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Protein transport protein Sec24A (Fragment)

 H0Y9J6_HUMAN            Unreviewed;       150 AA.
H0Y9J6;
22-FEB-2012, integrated into UniProtKB/TrEMBL.
22-FEB-2012, sequence version 1.
25-OCT-2017, entry version 33.
SubName: Full=Protein transport protein Sec24A {ECO:0000313|Ensembl:ENSP00000424273};
Flags: Fragment;
Name=SEC24A {ECO:0000313|Ensembl:ENSP00000424273};
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606 {ECO:0000313|Ensembl:ENSP00000424273, ECO:0000313|Proteomes:UP000005640};
[1] {ECO:0000313|Proteomes:UP000005640}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=15372022; DOI=10.1038/nature02919;
Schmutz J., Martin J., Terry A., Couronne O., Grimwood J., Lowry S.,
Gordon L.A., Scott D., Xie G., Huang W., Hellsten U., Tran-Gyamfi M.,
She X., Prabhakar S., Aerts A., Altherr M., Bajorek E., Black S.,
Branscomb E., Caoile C., Challacombe J.F., Chan Y.M., Denys M.,
Detter J.C., Escobar J., Flowers D., Fotopulos D., Glavina T.,
Gomez M., Gonzales E., Goodstein D., Grigoriev I., Groza M.,
Hammon N., Hawkins T., Haydu L., Israni S., Jett J., Kadner K.,
Kimball H., Kobayashi A., Lopez F., Lou Y., Martinez D., Medina C.,
Morgan J., Nandkeshwar R., Noonan J.P., Pitluck S., Pollard M.,
Predki P., Priest J., Ramirez L., Retterer J., Rodriguez A.,
Rogers S., Salamov A., Salazar A., Thayer N., Tice H., Tsai M.,
Ustaszewska A., Vo N., Wheeler J., Wu K., Yang J., Dickson M.,
Cheng J.-F., Eichler E.E., Olsen A., Pennacchio L.A., Rokhsar D.S.,
Richardson P., Lucas S.M., Myers R.M., Rubin E.M.;
"The DNA sequence and comparative analysis of human chromosome 5.";
Nature 431:268-274(2004).
[2] {ECO:0000313|Ensembl:ENSP00000424273}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=15815621; DOI=10.1038/nature03466;
Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H.,
Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M.,
Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E.,
Kremitzki C., Oddy L., Du H., Sun H., Bradshaw-Cordum H., Ali J.,
Carter J., Cordes M., Harris A., Isak A., van Brunt A., Nguyen C.,
Du F., Courtney L., Kalicki J., Ozersky P., Abbott S., Armstrong J.,
Belter E.A., Caruso L., Cedroni M., Cotton M., Davidson T., Desai A.,
Elliott G., Erb T., Fronick C., Gaige T., Haakenson W., Haglund K.,
Holmes A., Harkins R., Kim K., Kruchowski S.S., Strong C.M.,
Grewal N., Goyea E., Hou S., Levy A., Martinka S., Mead K.,
McLellan M.D., Meyer R., Randall-Maher J., Tomlinson C.,
Dauphin-Kohlberg S., Kozlowicz-Reilly A., Shah N.,
Swearengen-Shahid S., Snider J., Strong J.T., Thompson J., Yoakum M.,
Leonard S., Pearman C., Trani L., Radionenko M., Waligorski J.E.,
Wang C., Rock S.M., Tin-Wollam A.-M., Maupin R., Latreille P.,
Wendl M.C., Yang S.-P., Pohl C., Wallis J.W., Spieth J., Bieri T.A.,
Berkowicz N., Nelson J.O., Osborne J., Ding L., Meyer R., Sabo A.,
Shotland Y., Sinha P., Wohldmann P.E., Cook L.L., Hickenbotham M.T.,
Eldred J., Williams D., Jones T.A., She X., Ciccarelli F.D.,
Izaurralde E., Taylor J., Schmutz J., Myers R.M., Cox D.R., Huang X.,
McPherson J.D., Mardis E.R., Clifton S.W., Warren W.C.,
Chinwalla A.T., Eddy S.R., Marra M.A., Ovcharenko I., Furey T.S.,
Miller W., Eichler E.E., Bork P., Suyama M., Torrents D.,
Waterston R.H., Wilson R.K.;
"Generation and annotation of the DNA sequences of human chromosomes 2
and 4.";
Nature 434:724-731(2005).
[3] {ECO:0000213|PubMed:21269460}
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
PubMed=21269460; DOI=10.1186/1752-0509-5-17;
Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P.,
Burckstummer T., Bennett K.L., Superti-Furga G., Colinge J.;
"Initial characterization of the human central proteome.";
BMC Syst. Biol. 5:17-17(2011).
[4] {ECO:0000313|Ensembl:ENSP00000424273}
IDENTIFICATION.
Ensembl;
Submitted (JAN-2012) to UniProtKB.
-!- CAUTION: The sequence shown here is derived from an Ensembl
automatic analysis pipeline and should be considered as
preliminary data. {ECO:0000313|Ensembl:ENSP00000424273}.
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EMBL; AC010301; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AC106763; -; NOT_ANNOTATED_CDS; Genomic_DNA.
ProteinModelPortal; H0Y9J6; -.
MaxQB; H0Y9J6; -.
PeptideAtlas; H0Y9J6; -.
PRIDE; H0Y9J6; -.
Ensembl; ENST00000513123; ENSP00000424273; ENSG00000113615.
UCSC; uc063hci.1; human.
EuPathDB; HostDB:ENSG00000113615.12; -.
HGNC; HGNC:10703; SEC24A.
OpenTargets; ENSG00000113615; -.
GeneTree; ENSGT00590000082962; -.
ChiTaRS; SEC24A; human.
Proteomes; UP000005640; Chromosome 5.
Bgee; ENSG00000113615; -.
ExpressionAtlas; H0Y9J6; baseline and differential.
GO; GO:0030127; C:COPII vesicle coat; IEA:InterPro.
GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
GO; GO:0006888; P:ER to Golgi vesicle-mediated transport; IEA:InterPro.
GO; GO:0006886; P:intracellular protein transport; IEA:InterPro.
Gene3D; 3.40.50.410; -; 1.
InterPro; IPR006896; Sec23/24_trunk_dom.
InterPro; IPR036465; vWFA_dom_sf.
InterPro; IPR036174; Znf_Sec23_Sec24_sf.
Pfam; PF04811; Sec23_trunk; 1.
SUPFAM; SSF53300; SSF53300; 1.
SUPFAM; SSF82919; SSF82919; 1.
1: Evidence at protein level;
Complete proteome {ECO:0000313|Proteomes:UP000005640};
Proteomics identification {ECO:0000213|EPD:H0Y9J6,
ECO:0000213|MaxQB:H0Y9J6, ECO:0000213|PeptideAtlas:H0Y9J6};
Reference proteome {ECO:0000313|Proteomes:UP000005640}.
DOMAIN 47 141 Sec23_trunk. {ECO:0000259|Pfam:PF04811}.
NON_TER 1 1 {ECO:0000313|Ensembl:ENSP00000424273}.
SEQUENCE 150 AA; 17362 MW; 67BD8C82DD6A8F6E CRC64;
XYRVNDVPEE FLYNPLTRVY GEPHRRPEVQ NATIEFMAPS EYMLRPPQPP VYLFVFDVSH
NAVETGYLNS VCQSLLDNLD LLPGNTRTKI GFITFDSTIH FYGLQESLSQ PQMLIVSDIE
DVFIPMPENL LVNLNESKEV RHIFLPDMFN


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