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RCG62480 (Toll-like receptor 2 variant 1) (Toll-like receptor 2 variant 2)

 Q6YGU2_RAT              Unreviewed;       784 AA.
Q6YGU2;
05-JUL-2004, integrated into UniProtKB/TrEMBL.
05-JUL-2004, sequence version 1.
23-MAY-2018, entry version 119.
SubName: Full=RCG62480 {ECO:0000313|EMBL:EDM00832.1};
SubName: Full=Toll-like receptor 2 variant 1 {ECO:0000313|EMBL:AAN86524.1};
SubName: Full=Toll-like receptor 2 variant 2 {ECO:0000313|EMBL:AAN86525.1};
Name=Tlr2 {ECO:0000313|RGD:735138};
ORFNames=rCG_62480 {ECO:0000313|EMBL:EDM00832.1};
Rattus norvegicus (Rat).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
NCBI_TaxID=10116 {ECO:0000313|EMBL:AAN86525.1};
[1] {ECO:0000313|EMBL:AAN86525.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Wistar {ECO:0000313|EMBL:AAN86525.1};
TISSUE=Spleen {ECO:0000313|EMBL:AAN86525.1};
Li Y., Ji A., Schafer M.K.;
"Molecular cloning and regulation of toll-like receptor 2 mRNA in rat
spleen.";
Submitted (SEP-2002) to the EMBL/GenBank/DDBJ databases.
[2] {ECO:0000313|EMBL:EDM00832.1}
NUCLEOTIDE SEQUENCE.
STRAIN=BN {ECO:0000313|EMBL:EDM00832.1};
PubMed=15632090; DOI=10.1101/gr.2889405;
Florea L., Di Francesco V., Miller J., Turner R., Yao A., Harris M.,
Walenz B., Mobarry C., Merkulov G.V., Charlab R., Dew I., Deng Z.,
Istrail S., Li P., Sutton G.;
"Gene and alternative splicing annotation with AIR.";
Genome Res. 15:54-66(2005).
[3] {ECO:0000313|EMBL:EDM00832.1}
NUCLEOTIDE SEQUENCE.
STRAIN=BN {ECO:0000313|EMBL:EDM00832.1};
Mural R.J., Li P.W., Adams M.D., Amanatides P.G., Baden-Tillson H.,
Barnstead M., Chin S.H., Dew I., Evans C.A., Ferriera S., Flanigan M.,
Fosler C., Glodek A., Gu Z., Holt R.A., Jennings D., Kraft C.L.,
Lu F., Nguyen T., Nusskern D.R., Pfannkoch C.M., Sitter C.,
Sutton G.G., Venter J.C., Wang Z., Woodage T., Zheng X.H., Zhong F.;
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
-!- SIMILARITY: Belongs to the Toll-like receptor family.
{ECO:0000256|SAAS:SAAS00598595}.
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EMBL; AY151255; AAN86524.1; -; mRNA.
EMBL; AY151256; AAN86525.1; -; mRNA.
EMBL; CH473976; EDM00832.1; -; Genomic_DNA.
RefSeq; NP_942064.1; NM_198769.2.
UniGene; Rn.46387; -.
SMR; Q6YGU2; -.
GeneID; 310553; -.
KEGG; rno:310553; -.
UCSC; RGD:735138; rat.
CTD; 7097; -.
RGD; 735138; Tlr2.
eggNOG; KOG4641; Eukaryota.
eggNOG; COG4886; LUCA.
HOGENOM; HOG000110611; -.
HOVERGEN; HBG108574; -.
KO; K10159; -.
GO; GO:0044297; C:cell body; IDA:RGD.
GO; GO:0042995; C:cell projection; IDA:RGD.
GO; GO:0009986; C:cell surface; IDA:RGD.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0071723; F:lipopeptide binding; IMP:RGD.
GO; GO:0038023; F:signaling receptor activity; TAS:RGD.
GO; GO:0032289; P:central nervous system myelin formation; IDA:RGD.
GO; GO:0006955; P:immune response; NAS:RGD.
GO; GO:0006954; P:inflammatory response; IDA:RGD.
GO; GO:0045087; P:innate immune response; IEA:UniProtKB-KW.
GO; GO:0006691; P:leukotriene metabolic process; IDA:RGD.
GO; GO:0001774; P:microglial cell activation; IDA:RGD.
GO; GO:0002755; P:MyD88-dependent toll-like receptor signaling pathway; IEA:InterPro.
GO; GO:0008285; P:negative regulation of cell proliferation; IDA:RGD.
GO; GO:0046209; P:nitric oxide metabolic process; IDA:RGD.
GO; GO:0050729; P:positive regulation of inflammatory response; IEA:InterPro.
GO; GO:0032733; P:positive regulation of interleukin-10 production; IDA:RGD.
GO; GO:0048714; P:positive regulation of oligodendrocyte differentiation; IDA:RGD.
GO; GO:0050707; P:regulation of cytokine secretion; IEA:InterPro.
GO; GO:0032493; P:response to bacterial lipoprotein; IDA:RGD.
GO; GO:0070542; P:response to fatty acid; IDA:RGD.
GO; GO:0001666; P:response to hypoxia; IEP:RGD.
GO; GO:0032868; P:response to insulin; IEP:RGD.
GO; GO:0032496; P:response to lipopolysaccharide; IEP:RGD.
GO; GO:0032570; P:response to progesterone; IEP:RGD.
GO; GO:0009636; P:response to toxic substance; IEP:RGD.
GO; GO:0034134; P:toll-like receptor 2 signaling pathway; IEA:InterPro.
GO; GO:0002224; P:toll-like receptor signaling pathway; IDA:RGD.
Gene3D; 3.40.50.10140; -; 1.
Gene3D; 3.80.10.10; -; 1.
InterPro; IPR000483; Cys-rich_flank_reg_C.
InterPro; IPR001611; Leu-rich_rpt.
InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
InterPro; IPR032675; LRR_dom_sf.
InterPro; IPR000157; TIR_dom.
InterPro; IPR027185; TLR2.
InterPro; IPR035897; Toll_tir_struct_dom_sf.
PANTHER; PTHR24365:SF17; PTHR24365:SF17; 1.
Pfam; PF13855; LRR_8; 2.
Pfam; PF01582; TIR; 1.
SMART; SM00369; LRR_TYP; 8.
SMART; SM00082; LRRCT; 1.
SMART; SM00255; TIR; 1.
SUPFAM; SSF52200; SSF52200; 1.
PROSITE; PS51450; LRR; 10.
PROSITE; PS50104; TIR; 1.
2: Evidence at transcript level;
Immunity {ECO:0000256|SAAS:SAAS00472892};
Innate immunity {ECO:0000256|SAAS:SAAS00472892};
Leucine-rich repeat {ECO:0000256|SAAS:SAAS00488662};
Membrane {ECO:0000256|SAAS:SAAS00598878, ECO:0000256|SAM:Phobius};
Receptor {ECO:0000256|SAAS:SAAS00473103, ECO:0000313|EMBL:AAN86525.1};
Repeat {ECO:0000256|SAAS:SAAS00597472};
Signal {ECO:0000256|SAM:SignalP};
Transmembrane {ECO:0000256|SAAS:SAAS00598878,
ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAAS:SAAS00598878,
ECO:0000256|SAM:Phobius}.
SIGNAL 1 16 {ECO:0000256|SAM:SignalP}.
CHAIN 17 784 {ECO:0000256|SAM:SignalP}.
/FTId=PRO_5013533491.
TRANSMEM 589 618 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 639 784 TIR. {ECO:0000259|PROSITE:PS50104}.
SEQUENCE 784 AA; 89413 MW; B2D22A8998EB77F8 CRC64;
MLQALWLFWI LMAVIGLSRE GHSAQASLSC DAAGVCDGSS RSFTSIPSGL TANTKKLDLS
FNKITYIGHG DLRACVNLRV LTLESSGINT IEGDAFYSLG SLEHLDLSNN HLSSLSSSWF
RPLSSLKYLN LMGNPYRTLG ETSLFSNLTN LQTLRVGNVD TFSEIRRIDF AGLTSLNELE
IQVLSLGNYE SRSLQSIRDI YHLTLHLSES AFLLGIFADI LSSVRYLELR DTNLARFQFS
ELSVDEINSP MKKLAFRNAD LTDKSFNELL KLLRYILELM EVEFDHCTLN GVGNFNPSES
DVVRELGKVE TVTIRSLHIP QFYLFYDLST VYSLLEKVKR ITVENSKVFL VPCSFSQHLK
SLEFLDLSEN LMVEEYLKNS ACEGGWPSLQ SLVLSQNHLR SIRKTAEILL TLKNLTALDI
SKNSFQPMPD SCQWPGKMRF LNLSSTGIQA VKTCIPQTLE VLDVSNNNLD SFSLFLPRLQ
ELYISRNKLK TLPEASLFPV LQVMKIRENA ISTFSKDQLG SFPKLETLEA GDNHFICSCE
LLSFILERPA LVHVLVDWPD SYLCDSPPRL HGQRLQDARP SVLECHQAAL VSGVCCALLL
LILLLGALCY HFHGLWYLRM MWAWLRAKRK PKKAPCRDLC YDAFVSYSEQ DSYWVENLMV
QQLENSDPPF KLCLHKRDFV PGKWIIDNII DSIEKSHKTV FVLSENFVRS EWCKYELDFS
HFRLFDENND AAILVLLEPI EKKAIPQRFC KLRKIMNTKT YLEWPLDEGQ REVFWANLRT
AIKS


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