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Protein pelota homolog (EC 3.1.-.-)

 B7R5D8_9EURY            Unreviewed;       357 AA.
B7R5D8;
10-FEB-2009, integrated into UniProtKB/TrEMBL.
10-FEB-2009, sequence version 1.
28-MAR-2018, entry version 57.
RecName: Full=Protein pelota homolog {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS01014537};
EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS01018524};
Name=pelA {ECO:0000256|HAMAP-Rule:MF_01853};
ORFNames=TAM4_1860 {ECO:0000313|EMBL:EEB73003.1};
Thermococcus sp. AM4.
Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
Thermococcus.
NCBI_TaxID=246969 {ECO:0000313|EMBL:EEB73003.1, ECO:0000313|Proteomes:UP000009277};
[1] {ECO:0000313|EMBL:EEB73003.1, ECO:0000313|Proteomes:UP000009277}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=AM4 {ECO:0000313|EMBL:EEB73003.1};
PubMed=22123768; DOI=10.1128/JB.06259-11;
Oger P., Sokolova T.G., Kozhevnikova D.A., Chernyh N.A.,
Bartlett D.H., Bonch-Osmolovskaya E.A., Lebedinsky A.V.;
"Complete Genome Sequence of the Hyperthermophilic Archaeon
Thermococcus sp. Strain AM4, Capable of Organotrophic Growth and
Growth at the Expense of Hydrogenogenic or Sulfidogenic Oxidation of
Carbon Monoxide.";
J. Bacteriol. 193:7019-7020(2011).
-!- FUNCTION: May function in recognizing stalled ribosomes, interact
with stem-loop structures in stalled mRNA molecules, and effect
endonucleolytic cleavage of the mRNA. May play a role in the
release non-functional ribosomes and degradation of damaged mRNAs.
Has endoribonuclease activity. {ECO:0000256|HAMAP-Rule:MF_01853,
ECO:0000256|SAAS:SAAS01014530}.
-!- COFACTOR:
Name=a divalent metal cation; Xref=ChEBI:CHEBI:60240;
Evidence={ECO:0000256|HAMAP-Rule:MF_01853,
ECO:0000256|SAAS:SAAS01018525};
-!- SUBUNIT: Monomer. {ECO:0000256|HAMAP-Rule:MF_01853,
ECO:0000256|SAAS:SAAS01014529}.
-!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_01853,
ECO:0000256|SAAS:SAAS01018526}.
-!- DOMAIN: The N-terminal domain has the RNA-binding Sm fold. It
harbors the endoribonuclease activity. {ECO:0000256|HAMAP-
Rule:MF_01853}.
-!- SIMILARITY: Belongs to the eukaryotic release factor 1 family.
Pelota subfamily. {ECO:0000256|HAMAP-Rule:MF_01853,
ECO:0000256|SAAS:SAAS01018523}.
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EMBL; CP002952; EEB73003.1; -; Genomic_DNA.
RefSeq; WP_014121576.1; NC_016051.1.
STRING; 246969.TAM4_1860; -.
EnsemblBacteria; EEB73003; EEB73003; TAM4_1860.
GeneID; 7419225; -.
KEGG; tha:TAM4_1860; -.
eggNOG; arCOG01741; Archaea.
eggNOG; COG1537; LUCA.
KO; K06965; -.
OrthoDB; POG093Z0692; -.
BioCyc; TSP246969:G1GNJ-407-MONOMER; -.
Proteomes; UP000009277; Chromosome.
GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-UniRule.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-UniRule.
GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
GO; GO:0070966; P:nuclear-transcribed mRNA catabolic process, no-go decay; IEA:InterPro.
GO; GO:0070481; P:nuclear-transcribed mRNA catabolic process, non-stop decay; IEA:InterPro.
GO; GO:0071025; P:RNA surveillance; IEA:InterPro.
Gene3D; 2.30.30.870; -; 1.
Gene3D; 3.30.1330.30; -; 1.
HAMAP; MF_01853; PelO; 1.
InterPro; IPR005140; eRF1_1_Pelota.
InterPro; IPR005141; eRF1_2.
InterPro; IPR005142; eRF1_3.
InterPro; IPR029064; L30e-like.
InterPro; IPR038069; Pelota/DOM34_N.
InterPro; IPR023521; Pelota_arc.
InterPro; IPR004405; Transl-rel_pelota.
PANTHER; PTHR10853; PTHR10853; 1.
Pfam; PF03463; eRF1_1; 1.
Pfam; PF03464; eRF1_2; 1.
Pfam; PF03465; eRF1_3; 1.
SMART; SM01194; eRF1_1; 1.
SUPFAM; SSF159065; SSF159065; 1.
SUPFAM; SSF55315; SSF55315; 1.
TIGRFAMs; TIGR00111; pelota; 1.
3: Inferred from homology;
Cell cycle {ECO:0000313|EMBL:EEB73003.1};
Cell division {ECO:0000313|EMBL:EEB73003.1};
Complete proteome {ECO:0000313|Proteomes:UP000009277};
Cytoplasm {ECO:0000256|HAMAP-Rule:MF_01853,
ECO:0000256|SAAS:SAAS01018532};
Endonuclease {ECO:0000256|HAMAP-Rule:MF_01853,
ECO:0000256|SAAS:SAAS01018533};
Hydrolase {ECO:0000256|HAMAP-Rule:MF_01853,
ECO:0000256|SAAS:SAAS01018533};
Metal-binding {ECO:0000256|HAMAP-Rule:MF_01853,
ECO:0000256|SAAS:SAAS01018529};
Nuclease {ECO:0000256|HAMAP-Rule:MF_01853,
ECO:0000256|SAAS:SAAS01018533}.
DOMAIN 1 129 eRF1_1. {ECO:0000259|SMART:SM01194}.
SEQUENCE 357 AA; 40680 MW; CB58F1F066A5FFFF CRC64;
MQILEEKPKE GIVKVKAETL DDLWHLYHVI DPGDIVYAKT LRKQAQRADA LRAEKVEVIP
VYLGVKAEKI NFHKFANQVR VTGPIVYASR EDVPLGKYHT ITIEEGTVVT IQKPRWKEHH
IERLKEAIEA SKRAKVMIVV IDEGEADIAL VREYGVEMVA SIRRNLGGKR YNTDRESEEK
RFFHDLAKTM AELMEREKIE KAIVAGPGFV KEDFHKFLRE NYPELAKKVV IEDTSVTGRT
GIYEVIKRGT VDRVYHENRV AKEVQLVEKV LENIARNNGL ATYGLREVEE AVNYGAVETL
LVLDELLKGD LREKVEELMD AVRYSRGEVV IVSSEHEGGE KLKALGGLAA LLRFRVK


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