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Putative ATP-dependent RNA helicase DDX47 (Fragment)

 A0A0V0YC56_TRIPS        Unreviewed;       459 AA.
A0A0V0YC56;
16-MAR-2016, integrated into UniProtKB/TrEMBL.
16-MAR-2016, sequence version 1.
20-DEC-2017, entry version 7.
SubName: Full=Putative ATP-dependent RNA helicase DDX47 {ECO:0000313|EMBL:KRX97552.1};
Flags: Fragment;
Name=DDX47 {ECO:0000313|EMBL:KRX97552.1};
ORFNames=T4E_4334 {ECO:0000313|EMBL:KRX97552.1};
Trichinella pseudospiralis (Parasitic roundworm).
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
Trichinellida; Trichinellidae; Trichinella.
NCBI_TaxID=6337 {ECO:0000313|EMBL:KRX97552.1, ECO:0000313|Proteomes:UP000054815};
[1] {ECO:0000313|EMBL:KRX97552.1, ECO:0000313|Proteomes:UP000054815}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ISS141 {ECO:0000313|EMBL:KRX97552.1};
Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
"Evolution of Trichinella species and genotypes.";
Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
-!- SIMILARITY: Belongs to the DEAD box helicase family.
{ECO:0000256|RuleBase:RU000492}.
-!- CAUTION: The sequence shown here is derived from an
EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
preliminary data. {ECO:0000313|EMBL:KRX97552.1}.
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EMBL; JYDU01000030; KRX97552.1; -; Genomic_DNA.
Proteomes; UP000054815; Unassembled WGS sequence.
GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
CDD; cd00079; HELICc; 1.
InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
InterPro; IPR014001; Helicase_ATP-bd.
InterPro; IPR001650; Helicase_C.
InterPro; IPR027417; P-loop_NTPase.
InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
Pfam; PF00270; DEAD; 1.
Pfam; PF00271; Helicase_C; 1.
SMART; SM00487; DEXDc; 1.
SMART; SM00490; HELICc; 1.
SUPFAM; SSF52540; SSF52540; 1.
PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
PROSITE; PS51194; HELICASE_CTER; 1.
3: Inferred from homology;
ATP-binding {ECO:0000256|RuleBase:RU000492,
ECO:0000313|EMBL:KRX97552.1}; Coiled coil {ECO:0000256|SAM:Coils};
Complete proteome {ECO:0000313|Proteomes:UP000054815};
Helicase {ECO:0000256|RuleBase:RU000492, ECO:0000313|EMBL:KRX97552.1};
Hydrolase {ECO:0000256|RuleBase:RU000492,
ECO:0000313|EMBL:KRX97552.1};
Nucleotide-binding {ECO:0000256|RuleBase:RU000492,
ECO:0000313|EMBL:KRX97552.1};
Reference proteome {ECO:0000313|Proteomes:UP000054815};
Signal {ECO:0000256|SAM:SignalP}.
SIGNAL 1 22 {ECO:0000256|SAM:SignalP}.
CHAIN 23 459 {ECO:0000256|SAM:SignalP}.
/FTId=PRO_5006873174.
DOMAIN 44 215 Helicase ATP-binding.
{ECO:0000259|PROSITE:PS51192}.
DOMAIN 261 425 Helicase C-terminal.
{ECO:0000259|PROSITE:PS51194}.
COILED 402 436 {ECO:0000256|SAM:Coils}.
NON_TER 1 1 {ECO:0000313|EMBL:KRX97552.1}.
SEQUENCE 459 AA; 51590 MW; 047F9A483D41D654 CRC64;
LNGKNGTLFT ILIACFTKGV VPVLCEACKQ LNWTEATKVQ VEAIPLALQG RDVIGLAETG
SGKTAAFALP ILQALLEHPQ RLFALVLTPT RELAYQIAEQ FEALGACIGI KVAVIVGGVD
MVTQALCLAK KPHVIVATPG RLVDHLENTK GFNLRSLKYL VMDEADRILD MDFESEVNKI
LQVIPRERKT YLFSATMTKK VSKLQRASLH DPVKVEVSSK YQTVDKLQQH YIFIPQKFKV
SELHTNNFYS GNFVLFTEDC YLVYILNEMA GKSCIVFTST CANSLRTALL LRNLGFTAVP
LHGQMSQAKR LGALNKFKAK DRSILIATDV ASRGLDIPHV DLVINFDIPT HSKDYIHRVG
RTARAGRAGI SITFVTQYRI EYLLGKQLPL YKTEEPEVLS LLERVTEANR IAKMQVKELE
DKKRMNKKRN REAQNEDDDD GDTEDPTKNF RKRLKKKKK


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