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RCG62480 (Toll-like receptor 2 variant 1) (Toll-like receptor 2 variant 2)

 Q6YGU2_RAT              Unreviewed;       784 AA.
Q6YGU2;
05-JUL-2004, integrated into UniProtKB/TrEMBL.
05-JUL-2004, sequence version 1.
25-APR-2018, entry version 118.
SubName: Full=RCG62480 {ECO:0000313|EMBL:EDM00832.1};
SubName: Full=Toll-like receptor 2 variant 1 {ECO:0000313|EMBL:AAN86524.1};
SubName: Full=Toll-like receptor 2 variant 2 {ECO:0000313|EMBL:AAN86525.1};
Name=Tlr2 {ECO:0000313|RGD:735138};
ORFNames=rCG_62480 {ECO:0000313|EMBL:EDM00832.1};
Rattus norvegicus (Rat).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
NCBI_TaxID=10116 {ECO:0000313|EMBL:AAN86525.1};
[1] {ECO:0000313|EMBL:AAN86525.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Wistar {ECO:0000313|EMBL:AAN86525.1};
TISSUE=Spleen {ECO:0000313|EMBL:AAN86525.1};
Li Y., Ji A., Schafer M.K.;
"Molecular cloning and regulation of toll-like receptor 2 mRNA in rat
spleen.";
Submitted (SEP-2002) to the EMBL/GenBank/DDBJ databases.
[2] {ECO:0000313|EMBL:EDM00832.1}
NUCLEOTIDE SEQUENCE.
STRAIN=BN {ECO:0000313|EMBL:EDM00832.1};
PubMed=15632090; DOI=10.1101/gr.2889405;
Florea L., Di Francesco V., Miller J., Turner R., Yao A., Harris M.,
Walenz B., Mobarry C., Merkulov G.V., Charlab R., Dew I., Deng Z.,
Istrail S., Li P., Sutton G.;
"Gene and alternative splicing annotation with AIR.";
Genome Res. 15:54-66(2005).
[3] {ECO:0000313|EMBL:EDM00832.1}
NUCLEOTIDE SEQUENCE.
STRAIN=BN {ECO:0000313|EMBL:EDM00832.1};
Mural R.J., Li P.W., Adams M.D., Amanatides P.G., Baden-Tillson H.,
Barnstead M., Chin S.H., Dew I., Evans C.A., Ferriera S., Flanigan M.,
Fosler C., Glodek A., Gu Z., Holt R.A., Jennings D., Kraft C.L.,
Lu F., Nguyen T., Nusskern D.R., Pfannkoch C.M., Sitter C.,
Sutton G.G., Venter J.C., Wang Z., Woodage T., Zheng X.H., Zhong F.;
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
-!- SIMILARITY: Belongs to the Toll-like receptor family.
{ECO:0000256|SAAS:SAAS00598595}.
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EMBL; AY151255; AAN86524.1; -; mRNA.
EMBL; AY151256; AAN86525.1; -; mRNA.
EMBL; CH473976; EDM00832.1; -; Genomic_DNA.
RefSeq; NP_942064.1; NM_198769.2.
UniGene; Rn.46387; -.
SMR; Q6YGU2; -.
GeneID; 310553; -.
KEGG; rno:310553; -.
UCSC; RGD:735138; rat.
CTD; 7097; -.
RGD; 735138; Tlr2.
eggNOG; KOG4641; Eukaryota.
eggNOG; COG4886; LUCA.
HOGENOM; HOG000110611; -.
HOVERGEN; HBG108574; -.
KO; K10159; -.
GO; GO:0044297; C:cell body; IDA:RGD.
GO; GO:0042995; C:cell projection; IDA:RGD.
GO; GO:0009986; C:cell surface; IDA:RGD.
GO; GO:0005737; C:cytoplasm; ISO:RGD.
GO; GO:0009897; C:external side of plasma membrane; ISO:RGD.
GO; GO:0005794; C:Golgi apparatus; ISO:RGD.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0031226; C:intrinsic component of plasma membrane; ISO:RGD.
GO; GO:0045121; C:membrane raft; ISO:RGD.
GO; GO:0005886; C:plasma membrane; ISO:RGD.
GO; GO:0035354; C:Toll-like receptor 1-Toll-like receptor 2 protein complex; ISO:RGD.
GO; GO:0035355; C:Toll-like receptor 2-Toll-like receptor 6 protein complex; ISO:RGD.
GO; GO:0042498; F:diacyl lipopeptide binding; ISO:RGD.
GO; GO:0071723; F:lipopeptide binding; IMP:RGD.
GO; GO:0001530; F:lipopolysaccharide binding; ISO:RGD.
GO; GO:0070891; F:lipoteichoic acid binding; ISO:RGD.
GO; GO:0042834; F:peptidoglycan binding; ISO:RGD.
GO; GO:0046982; F:protein heterodimerization activity; ISO:RGD.
GO; GO:0004872; F:receptor activity; ISO:RGD.
GO; GO:0008329; F:signaling pattern recognition receptor activity; ISO:RGD.
GO; GO:0035325; F:Toll-like receptor binding; ISO:RGD.
GO; GO:0042497; F:triacyl lipopeptide binding; ISO:RGD.
GO; GO:0001775; P:cell activation; ISO:RGD.
GO; GO:0002752; P:cell surface pattern recognition receptor signaling pathway; ISO:RGD.
GO; GO:0071221; P:cellular response to bacterial lipopeptide; ISO:RGD.
GO; GO:0071726; P:cellular response to diacyl bacterial lipopeptide; ISO:RGD.
GO; GO:0071223; P:cellular response to lipoteichoic acid; ISO:RGD.
GO; GO:0071224; P:cellular response to peptidoglycan; ISO:RGD.
GO; GO:0071727; P:cellular response to triacyl bacterial lipopeptide; ISO:RGD.
GO; GO:0032289; P:central nervous system myelin formation; IDA:RGD.
GO; GO:0042892; P:chloramphenicol transport; ISO:RGD.
GO; GO:0002374; P:cytokine secretion involved in immune response; ISO:RGD.
GO; GO:0050830; P:defense response to Gram-positive bacterium; ISO:RGD.
GO; GO:0042496; P:detection of diacyl bacterial lipopeptide; ISO:RGD.
GO; GO:0042495; P:detection of triacyl bacterial lipopeptide; ISO:RGD.
GO; GO:0007252; P:I-kappaB phosphorylation; ISO:RGD.
GO; GO:0006955; P:immune response; NAS:RGD.
GO; GO:0052063; P:induction by symbiont of defense-related host nitric oxide production; ISO:RGD.
GO; GO:0006954; P:inflammatory response; IDA:RGD.
GO; GO:0045087; P:innate immune response; IEA:UniProtKB-KW.
GO; GO:0032613; P:interleukin-10 production; ISO:RGD.
GO; GO:0007612; P:learning; ISO:RGD.
GO; GO:0006691; P:leukotriene metabolic process; IDA:RGD.
GO; GO:0014005; P:microglia development; ISO:RGD.
GO; GO:0001774; P:microglial cell activation; IDA:RGD.
GO; GO:0002755; P:MyD88-dependent toll-like receptor signaling pathway; ISO:RGD.
GO; GO:0030837; P:negative regulation of actin filament polymerization; ISO:RGD.
GO; GO:0008285; P:negative regulation of cell proliferation; IDA:RGD.
GO; GO:0044130; P:negative regulation of growth of symbiont in host; ISO:RGD.
GO; GO:0032695; P:negative regulation of interleukin-12 production; ISO:RGD.
GO; GO:0032700; P:negative regulation of interleukin-17 production; ISO:RGD.
GO; GO:0050765; P:negative regulation of phagocytosis; ISO:RGD.
GO; GO:0051964; P:negative regulation of synapse assembly; ISO:RGD.
GO; GO:0046209; P:nitric oxide metabolic process; IDA:RGD.
GO; GO:0032722; P:positive regulation of chemokine production; ISO:RGD.
GO; GO:0050715; P:positive regulation of cytokine secretion; ISO:RGD.
GO; GO:0070374; P:positive regulation of ERK1 and ERK2 cascade; ISO:RGD.
GO; GO:0010628; P:positive regulation of gene expression; ISO:RGD.
GO; GO:0050729; P:positive regulation of inflammatory response; ISO:RGD.
GO; GO:0032728; P:positive regulation of interferon-beta production; ISO:RGD.
GO; GO:0050718; P:positive regulation of interleukin-1 beta secretion; ISO:RGD.
GO; GO:0032733; P:positive regulation of interleukin-10 production; IDA:RGD.
GO; GO:0032735; P:positive regulation of interleukin-12 production; ISO:RGD.
GO; GO:0032741; P:positive regulation of interleukin-18 production; ISO:RGD.
GO; GO:0032755; P:positive regulation of interleukin-6 production; ISO:RGD.
GO; GO:0032757; P:positive regulation of interleukin-8 production; ISO:RGD.
GO; GO:2000484; P:positive regulation of interleukin-8 secretion; ISO:RGD.
GO; GO:0002687; P:positive regulation of leukocyte migration; ISO:RGD.
GO; GO:0060907; P:positive regulation of macrophage cytokine production; ISO:RGD.
GO; GO:0042346; P:positive regulation of NF-kappaB import into nucleus; ISO:RGD.
GO; GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; ISO:RGD.
GO; GO:1901224; P:positive regulation of NIK/NF-kappaB signaling; ISO:RGD.
GO; GO:0045429; P:positive regulation of nitric oxide biosynthetic process; ISO:RGD.
GO; GO:0051770; P:positive regulation of nitric-oxide synthase biosynthetic process; ISO:RGD.
GO; GO:0048714; P:positive regulation of oligodendrocyte differentiation; IDA:RGD.
GO; GO:0034123; P:positive regulation of toll-like receptor signaling pathway; ISO:RGD.
GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; ISO:RGD.
GO; GO:0042535; P:positive regulation of tumor necrosis factor biosynthetic process; ISO:RGD.
GO; GO:0032760; P:positive regulation of tumor necrosis factor production; ISO:RGD.
GO; GO:1904469; P:positive regulation of tumor necrosis factor secretion; ISO:RGD.
GO; GO:0030177; P:positive regulation of Wnt signaling pathway; ISO:RGD.
GO; GO:1904417; P:positive regulation of xenophagy; ISO:RGD.
GO; GO:0002730; P:regulation of dendritic cell cytokine production; ISO:RGD.
GO; GO:0032493; P:response to bacterial lipoprotein; IDA:RGD.
GO; GO:0009617; P:response to bacterium; ISO:RGD.
GO; GO:0070542; P:response to fatty acid; IDA:RGD.
GO; GO:0001666; P:response to hypoxia; IEP:RGD.
GO; GO:0032868; P:response to insulin; IEP:RGD.
GO; GO:0032496; P:response to lipopolysaccharide; IEP:RGD.
GO; GO:0002238; P:response to molecule of fungal origin; ISO:RGD.
GO; GO:0032494; P:response to peptidoglycan; ISO:RGD.
GO; GO:0032570; P:response to progesterone; IEP:RGD.
GO; GO:0009636; P:response to toxic substance; IEP:RGD.
GO; GO:0034134; P:toll-like receptor 2 signaling pathway; IEA:InterPro.
GO; GO:0002224; P:toll-like receptor signaling pathway; IDA:RGD.
GO; GO:0032640; P:tumor necrosis factor production; ISO:RGD.
Gene3D; 3.40.50.10140; -; 1.
Gene3D; 3.80.10.10; -; 1.
InterPro; IPR000483; Cys-rich_flank_reg_C.
InterPro; IPR001611; Leu-rich_rpt.
InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
InterPro; IPR032675; LRR_dom_sf.
InterPro; IPR000157; TIR_dom.
InterPro; IPR027185; TLR2.
InterPro; IPR035897; Toll_tir_struct_dom_sf.
PANTHER; PTHR24365:SF17; PTHR24365:SF17; 1.
Pfam; PF13855; LRR_8; 2.
Pfam; PF01582; TIR; 1.
SMART; SM00369; LRR_TYP; 8.
SMART; SM00082; LRRCT; 1.
SMART; SM00255; TIR; 1.
SUPFAM; SSF52200; SSF52200; 1.
PROSITE; PS51450; LRR; 10.
PROSITE; PS50104; TIR; 1.
2: Evidence at transcript level;
Immunity {ECO:0000256|SAAS:SAAS00472892};
Innate immunity {ECO:0000256|SAAS:SAAS00472892};
Leucine-rich repeat {ECO:0000256|SAAS:SAAS00488662};
Membrane {ECO:0000256|SAAS:SAAS00598878, ECO:0000256|SAM:Phobius};
Receptor {ECO:0000256|SAAS:SAAS00473103, ECO:0000313|EMBL:AAN86525.1};
Repeat {ECO:0000256|SAAS:SAAS00597472};
Signal {ECO:0000256|SAM:SignalP};
Transmembrane {ECO:0000256|SAAS:SAAS00598878,
ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAAS:SAAS00598878,
ECO:0000256|SAM:Phobius}.
SIGNAL 1 16 {ECO:0000256|SAM:SignalP}.
CHAIN 17 784 {ECO:0000256|SAM:SignalP}.
/FTId=PRO_5013533491.
TRANSMEM 589 618 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 639 784 TIR. {ECO:0000259|PROSITE:PS50104}.
SEQUENCE 784 AA; 89413 MW; B2D22A8998EB77F8 CRC64;
MLQALWLFWI LMAVIGLSRE GHSAQASLSC DAAGVCDGSS RSFTSIPSGL TANTKKLDLS
FNKITYIGHG DLRACVNLRV LTLESSGINT IEGDAFYSLG SLEHLDLSNN HLSSLSSSWF
RPLSSLKYLN LMGNPYRTLG ETSLFSNLTN LQTLRVGNVD TFSEIRRIDF AGLTSLNELE
IQVLSLGNYE SRSLQSIRDI YHLTLHLSES AFLLGIFADI LSSVRYLELR DTNLARFQFS
ELSVDEINSP MKKLAFRNAD LTDKSFNELL KLLRYILELM EVEFDHCTLN GVGNFNPSES
DVVRELGKVE TVTIRSLHIP QFYLFYDLST VYSLLEKVKR ITVENSKVFL VPCSFSQHLK
SLEFLDLSEN LMVEEYLKNS ACEGGWPSLQ SLVLSQNHLR SIRKTAEILL TLKNLTALDI
SKNSFQPMPD SCQWPGKMRF LNLSSTGIQA VKTCIPQTLE VLDVSNNNLD SFSLFLPRLQ
ELYISRNKLK TLPEASLFPV LQVMKIRENA ISTFSKDQLG SFPKLETLEA GDNHFICSCE
LLSFILERPA LVHVLVDWPD SYLCDSPPRL HGQRLQDARP SVLECHQAAL VSGVCCALLL
LILLLGALCY HFHGLWYLRM MWAWLRAKRK PKKAPCRDLC YDAFVSYSEQ DSYWVENLMV
QQLENSDPPF KLCLHKRDFV PGKWIIDNII DSIEKSHKTV FVLSENFVRS EWCKYELDFS
HFRLFDENND AAILVLLEPI EKKAIPQRFC KLRKIMNTKT YLEWPLDEGQ REVFWANLRT
AIKS


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