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RISC-loading complex subunit TARBP2

 I3M2Q9_ICTTR            Unreviewed;       275 AA.
I3M2Q9;
11-JUL-2012, integrated into UniProtKB/TrEMBL.
22-NOV-2017, sequence version 2.
23-MAY-2018, entry version 44.
SubName: Full=TARBP2, RISC loading complex RNA binding subunit {ECO:0000313|Ensembl:ENSSTOP00000003291};
Name=TARBP2 {ECO:0000313|Ensembl:ENSSTOP00000003291};
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel)
(Spermophilus tridecemlineatus).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha;
Sciuridae; Xerinae; Marmotini; Ictidomys.
NCBI_TaxID=43179 {ECO:0000313|Ensembl:ENSSTOP00000003291, ECO:0000313|Proteomes:UP000005215};
[1] {ECO:0000313|Ensembl:ENSSTOP00000003291}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
The Broad Institute Genome Assembly & Analysis Group;
Computational R&D Group;
and Sequencing Platform;
Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
MacCallum I., Young S., Walker B.J., Lindblad-Toh K.;
"The Draft Genome of Spermophilus tridecemlineatus.";
Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases.
[2] {ECO:0000313|Ensembl:ENSSTOP00000003291}
IDENTIFICATION.
Ensembl;
Submitted (MAY-2012) to UniProtKB.
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EMBL; AGTP01037486; -; NOT_ANNOTATED_CDS; Genomic_DNA.
STRING; 43179.ENSSTOP00000003291; -.
Ensembl; ENSSTOT00000003676; ENSSTOP00000003291; ENSSTOG00000003678.
eggNOG; KOG3732; Eukaryota.
eggNOG; ENOG410XSCK; LUCA.
GeneTree; ENSGT00900000141030; -.
InParanoid; I3M2Q9; -.
OrthoDB; EOG091G0I2L; -.
TreeFam; TF315953; -.
Proteomes; UP000005215; Unassembled WGS sequence.
GO; GO:0070578; C:RISC-loading complex; IEA:InterPro.
GO; GO:0003725; F:double-stranded RNA binding; IEA:InterPro.
GO; GO:0070883; F:pre-miRNA binding; IEA:InterPro.
GO; GO:0035197; F:siRNA binding; IEA:InterPro.
GO; GO:1903798; P:regulation of production of miRNAs involved in gene silencing by miRNA; IEA:InterPro.
GO; GO:0090065; P:regulation of production of siRNA involved in RNA interference; IEA:InterPro.
GO; GO:0046782; P:regulation of viral transcription; IEA:InterPro.
InterPro; IPR014720; dsRBD_dom.
InterPro; IPR028605; TRBP2.
PANTHER; PTHR10910:SF61; PTHR10910:SF61; 1.
Pfam; PF00035; dsrm; 1.
SMART; SM00358; DSRM; 2.
PROSITE; PS50137; DS_RBD; 2.
4: Predicted;
Complete proteome {ECO:0000313|Proteomes:UP000005215};
Reference proteome {ECO:0000313|Proteomes:UP000005215};
RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00266}.
DOMAIN 68 136 DRBM. {ECO:0000259|PROSITE:PS50137}.
DOMAIN 202 270 DRBM. {ECO:0000259|PROSITE:PS50137}.
SEQUENCE 275 AA; 29399 MW; 76F09B3BDEF25CFD CRC64;
MSEEEQGSGT TTGCRLPSSF SPPDSSLPEE VPVFAAVAVA APVPSTVLIR SPPMEMQPPV
SPQQSECNPV GALQELVVQK GWRLPEYTVT QESGPAHRKE FTMTCRVERF IEIGSGTSKK
LAKRNAAAKM LLRVHTVPLD ARDGNEAEPD DDHFSIGVGS RLDGLRNRGP GCTWDSLRNS
VGEKILSLRS CSLGSLGALG SACCSVLSEL SEEQAFHVSY LDIEELSLSG LCQCLVELST
QPATVCHGSA TTREAARGEA ARRALQYLKI MAGSK


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