000313|EMBL:APU07284.1},
CH427_SGA.600.13 {ECO:0000313|EMBL:APU07291.1},
CH427_SGA.600.14 {ECO:0000313|EMBL:APU07299.1},
CH427_SGA.600.15 {ECO:0000313|EMBL:APU07307.1},
CH427_SGA.600.16 {ECO:0000313|EMBL:APU07315.1},
CH427_SGA.600.18 {ECO:0000313|EMBL:APU07323.1},
CH427_SGA.600.19 {ECO:0000313|EMBL:APU07331.1},
CH427_SGA.600.2 {ECO:0000313|EMBL:APU07339.1},
CH427_SGA.600.20 {ECO:0000313|EMBL:APU07347.1},
CH427_SGA.600.21 {ECO:0000313|EMBL:APU07355.1},
CH427_SGA.600.22 {ECO:0000313|EMBL:APU07362.1},
CH427_SGA.600.24 {ECO:0000313|EMBL:APU07370.1},
CH427_SGA.600.25 {ECO:0000313|EMBL:APU07378.1},
CH427_SGA.600.26 {ECO:0000313|EMBL:APU07386.1},
CH427_SGA.600.27 {ECO:0000313|EMBL:APU07394.1},
CH427_SGA.600.29 {ECO:0000313|EMBL:APU07402.1},
CH427_SGA.600.3 {ECO:0000313|EMBL:APU07409.1},
CH427_SGA.600.30 {ECO:0000313|EMBL:APU07417.1},
CH427_SGA.600.31 {ECO:0000313|EMBL:APU07425.1},
CH427_SGA.600.32 {ECO:0000313|EMBL:APU07433.1},
CH427_SGA.600.33 {ECO:0000313|EMBL:APU07441.1},
CH427_SGA.600.35 {ECO:0000313|EMBL:APU07449.1},
CH427_SGA.600.36 {ECO:0000313|EMBL:APU07457.1},
CH427_SGA.600.37 {ECO:0000313|EMBL:APU07465.1},
CH427_SGA.600.4 {ECO:0000313|EMBL:APU07480.1},
CH427_SGA.600.7 {ECO:0000313|EMBL:APU07496.1},
CH427_SGA.600.8 {ECO:0000313|EMBL:APU07504.1},
CH427_SGA.600.9 {ECO:0000313|EMBL:APU07512.1},
CH492.CV.020608.UT.11 {ECO:0000313|EMBL:APU04431.1},
CH492.CV.020608.UT.3 {ECO:0000313|EMBL:APU04503.1},
CH492.CV.020608.UT.9 {ECO:0000313|EMBL:APU04557.1},
CH492.PL.031108.A2.10 {ECO:0000313|EMBL:APU04575.1},
CH492.PL.031108.A2.5 {ECO:0000313|EMBL:APU04692.1},
CH492.PL.031108.A2.8 {ECO:0000313|EMBL:APU04719.1},
CH492.PL.031108.BE.4 {ECO:0000313|EMBL:APU04808.1},
CH492.PL.031108.BE.5 {ECO:0000313|EMBL:APU04817.1},
CH492.PL.031108.BE.6 {ECO:0000313|EMBL:APU04826.1},
CH492.PL.031108.BE.7 {ECO:0000313|EMBL:APU04835.1},
CH492.PL.031108.UT.3 {ECO:0000313|EMBL:APU04916.1},
CH492.PL.031108.UT.4 {ECO:0000313|EMBL:APU04925.1},
CH492.PL.031108.UT.9 {ECO:0000313|EMBL:APU04970.1},
CH492_SGA.1A12 {ECO:0000313|EMBL:APU07520.1},
CH492_SGA.1D12 {ECO:0000313|EMBL:APU07574.1},
CH492_SGA.1D3 {ECO:0000313|EMBL:APU07590.1},
CH492_SGA.1D4 {ECO:0000313|EMBL:APU07598.1},
CH492_SGA.1E9 {ECO:0000313|EMBL:APU07630.1},
CH492_SGA.2D2 {ECO:0000313|EMBL:APU07741.1},
CH492_SGA.2G12 {ECO:0000313|EMBL:APU07772.1}, and
CH492_SGA.2G6 {ECO:0000313|EMBL:APU07796.1};
PubMed=28069935;
Iyer S.S., Bibollet-Ruche F., Sherrill-Mix S., Learn G.H.,
Plenderleith L., Smith A.G., Barbian H.J., Russell R.M., Gondim M.V.,
Bahari C.Y., Shaw C.M., Li Y., Decker T., Haynes B.F., Shaw G.M.,
Sharp P.M., Borrow P., Hahn B.H.;
"Resistance to type 1 interferons is a major determinant of HIV-1
transmission fitness.";
Proc. Natl. Acad. Sci. U.S.A. 0:0-0(2017).
-!- FUNCTION: During virus entry, plays a role in the transport of the
viral pre-integration (PIC) complex to the host nucleus. This
function is crucial for viral infection of non-dividing
macrophages. May act directly at the nuclear pore complex, by
binding nucleoporins phenylalanine-glycine (FG)-repeat regions.
{ECO:0000256|RuleBase:RU364021}.
-!- FUNCTION: During virus replication, may deplete host UNG protein,
and incude G2-M cell cycle arrest. Acts by targeting specific host
proteins for degradation by the 26S proteasome, through
association with the cellular CUL4A-DDB1 E3 ligase complex by
direct interaction with host VPRPB/DCAF-1. Cell cycle arrest
reportedly occurs within hours of infection and is not blocked by
antiviral agents, suggesting that it is initiated by the VPR
carried into the virion. Additionally, VPR induces apoptosis in a
cell cycle dependent manner suggesting that these two effects are
mechanistically linked. Detected in the serum and cerebrospinal
fluid of AIDS patient, VPR may also induce cell death to bystander
cells. {ECO:0000256|RuleBase:RU364021}.
-!- SUBCELLULAR LOCATION: Host nucleus
{ECO:0000256|SAAS:SAAS00598690}.
-!- SUBCELLULAR LOCATION: Virion {ECO:0000256|RuleBase:RU364021}. Host
nucleus {ECO:0000256|RuleBase:RU364021}.
-----------------------------------------------------------------------
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EMBL; KY112197; APU04153.1; -; Genomic_RNA.
EMBL; KY112198; APU04162.1; -; Genomic_RNA.
EMBL; KY112199; APU04171.1; -; Genomic_RNA.
EMBL; KY112200; APU04180.1; -; Genomic_RNA.
EMBL; KY112201; APU04189.1; -; Genomic_RNA.
EMBL; KY112202; APU04198.1; -; Genomic_RNA.
EMBL; KY112203; APU04207.1; -; Genomic_RNA.
EMBL; KY112204; APU04216.1; -; Genomic_RNA.
EMBL; KY112205; APU04225.1; -; Genomic_RNA.
EMBL; KY112206; APU04234.1; -; Genomic_RNA.
EMBL; KY112207; APU04243.1; -; Genomic_RNA.
EMBL; KY112208; APU04252.1; -; Genomic_RNA.
EMBL; KY112209; APU04261.1; -; Genomic_RNA.
EMBL; KY112210; APU04270.1; -; Genomic_RNA.
EMBL; KY112211; APU04279.1; -; Genomic_RNA.
EMBL; KY112212; APU04288.1; -; Genomic_RNA.
EMBL; KY112213; APU04297.1; -; Genomic_RNA.
EMBL; KY112214; APU04305.1; -; Genomic_RNA.
EMBL; KY112216; APU04323.1; -; Genomic_RNA.
EMBL; KY112217; APU04332.1; -; Genomic_RNA.
EMBL; KY112261; APU04431.1; -; Genomic_RNA.
EMBL; KY112269; APU04503.1; -; Genomic_RNA.
EMBL; KY112275; APU04557.1; -; Genomic_RNA.
EMBL; KY112277; APU04575.1; -; Genomic_RNA.
EMBL; KY112290; APU04692.1; -; Genomic_RNA.
EMBL; KY112293; APU04719.1; -; Genomic_RNA.
EMBL; KY112303; APU04808.1; -; Genomic_RNA.
EMBL; KY112304; APU04817.1; -; Genomic_RNA.
EMBL; KY112305; APU04826.1; -; Genomic_RNA.
EMBL; KY112306; APU04835.1; -; Genomic_RNA.
EMBL; KY112315; APU04916.1; -; Genomic_RNA.
EMBL; KY112316; APU04925.1; -; Genomic_RNA.
EMBL; KY112321; APU04970.1; -; Genomic_RNA.
EMBL; KY112219; APU07268.1; -; Genomic_RNA.
EMBL; KY112220; APU07276.1; -; Genomic_RNA.
EMBL; KY112221; APU07284.1; -; Genomic_RNA.
EMBL; KY112222; APU07291.1; -; Genomic_RNA.
EMBL; KY112223; APU07299.1; -; Genomic_RNA.
EMBL; KY112224; APU07307.1; -; Genomic_RNA.
EMBL; KY112225; APU07315.1; -; Genomic_RNA.
EMBL; KY112226; APU07323.1; -; Genomic_RNA.
EMBL; KY112227; APU07331.1; -; Genomic_RNA.
EMBL; KY112228; APU07339.1; -; Genomic_RNA.
EMBL; KY112229; APU07347.1; -; Genomic_RNA.
EMBL; KY112230; APU07355.1; -; Genomic_RNA.
EMBL; KY112231; APU07362.1; -; Genomic_RNA.
EMBL; KY112232; APU07370.1; -; Genomic_RNA.
EMBL; KY112233; APU07378.1; -; Genomic_RNA.
EMBL; KY112234; APU07386.1; -; Genomic_RNA.
EMBL; KY112235; APU07394.1; -; Genomic_RNA.
EMBL; KY112236; APU07402.1; -; Genomic_RNA.
EMBL; KY112237; APU07409.1; -; Genomic_RNA.
EMBL; KY112238; APU07417.1; -; Genomic_RNA.
EMBL; KY112239; APU07425.1; -; Genomic_RNA.
EMBL; KY112240; APU07433.1; -; Genomic_RNA.
EMBL; KY112241; APU07441.1; -; Genomic_RNA.
EMBL; KY112242; APU07449.1; -; Genomic_RNA.
EMBL; KY112243; APU07457.1; -; Genomic_RNA.
EMBL; KY112244; APU07465.1; -; Genomic_RNA.
EMBL; KY112246; APU07480.1; -; Genomic_RNA.
EMBL; KY112248; APU07496.1; -; Genomic_RNA.
EMBL; KY112249; APU07504.1; -; Genomic_RNA.
EMBL; KY112250; APU07512.1; -; Genomic_RNA.
EMBL; KY112322; APU07520.1; -; Genomic_RNA.
EMBL; KY112329; APU07574.1; -; Genomic_RNA.
EMBL; KY112331; APU07590.1; -; Genomic_RNA.
EMBL; KY112332; APU07598.1; -; Genomic_RNA.
EMBL; KY112336; APU07630.1; -; Genomic_RNA.
EMBL; KY112350; APU07741.1; -; Genomic_RNA.
EMBL; KY112354; APU07772.1; -; Genomic_RNA.
EMBL; KY112357; APU07796.1; -; Genomic_RNA.
GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
GO; GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO; GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-KW.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
GO; GO:0046718; P:viral entry into host cell; IEA:UniProtKB-KW.
GO; GO:0075732; P:viral penetration into host nucleus; IEA:UniProtKB-KW.
InterPro; IPR000012; RetroV_VpR/X.
Pfam; PF00522; VPR; 1.
PRINTS; PR00444; HIVVPRVPX.
4: Predicted;
Activator {ECO:0000256|RuleBase:RU364021,
ECO:0000256|SAAS:SAAS00144503};
Cell cycle {ECO:0000256|RuleBase:RU364021,
ECO:0000256|SAAS:SAAS00144505};
Host nucleus {ECO:0000256|RuleBase:RU364021,
ECO:0000256|SAAS:SAAS00492936};
Host-virus interaction {ECO:0000256|RuleBase:RU364021,
ECO:0000256|SAAS:SAAS00144500};
Transcription {ECO:0000256|RuleBase:RU364021,
ECO:0000256|SAAS:SAAS00144488};
Transcription regulation {ECO:0000256|RuleBase:RU364021,
ECO:0000256|SAAS:SAAS00144488};
Viral penetration into host nucleus {ECO:0000256|RuleBase:RU364021,
ECO:0000256|SAAS:SAAS00144475};
Virion {ECO:0000256|RuleBase:RU364021, ECO:0000256|SAAS:SAAS00492961};
Virus entry into host cell {ECO:0000256|RuleBase:RU364021,
ECO:0000256|SAAS:SAAS00144475}.
SEQUENCE 96 AA; 11462 MW; 4127534C48BB0B56 CRC64;
MEQAPEDQGP QREPYNEWTL ELLEELKQEA VRHFPRPWLH NLGQHIYETY GDTWTGVEAI
IRILQQLLFI HFRIGCQHSR IGIIRQRRTR NGASRS


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