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Protein cramped

 CRM_DROME               Reviewed;         982 AA.
O76906; Q0KHW5; Q8MM10; Q8MM41; Q8MM71; Q8MX89; Q8MX90; Q8MX91;
Q8MX92; Q8MX93; Q8MX94; Q8MX95; Q9W4V7;
15-NOV-2002, integrated into UniProtKB/Swiss-Prot.
23-JAN-2007, sequence version 2.
25-OCT-2017, entry version 127.
RecName: Full=Protein cramped;
Name=crm; ORFNames=CG2714;
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227;
[1]
NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, SUBCELLULAR LOCATION, TISSUE
SPECIFICITY, AND DEVELOPMENTAL STAGE.
STRAIN=Oregon-R; TISSUE=Embryo;
PubMed=9310333;
Yamamoto Y., Girard F., Bello B., Affolter M., Gehring W.J.;
"The cramped gene of Drosophila is a member of the polycomb-group, and
interacts with mus209, the gene encoding proliferating cell nuclear
antigen.";
Development 124:3385-3394(1997).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=k1, k11, k2, k3, k5, k8, k9, pe1, pe10, pe12, pe2, pe29, pe33,
pe4, pe45, pe46, pe7, pe9, wi1, wi10, wi12, wi13, wi14, wi16, wi18,
wi19, wi2, wi27, wi28, wi4, wi5, wi7, and wi8;
PubMed=12351680; DOI=10.1073/pnas.202336899;
Harr B., Kauer M., Schloetterer C.;
"Hitchhiking mapping: a population-based fine-mapping strategy for
adaptive mutations in Drosophilamelanogaster.";
Proc. Natl. Acad. Sci. U.S.A. 99:12949-12954(2002).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley;
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G.,
Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A.,
Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X.,
Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[4]
GENOME REANNOTATION.
STRAIN=Berkeley;
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D.N.J., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Oregon-R;
PubMed=10731137; DOI=10.1126/science.287.5461.2220;
Benos P.V., Gatt M.K., Ashburner M., Murphy L., Harris D.,
Barrell B.G., Ferraz C., Vidal S., Brun C., Demailles J., Cadieu E.,
Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Borkova D.,
Minana B., Kafatos F.C., Louis C., Siden-Kiamos I., Bolshakov S.,
Papagiannakis G., Spanos L., Cox S., Madueno E., de Pablos B.,
Modolell J., Peter A., Schoettler P., Werner M., Mourkioti F.,
Beinert N., Dowe G., Schaefer U., Jaeckle H., Bucheton A.,
Callister D.M., Campbell L.A., Darlamitsou A., Henderson N.S.,
McMillan P.J., Salles C., Tait E.A., Valenti P., Saunders R.D.C.,
Glover D.M.;
"From sequence to chromosome: the tip of the X chromosome of D.
melanogaster.";
Science 287:2220-2222(2000).
[6]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=Berkeley; TISSUE=Embryo;
PubMed=12537569; DOI=10.1186/gb-2002-3-12-research0080;
Stapleton M., Carlson J.W., Brokstein P., Yu C., Champe M.,
George R.A., Guarin H., Kronmiller B., Pacleb J.M., Park S., Wan K.H.,
Rubin G.M., Celniker S.E.;
"A Drosophila full-length cDNA resource.";
Genome Biol. 3:RESEARCH0080.1-RESEARCH0080.8(2002).
[7]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-431 AND SER-437, AND
IDENTIFICATION BY MASS SPECTROMETRY.
TISSUE=Embryo;
PubMed=18327897; DOI=10.1021/pr700696a;
Zhai B., Villen J., Beausoleil S.A., Mintseris J., Gygi S.P.;
"Phosphoproteome analysis of Drosophila melanogaster embryos.";
J. Proteome Res. 7:1675-1682(2008).
-!- FUNCTION: Polycomb group (Pc-G) genes are needed to maintain
expression patterns of the homeotic selector genes of the
Antennapedia (Antp-C) and Bithorax (Bx-C) complexes, and hence for
the maintenance of segmental determination. Can act as a modifier
of position effect variegation (PEV).
{ECO:0000269|PubMed:9310333}.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:9310333}.
Note=During S-phase in early embryogenesis. Colocalizes with PCNA
in polytene nuclei during embryogenesis.
-!- TISSUE SPECIFICITY: Ubiquitously expressed throughout embryonic
development. High expression is detected in CNS and gonads.
{ECO:0000269|PubMed:9310333}.
-!- DEVELOPMENTAL STAGE: Expressed both maternally and zygotically.
{ECO:0000269|PubMed:9310333}.
-!- SIMILARITY: Belongs to the cramped family. {ECO:0000305}.
-!- SEQUENCE CAUTION:
Sequence=CAB55550.1; Type=Frameshift; Positions=676; Evidence={ECO:0000305};
-----------------------------------------------------------------------
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Distributed under the Creative Commons Attribution-NoDerivs License
-----------------------------------------------------------------------
EMBL; Y13674; CAB55550.1; ALT_FRAME; mRNA.
EMBL; AF365364; AAN04260.1; -; Genomic_DNA.
EMBL; AF365365; AAN04261.1; -; Genomic_DNA.
EMBL; AF365366; AAN04262.1; -; Genomic_DNA.
EMBL; AF365367; AAN04263.1; -; Genomic_DNA.
EMBL; AF365368; AAN04264.1; -; Genomic_DNA.
EMBL; AF365369; AAN04265.1; -; Genomic_DNA.
EMBL; AF365370; AAN04266.1; -; Genomic_DNA.
EMBL; AF365371; AAN04267.1; -; Genomic_DNA.
EMBL; AF365372; AAN04268.1; -; Genomic_DNA.
EMBL; AF365373; AAN04269.1; -; Genomic_DNA.
EMBL; AF365374; AAN04270.1; -; Genomic_DNA.
EMBL; AF365375; AAN04271.1; -; Genomic_DNA.
EMBL; AF365376; AAN04272.1; -; Genomic_DNA.
EMBL; AF365377; AAN04273.1; -; Genomic_DNA.
EMBL; AF365378; AAN04274.1; -; Genomic_DNA.
EMBL; AF365379; AAN04275.1; -; Genomic_DNA.
EMBL; AF365380; AAN04276.1; -; Genomic_DNA.
EMBL; AF365381; AAN04277.1; -; Genomic_DNA.
EMBL; AF365382; AAN04278.1; -; Genomic_DNA.
EMBL; AF365383; AAN04279.1; -; Genomic_DNA.
EMBL; AF365384; AAN04280.1; -; Genomic_DNA.
EMBL; AF365385; AAN04281.1; -; Genomic_DNA.
EMBL; AF365386; AAN04282.1; -; Genomic_DNA.
EMBL; AF365387; AAN04283.1; -; Genomic_DNA.
EMBL; AF365388; AAN04284.1; -; Genomic_DNA.
EMBL; AF365389; AAN04285.1; -; Genomic_DNA.
EMBL; AF365390; AAN04286.1; -; Genomic_DNA.
EMBL; AF365391; AAN04287.1; -; Genomic_DNA.
EMBL; AF365392; AAN04288.1; -; Genomic_DNA.
EMBL; AF365393; AAN04289.1; -; Genomic_DNA.
EMBL; AF365394; AAN04290.1; -; Genomic_DNA.
EMBL; AF365396; AAN04291.1; -; Genomic_DNA.
EMBL; AF365397; AAN04292.1; -; Genomic_DNA.
EMBL; AF365398; AAN04293.1; -; Genomic_DNA.
EMBL; AE014298; AAG22402.1; -; Genomic_DNA.
EMBL; AL021728; CAA16818.1; -; Genomic_DNA.
EMBL; AY051767; AAK93191.1; -; mRNA.
PIR; T13653; T13653.
RefSeq; NP_477105.2; NM_057757.4.
RefSeq; NP_726829.1; NM_166951.2.
UniGene; Dm.68; -.
ProteinModelPortal; O76906; -.
BioGrid; 57799; 3.
MINT; MINT-989253; -.
STRING; 7227.FBpp0070472; -.
iPTMnet; O76906; -.
PaxDb; O76906; -.
PRIDE; O76906; -.
GeneID; 31268; -.
KEGG; dme:Dmel_CG2714; -.
CTD; 109545; -.
FlyBase; FBgn0000376; crm.
eggNOG; ENOG410IFWT; Eukaryota.
eggNOG; ENOG4110SYD; LUCA.
InParanoid; O76906; -.
OrthoDB; EOG091G050A; -.
PhylomeDB; O76906; -.
GenomeRNAi; 31268; -.
PRO; PR:O76906; -.
Proteomes; UP000000803; Chromosome X.
Bgee; FBgn0000376; -.
Genevisible; O76906; DM.
GO; GO:0005634; C:nucleus; IDA:UniProtKB.
GO; GO:0003682; F:chromatin binding; IDA:FlyBase.
GO; GO:0003677; F:DNA binding; NAS:UniProtKB.
GO; GO:0006355; P:regulation of transcription, DNA-templated; NAS:UniProtKB.
GO; GO:0007379; P:segment specification; IMP:UniProtKB.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
CDD; cd00167; SANT; 1.
InterPro; IPR001005; SANT/Myb.
SMART; SM00717; SANT; 1.
1: Evidence at protein level;
Complete proteome; Developmental protein; DNA-binding; Nucleus;
Phosphoprotein; Polymorphism; Reference proteome; Transcription;
Transcription regulation.
CHAIN 1 982 Protein cramped.
/FTId=PRO_0000197138.
DOMAIN 109 173 SANT.
COMPBIAS 412 437 Glu/Pro/Ser/Thr-rich.
COMPBIAS 529 564 Ala-rich.
MOD_RES 431 431 Phosphoserine.
{ECO:0000269|PubMed:18327897}.
MOD_RES 437 437 Phosphoserine.
{ECO:0000269|PubMed:18327897}.
VARIANT 322 322 S -> N (in strain: k3 and k5).
VARIANT 402 402 M -> I (in strain: k5).
VARIANT 493 493 N -> T (in strain: Berkeley, k1, k8,
Oregon-R, pe7 and pe10).
VARIANT 527 527 S -> T (in strain: k2).
VARIANT 639 639 G -> A (in strain: Berkeley, k1, k2, k3,
k5, k8, k9 and k11).
VARIANT 747 747 M -> I (in strain: k5).
VARIANT 823 823 T -> I (in strain: Berkeley, k9, wi10 and
wi19).
VARIANT 830 830 T -> S (in strain: k1).
VARIANT 837 837 C -> S (in strain: Berkeley, k3, k8, k9,
wi10 and wi19).
VARIANT 842 842 M -> T (in strain: Berkeley, k1, k2, k3,
k5, k8, k9, k11, pe1, pe4, pe45, pe5,
wi4, wi7, wi10, wi13, wi18 and wi19).
VARIANT 845 845 S -> P (in strain: k8).
CONFLICT 645 645 A -> S (in Ref. 1; CAB55550, 2; AAN04260/
AAN04261/AAN04262/AAN04263/AAN04264/
AAN04265/AAN04266/AAN04267/AAN04268/
AAN04269/AAN04270/AAN04271/AAN04272/
AAN04273/AAN04274/AAN04275/AAN04276/
AAN04277/AAN04278/AAN04279/AAN04280/
AAN04281/AAN04282/AAN04283/AAN04284/
AAN04285/AAN04286/AAN04287/AAN04288/
AAN04289/AAN04290/AAN04291/AAN04292/
AAN04293 and 5; CAA16818). {ECO:0000305}.
CONFLICT 653 653 G -> S (in Ref. 1; CAB55550, 2; AAN04260/
AAN04261/AAN04262/AAN04263/AAN04264/
AAN04265/AAN04266/AAN04267/AAN04268/
AAN04269/AAN04270/AAN04271/AAN04272/
AAN04273/AAN04274/AAN04275/AAN04276/
AAN04277/AAN04278/AAN04279/AAN04280/
AAN04281/AAN04282/AAN04283/AAN04284/
AAN04285/AAN04286/AAN04287/AAN04288/
AAN04289/AAN04290/AAN04291/AAN04292/
AAN04293 and 5; CAA16818). {ECO:0000305}.
CONFLICT 965 965 F -> L (in Ref. 1; CAB55550).
{ECO:0000305}.
SEQUENCE 982 AA; 107416 MW; 37DC1820DB3ABBA3 CRC64;
MEELSKQPPP PPLTQPPPPS SSVSIEEPLP NGKGGGAVVV NSIAKLPEEE LLGSVTMHNC
PGTRASARVI QKMKQDQTRP MTPPPSEREP NKKEEKAAQK TPSQLKTGSG KTTWTNVERN
CFFDALNEFG KDFEAVANCI NAKLKRRNAN SDYSFKTKDQ VRQHYYQTHH KICKYVRFSE
ELKKPAQELY TLINYGEMRR KLQFLTEKHF MKLKQLVYQG QITVRCKGKN IRIKTPSCKA
LRRLNQLDDS LEDIRLPSKV EVLVTPANME AFGRVQSLAQ NPRGRIIVPL HKKLISFIKT
FEYKWRSANQ RLHEEKSAYF SSSLPSAASN NNNNNNETEP LQPSVASLDP SMCFQPRPGV
AIHRPLLSIT AYLSSISICL TAYEERMGFK VRSETLGNLA GMSVAANKRL RTESGSEKRS
PETKKPKSSA SPPLEKSLDD GPLEGNLMKM ENSSGDELGE EIHEFLGDIL EAMQHPQAAT
IPALSATTGD TTNVAVALET SHDPVQQAYP ANADLSNAMA TSVLQTSCAA APAPSTPVTG
SLAAPSVARS KRKEAKEAAA AAQARNFKPL LSDDILKRIR KGWTQANAAD ITIGDLYVVF
GQDSKLELEY YWCEVDSSTA MASSILTINT VTPSSSSVGT QTGSAASNAN QTGASSNCYV
SASSNSSTSS TSLPYNPNDC DSVERVRAVT TSSVSNKLKH LLLVANLSER VRKRQCNCGH
TCDRKRDLMT KAQQLAEATA TGGVGGMVEG NFRTPMLPVR RPISNIDPVR QLSALTRQKI
SRQVLVQRRL LPPTSAGDRP YDLLSVRQLH SGLFEPIDRV DGTSSAGIST SGSKPDCSMN
AMTASQDQEP GDQGALEFLN DEATQVSARD MPNLDICVAT NRTDVSSSLN EAAQDGSTTQ
SFFQGSMSPM HLLRDSTSNA RWLEDNINDF SLTSLLGHLD EIDATRDILD PSSSMSVISE
SSVDFRHKFQ EIAALLQQQE KD


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