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Ras-related and estrogen-regulated growth inhibitor

 RERG_HUMAN              Reviewed;         199 AA.
Q96A58; B2R9R0; B4DI02;
20-DEC-2005, integrated into UniProtKB/Swiss-Prot.
01-DEC-2001, sequence version 1.
18-JUL-2018, entry version 146.
RecName: Full=Ras-related and estrogen-regulated growth inhibitor;
Name=RERG;
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), FUNCTION, INDUCTION,
SUBCELLULAR LOCATION, AND TISSUE SPECIFICITY.
PubMed=11533059; DOI=10.1074/jbc.M105888200;
Finlin B.S., Gau C.-L., Murphy G.A., Shao H., Kimel T., Seitz R.S.,
Chiu Y.-F., Botstein D., Brown P.O., Der C.J., Tamanoi F.,
Andres D.A., Perou C.M.;
"RERG is a novel ras-related, estrogen-regulated and growth-inhibitory
gene in breast cancer.";
J. Biol. Chem. 276:42259-42267(2001).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
TISSUE=Caudate nucleus, and Trachea;
PubMed=14702039; DOI=10.1038/ng1285;
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A.,
Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M.,
Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y.,
Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M.,
Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K.,
Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S.,
Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J.,
Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y.,
Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N.,
Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S.,
Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y.,
Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T.,
Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y.,
Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S.,
Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T.,
Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M.,
Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T.,
Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K.,
Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R.,
Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.;
"Complete sequencing and characterization of 21,243 full-length human
cDNAs.";
Nat. Genet. 36:40-45(2004).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=16541075; DOI=10.1038/nature04569;
Scherer S.E., Muzny D.M., Buhay C.J., Chen R., Cree A., Ding Y.,
Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C.,
Hernandez J., Hodgson A.V., Hume J., Jackson A., Khan Z.M.,
Kovar-Smith C., Lewis L.R., Lozado R.J., Metzker M.L.,
Milosavljevic A., Miner G.R., Montgomery K.T., Morgan M.B.,
Nazareth L.V., Scott G., Sodergren E., Song X.-Z., Steffen D.,
Lovering R.C., Wheeler D.A., Worley K.C., Yuan Y., Zhang Z.,
Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G., Chen Z.,
Clerc-Blankenburg K.P., Davis C., Delgado O., Dinh H.H., Draper H.,
Gonzalez-Garay M.L., Havlak P., Jackson L.R., Jacob L.S., Kelly S.H.,
Li L., Li Z., Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.-V.,
Okwuonu G.O., Pasternak S., Perez L.M., Plopper F.J.H., Santibanez J.,
Shen H., Tabor P.E., Verduzco D., Waldron L., Wang Q., Williams G.A.,
Zhang J., Zhou J., Allen C.C., Amin A.G., Anyalebechi V., Bailey M.,
Barbaria J.A., Bimage K.E., Bryant N.P., Burch P.E., Burkett C.E.,
Burrell K.L., Calderon E., Cardenas V., Carter K., Casias K.,
Cavazos I., Cavazos S.R., Ceasar H., Chacko J., Chan S.N., Chavez D.,
Christopoulos C., Chu J., Cockrell R., Cox C.D., Dang M.,
Dathorne S.R., David R., Davis C.M., Davy-Carroll L., Deshazo D.R.,
Donlin J.E., D'Souza L., Eaves K.A., Egan A., Emery-Cohen A.J.,
Escotto M., Flagg N., Forbes L.D., Gabisi A.M., Garza M., Hamilton C.,
Henderson N., Hernandez O., Hines S., Hogues M.E., Huang M.,
Idlebird D.G., Johnson R., Jolivet A., Jones S., Kagan R., King L.M.,
Leal B., Lebow H., Lee S., LeVan J.M., Lewis L.C., London P.,
Lorensuhewa L.M., Loulseged H., Lovett D.A., Lucier A., Lucier R.L.,
Ma J., Madu R.C., Mapua P., Martindale A.D., Martinez E., Massey E.,
Mawhiney S., Meador M.G., Mendez S., Mercado C., Mercado I.C.,
Merritt C.E., Miner Z.L., Minja E., Mitchell T., Mohabbat F.,
Mohabbat K., Montgomery B., Moore N., Morris S., Munidasa M.,
Ngo R.N., Nguyen N.B., Nickerson E., Nwaokelemeh O.O., Nwokenkwo S.,
Obregon M., Oguh M., Oragunye N., Oviedo R.J., Parish B.J.,
Parker D.N., Parrish J., Parks K.L., Paul H.A., Payton B.A., Perez A.,
Perrin W., Pickens A., Primus E.L., Pu L.-L., Puazo M., Quiles M.M.,
Quiroz J.B., Rabata D., Reeves K., Ruiz S.J., Shao H., Sisson I.,
Sonaike T., Sorelle R.P., Sutton A.E., Svatek A.F., Svetz L.A.,
Tamerisa K.S., Taylor T.R., Teague B., Thomas N., Thorn R.D.,
Trejos Z.Y., Trevino B.K., Ukegbu O.N., Urban J.B., Vasquez L.I.,
Vera V.A., Villasana D.M., Wang L., Ward-Moore S., Warren J.T.,
Wei X., White F., Williamson A.L., Wleczyk R., Wooden H.S.,
Wooden S.H., Yen J., Yoon L., Yoon V., Zorrilla S.E., Nelson D.,
Kucherlapati R., Weinstock G., Gibbs R.A.;
"The finished DNA sequence of human chromosome 12.";
Nature 440:346-351(2006).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L.,
Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R.,
Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V.,
Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R.,
Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H.,
Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G.,
Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W.,
Venter J.C.;
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
TISSUE=Eye;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[6]
X-RAY CRYSTALLOGRAPHY (1.9 ANGSTROMS) OF 1-174 IN COMPLEX WITH GDP.
Structural genomics consortium (SGC);
"The crystal structure of human RERG in the GDP bound state.";
Submitted (OCT-2005) to the PDB data bank.
-!- FUNCTION: Binds GDP/GTP and possesses intrinsic GTPase activity.
Has higher affinity for GDP than for GTP. In cell lines
overexpression leads to a reduction in the rate of proliferation,
colony formation and in tumorigenic potential.
{ECO:0000269|PubMed:11533059}.
-!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:11533059}.
-!- ALTERNATIVE PRODUCTS:
Event=Alternative splicing; Named isoforms=2;
Name=1;
IsoId=Q96A58-1; Sequence=Displayed;
Name=2;
IsoId=Q96A58-2; Sequence=VSP_043393;
Note=No experimental confirmation available.;
-!- TISSUE SPECIFICITY: Detected in heart, brain, placenta, lung,
liver, skin, kidney and pancreas. Detected in estrogen receptor-
positive breast-derived cell lines, but not in estrogen receptor-
negative cell lines. Expression is decreased or lost in a
significant proportion of primary breast tumors with poor clinical
prognosis. {ECO:0000269|PubMed:11533059}.
-!- INDUCTION: Up-regulated by estradiol. Down-regulated by tamoxifen.
{ECO:0000269|PubMed:11533059}.
-!- SIMILARITY: Belongs to the small GTPase superfamily. Ras family.
{ECO:0000305}.
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EMBL; AF339750; AAK98530.1; -; mRNA.
EMBL; AK295343; BAG58314.1; -; mRNA.
EMBL; AK313881; BAG36607.1; -; mRNA.
EMBL; AC007543; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AC022334; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AC092183; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; CH471094; EAW96345.1; -; Genomic_DNA.
EMBL; BC007997; AAH07997.1; -; mRNA.
CCDS; CCDS53753.1; -. [Q96A58-2]
CCDS; CCDS8673.1; -. [Q96A58-1]
RefSeq; NP_001177655.1; NM_001190726.1. [Q96A58-2]
RefSeq; NP_116307.1; NM_032918.2. [Q96A58-1]
UniGene; Hs.199487; -.
PDB; 2ATV; X-ray; 1.90 A; A=1-174.
PDBsum; 2ATV; -.
ProteinModelPortal; Q96A58; -.
SMR; Q96A58; -.
BioGrid; 124423; 2.
IntAct; Q96A58; 1.
STRING; 9606.ENSP00000256953; -.
iPTMnet; Q96A58; -.
PhosphoSitePlus; Q96A58; -.
BioMuta; RERG; -.
DMDM; 74731090; -.
EPD; Q96A58; -.
PaxDb; Q96A58; -.
PeptideAtlas; Q96A58; -.
PRIDE; Q96A58; -.
ProteomicsDB; 75918; -.
ProteomicsDB; 75919; -. [Q96A58-2]
DNASU; 85004; -.
Ensembl; ENST00000256953; ENSP00000256953; ENSG00000134533. [Q96A58-1]
Ensembl; ENST00000536465; ENSP00000438280; ENSG00000134533. [Q96A58-1]
Ensembl; ENST00000538313; ENSP00000441505; ENSG00000134533. [Q96A58-1]
Ensembl; ENST00000546331; ENSP00000444485; ENSG00000134533. [Q96A58-2]
GeneID; 85004; -.
KEGG; hsa:85004; -.
UCSC; uc001rcs.4; human. [Q96A58-1]
CTD; 85004; -.
DisGeNET; 85004; -.
EuPathDB; HostDB:ENSG00000134533.6; -.
GeneCards; RERG; -.
HGNC; HGNC:15980; RERG.
HPA; HPA041387; -.
MIM; 612664; gene.
neXtProt; NX_Q96A58; -.
OpenTargets; ENSG00000134533; -.
PharmGKB; PA34333; -.
eggNOG; KOG0395; Eukaryota.
eggNOG; COG1100; LUCA.
GeneTree; ENSGT00860000133672; -.
HOGENOM; HOG000233973; -.
HOVERGEN; HBG009351; -.
InParanoid; Q96A58; -.
KO; K07855; -.
OMA; GEYDHQA; -.
OrthoDB; EOG091G0M6D; -.
PhylomeDB; Q96A58; -.
TreeFam; TF318030; -.
ChiTaRS; RERG; human.
EvolutionaryTrace; Q96A58; -.
GenomeRNAi; 85004; -.
PRO; PR:Q96A58; -.
Proteomes; UP000005640; Chromosome 12.
Bgee; ENSG00000134533; -.
CleanEx; HS_RERG; -.
ExpressionAtlas; Q96A58; baseline and differential.
Genevisible; Q96A58; HS.
GO; GO:0005829; C:cytosol; IDA:UniProtKB.
GO; GO:0016020; C:membrane; IEA:InterPro.
GO; GO:0005634; C:nucleus; IDA:UniProtKB.
GO; GO:0030331; F:estrogen receptor binding; NAS:UniProtKB.
GO; GO:0019003; F:GDP binding; TAS:UniProtKB.
GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
GO; GO:0003924; F:GTPase activity; IDA:UniProtKB.
GO; GO:0030308; P:negative regulation of cell growth; IDA:UniProtKB.
GO; GO:0008285; P:negative regulation of cell proliferation; IDA:UniProtKB.
GO; GO:0009725; P:response to hormone; IDA:UniProtKB.
GO; GO:0007264; P:small GTPase mediated signal transduction; NAS:UniProtKB.
InterPro; IPR027417; P-loop_NTPase.
InterPro; IPR005225; Small_GTP-bd_dom.
InterPro; IPR001806; Small_GTPase.
InterPro; IPR020849; Small_GTPase_Ras-type.
PANTHER; PTHR24070; PTHR24070; 1.
Pfam; PF00071; Ras; 1.
SUPFAM; SSF52540; SSF52540; 1.
TIGRFAMs; TIGR00231; small_GTP; 1.
PROSITE; PS51421; RAS; 1.
1: Evidence at protein level;
3D-structure; Alternative splicing; Complete proteome; Cytoplasm;
GTP-binding; Nucleotide-binding; Reference proteome.
CHAIN 1 199 Ras-related and estrogen-regulated growth
inhibitor.
/FTId=PRO_0000082723.
NP_BIND 13 20 GTP.
NP_BIND 60 64 GTP.
NP_BIND 118 121 GTP.
COMPBIAS 168 171 Poly-Arg.
VAR_SEQ 21 39 Missing (in isoform 2).
{ECO:0000303|PubMed:14702039}.
/FTId=VSP_043393.
STRAND 7 12 {ECO:0000244|PDB:2ATV}.
HELIX 19 28 {ECO:0000244|PDB:2ATV}.
STRAND 41 49 {ECO:0000244|PDB:2ATV}.
STRAND 52 60 {ECO:0000244|PDB:2ATV}.
HELIX 68 76 {ECO:0000244|PDB:2ATV}.
STRAND 78 85 {ECO:0000244|PDB:2ATV}.
HELIX 89 93 {ECO:0000244|PDB:2ATV}.
HELIX 95 106 {ECO:0000244|PDB:2ATV}.
STRAND 113 118 {ECO:0000244|PDB:2ATV}.
HELIX 120 125 {ECO:0000244|PDB:2ATV}.
HELIX 130 140 {ECO:0000244|PDB:2ATV}.
STRAND 142 146 {ECO:0000244|PDB:2ATV}.
TURN 149 151 {ECO:0000244|PDB:2ATV}.
HELIX 156 171 {ECO:0000244|PDB:2ATV}.
SEQUENCE 199 AA; 22608 MW; 18A0F8BDD40CEAF0 CRC64;
MAKSAEVKLA IFGRAGVGKS ALVVRFLTKR FIWEYDPTLE STYRHQATID DEVVSMEILD
TAGQEDTIQR EGHMRWGEGF VLVYDITDRG SFEEVLPLKN ILDEIKKPKN VTLILVGNKA
DLDHSRQVST EEGEKLATEL ACAFYECSAC TGEGNITEIF YELCREVRRR RMVQGKTRRR
SSTTHVKQAI NKMLTKISS


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