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Protein asunder (Cell cycle regulator Mat89Bb) (Integrator complex subunit 13) (Maternal transcript 89Bb) (Set apart in position or space protein)

 INT13_DROME             Reviewed;         689 AA.
Q9VEX5; Q27924; Q7JP08;
22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
01-MAY-2000, sequence version 1.
25-OCT-2017, entry version 112.
RecName: Full=Protein asunder {ECO:0000303|PubMed:19357193};
AltName: Full=Cell cycle regulator Mat89Bb {ECO:0000303|PubMed:15737938};
AltName: Full=Integrator complex subunit 13 {ECO:0000303|PubMed:23097424};
AltName: Full=Maternal transcript 89Bb {ECO:0000312|EMBL:AAF55290.1};
AltName: Full=Set apart in position or space protein {ECO:0000303|PubMed:19357193};
Name=Asun {ECO:0000312|FlyBase:FBgn0020407};
Synonyms=IntS13 {ECO:0000303|PubMed:23097424},
Mat89Bb {ECO:0000303|PubMed:15737938},
ovary2 {ECO:0000312|EMBL:AAA90971.1};
ORFNames=CG6814 {ECO:0000312|FlyBase:FBgn0020407};
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227;
[1] {ECO:0000305, ECO:0000312|EMBL:AAA90971.1}
NUCLEOTIDE SEQUENCE [MRNA], NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF
413-689, SUBCELLULAR LOCATION, TISSUE SPECIFICITY, AND DEVELOPMENTAL
STAGE.
PubMed=9799434; DOI=10.1007/s004270050211;
Stebbings L.A., Grimes B.R., Bownes M.;
"A testis-specifically expressed gene is embedded within a cluster of
maternally expressed genes at 89B in Drosophila melanogaster.";
Dev. Genes Evol. 208:523-530(1998).
[2] {ECO:0000312|EMBL:AAF55290.1}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley;
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G.,
Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A.,
Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X.,
Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[3] {ECO:0000305, ECO:0000312|EMBL:AAF55290.1}
GENOME REANNOTATION.
STRAIN=Berkeley;
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D.N.J., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[4] {ECO:0000312|EMBL:AAM49919.1}
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=Berkeley {ECO:0000312|EMBL:AAM49919.1};
TISSUE=Embryo {ECO:0000269|PubMed:12537569};
PubMed=12537569; DOI=10.1186/gb-2002-3-12-research0080;
Stapleton M., Carlson J.W., Brokstein P., Yu C., Champe M.,
George R.A., Guarin H., Kronmiller B., Pacleb J.M., Park S., Wan K.H.,
Rubin G.M., Celniker S.E.;
"A Drosophila full-length cDNA resource.";
Genome Biol. 3:RESEARCH0080.1-RESEARCH0080.8(2002).
[5] {ECO:0000305}
FUNCTION, PHOSPHORYLATION, AND DISRUPTION PHENOTYPE.
PubMed=15737938; DOI=10.1016/j.devcel.2004.12.008;
Lee L.A., Lee E., Anderson M.A., Vardy L., Tahinci E., Ali S.M.,
Kashevsky H., Benasutti M., Kirschner M.W., Orr-Weaver T.L.;
"Drosophila genome-scale screen for PAN GU kinase substrates
identifies Mat89Bb as a cell cycle regulator.";
Dev. Cell 8:435-442(2005).
[6]
FUNCTION, AND SUBCELLULAR LOCATION.
PubMed=19357193; DOI=10.1091/mbc.E08-12-1165;
Anderson M.A., Jodoin J.N., Lee E., Hales K.G., Hays T.S., Lee L.A.;
"Asunder is a critical regulator of dynein-dynactin localization
during Drosophila spermatogenesis.";
Mol. Biol. Cell 20:2709-2721(2009).
[7]
FUNCTION, SUBCELLULAR LOCATION, AND IDENTIFICATION IN THE INTEGRATOR
COMPLEX.
PubMed=23097424; DOI=10.1261/rna.035725.112;
Chen J., Ezzeddine N., Waltenspiel B., Albrecht T.R., Warren W.D.,
Marzluff W.F., Wagner E.J.;
"An RNAi screen identifies additional members of the Drosophila
Integrator complex and a requirement for cyclin C/Cdk8 in snRNA 3'-end
formation.";
RNA 18:2148-2156(2012).
[8]
FUNCTION, SUBCELLULAR LOCATION, DOMAIN, AND MUTAGENESIS OF
617-LYS--ARG-619.
PubMed=23904267; DOI=10.1091/mbc.E13-05-0254;
Jodoin J.N., Sitaram P., Albrecht T.R., May S.B., Shboul M., Lee E.,
Reversade B., Wagner E.J., Lee L.A.;
"Nuclear-localized Asunder regulates cytoplasmic dynein localization
via its role in the integrator complex.";
Mol. Biol. Cell 24:2954-2965(2013).
-!- FUNCTION: Component of the Integrator complex, a complex involved
in the transcription of small nuclear RNAs (snRNA) and their 3'-
box-dependent processing (PubMed:23097424). Involved in the 3'-end
processing of the U7 snRNA, and also the spliceosomal snRNAs U1
and U5 (PubMed:23097424). Plays a role as a regulator of
spermatogenesis (PubMed:19357193). Crucial regulator of the
mitotic cell cycle and development (PubMed:15737938,
PubMed:19357193). Required for the correct dynein-dynactin
perinuclear localization important for nucleus-centrosome coupling
that occur upon meiotic progression of primary spermatocytes
(PubMed:19357193,PubMed:23904267). Plays a role in sperm motility
and fertility (PubMed:19357193). May have a role in the
PNG/PLU/GNU pathway (PubMed:15737938).
{ECO:0000269|PubMed:15737938, ECO:0000269|PubMed:19357193,
ECO:0000269|PubMed:23097424, ECO:0000269|PubMed:23904267}.
-!- SUBUNIT: Belongs to the multiprotein complex Integrator, at least
composed of IntS1, IntS2, IntS3, IntS4, omd/IntS5, IntS6,
defl/IntS7, IntS8, IntS9, IntS10, IntS11, IntS12, asun/IntS13 and
IntS14. {ECO:0000305|PubMed:23097424}.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:19357193,
ECO:0000269|PubMed:23097424}. Cytoplasm
{ECO:0000269|PubMed:19357193, ECO:0000269|PubMed:23097424,
ECO:0000269|PubMed:9799434}. Cytoplasm, perinuclear region
{ECO:0000269|PubMed:19357193}. Note=Colocalizes with dynein-
dynactin on the nuclear surface at the meiotic G2/prophase
transition in primary spermatocytes (PubMed:19357193). Nuclear
location is required for recruitment of dynein motors to nuclear
envelope at G2/M (PubMed:23904267). {ECO:0000269|PubMed:19357193,
ECO:0000269|PubMed:23904267}.
-!- TISSUE SPECIFICITY: Expressed in nurse cells at stages 9-10 of
oogenesis and exported to the oocyte. Also expressed in the
follicle cells surrounding the oocyte.
{ECO:0000269|PubMed:9799434}.
-!- DEVELOPMENTAL STAGE: Expressed both maternally and zygotically.
Expressed in the nucleus during the G2 phase of primary
spermatocytes at stages S3-S4. Distributed between the nucleus and
the cytoplasm in G2 phase of primary spermatocytes at stage S5.
Localized in the cytoplasm in G2 phase of primary spermatocytes at
stage S6. Remains dispersed throughout the cell until the
completion of meiosis when it becomes restricted from nuclei of
onion-stage spermatides. {ECO:0000269|PubMed:9799434}.
-!- PTM: Phosphorylated. {ECO:0000269|PubMed:15737938}.
-!- DISRUPTION PHENOTYPE: Results in almost complete steril males.
Mature sperm formed in small amounts in testes are immotile or
weakly motile; seminal vesicles are largely empty. Primary
spermatocytes appeared normal (Cysts of 16 cells); however,
spermatids show irregularities in nuclear size and number.
Spermatocytes I exhibit failure of nucleus-centrosome coupling
that normally occur upon meiotic phase entry; those that progress
through meiotic divisions exhibit defects in spindle assembly and
chromosome segregation. When injected into Xenopus embryos, causes
developmental arrest with gastrulation defects and defective cell
cycles resulting in polyploid nuclei. RNAi injection into HeLa
cells or Drosophila syncytial embryos causes mitotic cell cycle,
giving rise to multinucleated polyploidy cells.
{ECO:0000269|PubMed:15737938}.
-!- SIMILARITY: Belongs to the asunder family. {ECO:0000305}.
-!- SEQUENCE CAUTION:
Sequence=AAA90969.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
Sequence=AAA90969.1; Type=Frameshift; Positions=569, 627; Evidence={ECO:0000305};
Sequence=AAA90971.1; Type=Erroneous termination; Positions=25; Note=Translated as Tyr.; Evidence={ECO:0000305};
Sequence=AAA90971.1; Type=Frameshift; Positions=569; Evidence={ECO:0000305};
-----------------------------------------------------------------------
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Distributed under the Creative Commons Attribution-NoDerivs License
-----------------------------------------------------------------------
EMBL; U47618; AAA90969.1; ALT_SEQ; Genomic_DNA.
EMBL; U47619; AAA90971.1; ALT_SEQ; mRNA.
EMBL; AE014297; AAF55290.1; -; Genomic_DNA.
EMBL; AY118550; AAM49919.1; -; mRNA.
RefSeq; NP_524379.2; NM_079655.4.
UniGene; Dm.2414; -.
BioGrid; 67019; 8.
IntAct; Q9VEX5; 1.
MINT; MINT-877730; -.
STRING; 7227.FBpp0082713; -.
PaxDb; Q9VEX5; -.
PRIDE; Q9VEX5; -.
EnsemblMetazoa; FBtr0083259; FBpp0082713; FBgn0020407.
GeneID; 41971; -.
KEGG; dme:Dmel_CG6814; -.
UCSC; CG6814-RA; d. melanogaster.
CTD; 334292; -.
FlyBase; FBgn0020407; asun.
eggNOG; KOG3711; Eukaryota.
eggNOG; ENOG410XS4B; LUCA.
GeneTree; ENSGT00390000002793; -.
InParanoid; Q9VEX5; -.
OMA; LKSGDTH; -.
OrthoDB; EOG091G03Z1; -.
PhylomeDB; Q9VEX5; -.
Reactome; R-DME-6807505; RNA polymerase II transcribes snRNA genes.
GenomeRNAi; 41971; -.
PRO; PR:Q9VEX5; -.
Proteomes; UP000000803; Chromosome 3R.
Bgee; FBgn0020407; -.
Genevisible; Q9VEX5; DM.
GO; GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO; GO:0032039; C:integrator complex; IDA:FlyBase.
GO; GO:0005634; C:nucleus; IDA:FlyBase.
GO; GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
GO; GO:0051642; P:centrosome localization; IMP:FlyBase.
GO; GO:0046843; P:dorsal appendage formation; IMP:FlyBase.
GO; GO:0030317; P:flagellated sperm motility; IMP:UniProtKB.
GO; GO:0051321; P:meiotic cell cycle; IEA:UniProtKB-KW.
GO; GO:0051663; P:oocyte nucleus localization involved in oocyte dorsal/ventral axis specification; IMP:FlyBase.
GO; GO:0060814; P:posterior mRNA localization involved in anterior/posterior axis specification; IMP:FlyBase.
GO; GO:0080154; P:regulation of fertilization; IMP:UniProtKB.
GO; GO:0007346; P:regulation of mitotic cell cycle; IMP:UniProtKB.
GO; GO:0034472; P:snRNA 3'-end processing; IDA:FlyBase.
GO; GO:0007283; P:spermatogenesis; IMP:FlyBase.
InterPro; IPR019355; Cell_cycle_regulator_Mat89Bb.
PANTHER; PTHR12955; PTHR12955; 2.
Pfam; PF10221; DUF2151; 1.
1: Evidence at protein level;
Cell cycle; Cell division; Coiled coil; Complete proteome; Cytoplasm;
Developmental protein; Differentiation; Meiosis; Mitosis; Nucleus;
Phosphoprotein; Reference proteome; Spermatogenesis.
CHAIN 1 689 Protein asunder.
/FTId=PRO_0000385342.
COILED 521 550 {ECO:0000255}.
MOTIF 613 619 Nuclear localization signal (NLS).
{ECO:0000269|PubMed:23904267}.
MUTAGEN 617 619 KRR->AAA: Loss of nuclear location.
Location is mainly cytoplasmic or
diffuse. {ECO:0000269|PubMed:23904267}.
CONFLICT 54 54 S -> T (in Ref. 1; AAA90971).
{ECO:0000305}.
CONFLICT 147 151 TDEQL -> PMSSW (in Ref. 1; AAA90971).
{ECO:0000305}.
CONFLICT 199 199 T -> S (in Ref. 1; AAA90971).
{ECO:0000305}.
CONFLICT 257 258 KL -> NV (in Ref. 1; AAA90971).
{ECO:0000305}.
CONFLICT 438 438 V -> M (in Ref. 1; AAA90969/AAA90971).
{ECO:0000305}.
CONFLICT 602 602 G -> V (in Ref. 1; AAA90969/AAA90971).
{ECO:0000305}.
SEQUENCE 689 AA; 75728 MW; E02C1F79DA88AE79 CRC64;
MFERNQKTIF VLDHTRYFSI ASEEYISMDF LKGKPSADGG ATGAAGNATG SGGSQFSKSL
WTCACESSIE YCRVVWDLFP GKKHVRFIVS DTAAHIVNTW RPSTQNMAHV MNAMLIVGVP
SRNVPTSSDY SVIHGLRAAI EALAEPTDEQ LAAMADFGTD ELPRIPNKGR VICITSARDN
TSMKSLEDIF NTVLVQQNTL AAPPSKKGLV IDHCHLVILN IVPLGVESLV TNRSLLKISP
LLDVEIHTVS APDISYKLTH LILNHYDLAS TTVTNIPMKE EQNANSSANY DVEILHSRRA
HSITCGPDFS LPTSIKQGAT YETVTLKWCT PRGCGSADLQ PCLGQFLVTP VDVTSRPSSC
LINFLLNGRS VLLEMPRKTG SKATSHMLSA RGGEIFVHSL CITRSCMDEA PSITDGPGGR
VSDYRTAELG QLIKMSRVVP LKVKDPSAPP LTRRLPRYFP LTTSSSILFH LQRHISWLPH
FLHLLVKEDM DKQDEVRCQQ HIHELYKSAS RGDVLPFTHT NGARLKLSKA KDQYRLLYRE
LEQLIQLNAT TMHHKNLLES LQSLRAAYGD APLKSEPGAS LLRTYTESPL SPERLEPISS
VGASGSSSSN SLLKASKRRM SSCGQRSLLD IISSAERSQS NKRLDFSGRL CTPLGQVAKL
YPDFGTKDKD TVTTGASITP NVKEESVRS


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