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Ribonucleoside-diphosphate reductase (EC 1.17.4.1)

 A0A0E3EL39_9CAUD        Unreviewed;       765 AA.
A0A0E3EL39;
24-JUN-2015, integrated into UniProtKB/TrEMBL.
24-JUN-2015, sequence version 1.
05-JUL-2017, entry version 16.
RecName: Full=Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410};
EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};
ORFNames=Syn7803C101_167 {ECO:0000313|EMBL:AIX39685.1},
Syn7803C104_170 {ECO:0000313|EMBL:AIX40114.1},
Syn7803C107_168 {ECO:0000313|EMBL:AIX40322.1},
Syn7803C31_171 {ECO:0000313|EMBL:AIX45303.1},
Syn7803C33_167 {ECO:0000313|EMBL:AIX45510.1},
Syn7803C38_166 {ECO:0000313|EMBL:AIX46658.1},
Syn7803C42_168 {ECO:0000313|EMBL:AIX14353.1},
Syn7803C47_169 {ECO:0000313|EMBL:AIX15218.1},
Syn7803C53_167 {ECO:0000313|EMBL:AIX15864.1},
Syn7803C59_168 {ECO:0000313|EMBL:AIX16975.1},
Syn7803C60_166 {ECO:0000313|EMBL:AIX17182.1},
Syn7803C86_169 {ECO:0000313|EMBL:AIX20849.1},
Syn7803C99_166 {ECO:0000313|EMBL:AIX23149.1},
Syn7803US101_166 {ECO:0000313|EMBL:AIX23645.1},
Syn7803US102_168 {ECO:0000313|EMBL:AIX23853.1},
Syn7803US112_171 {ECO:0000313|EMBL:AIX25603.1},
Syn7803US117_166 {ECO:0000313|EMBL:AIX26681.1},
Syn7803US123_169 {ECO:0000313|EMBL:AIX27320.1},
Syn7803US19_166 {ECO:0000313|EMBL:AIX28095.1},
Syn7803US1_168 {ECO:0000313|EMBL:AIX28304.1},
Syn7803US60_166 {ECO:0000313|EMBL:AIX35084.1},
Syn7803US62_166 {ECO:0000313|EMBL:AIX35507.1},
Syn7803US79_168 {ECO:0000313|EMBL:AIX36804.1};
Synechococcus phage ACG-2014a.
Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae;
Tevenvirinae; T4virus.
NCBI_TaxID=1493507 {ECO:0000313|EMBL:AIX14353.1, ECO:0000313|Proteomes:UP000185396};
[1] {ECO:0000313|Proteomes:UP000033004, ECO:0000313|Proteomes:UP000185387, ECO:0000313|Proteomes:UP000185388}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Syn7803C101 {ECO:0000313|EMBL:AIX39685.1},
Syn7803C104 {ECO:0000313|EMBL:AIX40114.1},
Syn7803C107 {ECO:0000313|EMBL:AIX40322.1},
Syn7803C31 {ECO:0000313|EMBL:AIX45303.1},
Syn7803C33 {ECO:0000313|EMBL:AIX45510.1},
Syn7803C38 {ECO:0000313|EMBL:AIX46658.1},
Syn7803C42 {ECO:0000313|EMBL:AIX14353.1},
Syn7803C47 {ECO:0000313|EMBL:AIX15218.1},
Syn7803C53 {ECO:0000313|EMBL:AIX15864.1},
Syn7803C59 {ECO:0000313|EMBL:AIX16975.1},
Syn7803C60 {ECO:0000313|EMBL:AIX17182.1},
Syn7803C86 {ECO:0000313|EMBL:AIX20849.1},
Syn7803C99 {ECO:0000313|EMBL:AIX23149.1},
Syn7803US1 {ECO:0000313|EMBL:AIX28304.1},
Syn7803US101 {ECO:0000313|EMBL:AIX23645.1},
Syn7803US102 {ECO:0000313|EMBL:AIX23853.1},
Syn7803US112 {ECO:0000313|EMBL:AIX25603.1},
Syn7803US117 {ECO:0000313|EMBL:AIX26681.1},
Syn7803US123 {ECO:0000313|EMBL:AIX27320.1},
Syn7803US19 {ECO:0000313|EMBL:AIX28095.1},
Syn7803US60 {ECO:0000313|EMBL:AIX35084.1},
Syn7803US62 {ECO:0000313|EMBL:AIX35507.1}, and
Syn7803US79 {ECO:0000313|EMBL:AIX36804.1};
Gregory A.C., LaButti K., Copeland A., Woyke T., Sullivan M.B.;
"Ecological redundancy of diverse viral populations within a natural
community.";
Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
-!- FUNCTION: Provides the precursors necessary for DNA synthesis.
Catalyzes the biosynthesis of deoxyribonucleotides from the
corresponding ribonucleotides. {ECO:0000256|RuleBase:RU003410}.
-!- CATALYTIC ACTIVITY: 2'-deoxyribonucleoside diphosphate +
thioredoxin disulfide + H(2)O = ribonucleoside diphosphate +
thioredoxin. {ECO:0000256|RuleBase:RU003410}.
-!- PATHWAY: Genetic information processing; DNA replication.
{ECO:0000256|RuleBase:RU003410}.
-!- SIMILARITY: Belongs to the ribonucleoside diphosphate reductase
large chain family. {ECO:0000256|RuleBase:RU003410}.
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EMBL; KJ019026; AIX14353.1; -; Genomic_DNA.
EMBL; KJ019030; AIX15218.1; -; Genomic_DNA.
EMBL; KJ019033; AIX15864.1; -; Genomic_DNA.
EMBL; KJ019038; AIX16975.1; -; Genomic_DNA.
EMBL; KJ019039; AIX17182.1; -; Genomic_DNA.
EMBL; KJ019055; AIX20849.1; -; Genomic_DNA.
EMBL; KJ019065; AIX23149.1; -; Genomic_DNA.
EMBL; KJ019067; AIX23645.1; -; Genomic_DNA.
EMBL; KJ019068; AIX23853.1; -; Genomic_DNA.
EMBL; KJ019076; AIX25603.1; -; Genomic_DNA.
EMBL; KJ019081; AIX26681.1; -; Genomic_DNA.
EMBL; KJ019084; AIX27320.1; -; Genomic_DNA.
EMBL; KJ019087; AIX28095.1; -; Genomic_DNA.
EMBL; KJ019088; AIX28304.1; -; Genomic_DNA.
EMBL; KJ019114; AIX35084.1; -; Genomic_DNA.
EMBL; KJ019116; AIX35507.1; -; Genomic_DNA.
EMBL; KJ019122; AIX36804.1; -; Genomic_DNA.
EMBL; KJ019135; AIX39685.1; -; Genomic_DNA.
EMBL; KJ019137; AIX40114.1; -; Genomic_DNA.
EMBL; KJ019138; AIX40322.1; -; Genomic_DNA.
EMBL; KJ019157; AIX45303.1; -; Genomic_DNA.
EMBL; KJ019158; AIX45510.1; -; Genomic_DNA.
EMBL; KJ019163; AIX46658.1; -; Genomic_DNA.
OrthoDB; VOG0900001D; -.
UniPathway; UPA00326; -.
Proteomes; UP000033004; Genome.
Proteomes; UP000185387; Genome.
Proteomes; UP000185388; Genome.
Proteomes; UP000185389; Genome.
Proteomes; UP000185390; Genome.
Proteomes; UP000185391; Genome.
Proteomes; UP000185392; Genome.
Proteomes; UP000185393; Genome.
Proteomes; UP000185394; Genome.
Proteomes; UP000185396; Genome.
Proteomes; UP000185397; Genome.
Proteomes; UP000185398; Genome.
Proteomes; UP000185399; Genome.
Proteomes; UP000185400; Genome.
Proteomes; UP000185401; Genome.
Proteomes; UP000185402; Genome.
Proteomes; UP000185403; Genome.
Proteomes; UP000185404; Genome.
Proteomes; UP000185405; Genome.
Proteomes; UP000185406; Genome.
Proteomes; UP000185407; Genome.
Proteomes; UP000185408; Genome.
Proteomes; UP000185409; Genome.
GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
GO; GO:0004748; F:ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor; IEA:UniProtKB-EC.
GO; GO:0006260; P:DNA replication; IEA:UniProtKB-UniPathway.
InterPro; IPR005144; ATP-cone_dom.
InterPro; IPR013346; NrdE_NrdA.
InterPro; IPR000788; RNR_lg_C.
InterPro; IPR013509; RNR_lsu_N.
InterPro; IPR008926; RNR_R1-su_N.
Pfam; PF03477; ATP-cone; 1.
Pfam; PF02867; Ribonuc_red_lgC; 1.
Pfam; PF00317; Ribonuc_red_lgN; 1.
PRINTS; PR01183; RIBORDTASEM1.
SUPFAM; SSF48168; SSF48168; 1.
TIGRFAMs; TIGR02506; NrdE_NrdA; 1.
PROSITE; PS51161; ATP_CONE; 1.
PROSITE; PS00089; RIBORED_LARGE; 1.
3: Inferred from homology;
ATP-binding {ECO:0000256|PROSITE-ProRule:PRU00492};
Complete proteome {ECO:0000313|Proteomes:UP000033004};
DNA replication {ECO:0000256|RuleBase:RU003410};
Nucleotide-binding {ECO:0000256|PROSITE-ProRule:PRU00492};
Oxidoreductase {ECO:0000256|RuleBase:RU003410};
Reference proteome {ECO:0000313|Proteomes:UP000033004}.
DOMAIN 4 94 ATP-cone. {ECO:0000259|PROSITE:PS51161}.
SEQUENCE 765 AA; 86755 MW; B0BF98D0AC907DDB CRC64;
MKEVHVIKRD GESEILNLDK IHVMVEHACN GLAGVSESQV EMNANLQFFD GIKTSDIQEI
LIRSANDLIS LDAPNYQFVA ARLLLFSLRK AVYNGHPNGH PPLLEHVEKC ISLGVYDSSI
RSKYDDEEWE KLSSFMDHDR DYLFTYAGVR QVVDKYLVQD RSTGEIYETP QYMYMMVAAT
LFQDDDKFYR LEYVKKYYDA ISKHRLNIPT PIMAGVRTPL RQFASCVLVD VDDTLDSIFS
SDMAIGQYVA QRAGIGINAG RIRGINSKIR GGEVQHTGVV PFLKKFESTV RCCTQNGIRG
GSATVHFPIW HQEIEDILVL KNNKGTEDNR VRKLDYSIQI SKLFYERFIN NEEVSLFSPH
DVPGLYDAFG TDSFDDCYVG YESDESIPRK TIGAQELFLD LLKERAETGR IYIMNIDHCN
SHSSFKDKVN MSNLCQEITL PTDPINHIDG NGEIALCILS AINVGKIKSI DELDELCDLA
VRGLDALIDY QSYPVKAAEV STKNRRSLGI GYIGLAHYLA KNGAKYDSQK AYDLVHKLSE
RFQYALLSAS NRMSMEKGPC GYFGKTKYVD GILPIDTYKN EVDEIVPNDL QCDWEYLRGR
ITEYGLRHST LSAQMPSESS SVVSNATNGI EPPRAYLSIK KSKKGPLKQI VPQYNTLKNN
YTLLWDMHNN DGYIKVTAVM QKFFDQAISG NWSYNPENYP DNEVPVSVMA NDLLTTYKYG
WKTSYYQNTY DAKKDGDEEP TQQNVDALID EILTTEEDDC ESCKI


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