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Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)

 V5P151_LACJH            Unreviewed;       296 AA.
V5P151;
19-FEB-2014, integrated into UniProtKB/TrEMBL.
19-FEB-2014, sequence version 1.
07-JUN-2017, entry version 28.
RecName: Full=Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607};
EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};
AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607};
AltName: Full=16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607};
AltName: Full=16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607};
AltName: Full=S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607};
Name=rsmA {ECO:0000256|HAMAP-Rule:MF_00607};
Synonyms=ksgA {ECO:0000256|HAMAP-Rule:MF_00607};
ORFNames=T285_01145 {ECO:0000313|EMBL:AHA96713.1};
Lactobacillus johnsonii N6.2.
Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
Lactobacillus.
NCBI_TaxID=1408186 {ECO:0000313|EMBL:AHA96713.1, ECO:0000313|Proteomes:UP000018522};
[1] {ECO:0000313|EMBL:AHA96713.1, ECO:0000313|Proteomes:UP000018522}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=N6.2 {ECO:0000313|EMBL:AHA96713.1};
PubMed=24812223;
Leonard M.T., Valladares R.B., Ardissone A., Gonzalez C.F.,
Lorca G.L., Triplett E.W.;
"Complete Genome Sequences of Lactobacillus johnsonii Strain N6.2 and
Lactobacillus reuteri Strain TD1.";
Genome Announc. 2:e00397-14(2014).
-!- FUNCTION: Specifically dimethylates two adjacent adenosines (A1518
and A1519) in the loop of a conserved hairpin near the 3'-end of
16S rRNA in the 30S particle. May play a critical role in
biogenesis of 30S subunits. {ECO:0000256|HAMAP-Rule:MF_00607}.
-!- CATALYTIC ACTIVITY: 4 S-adenosyl-L-methionine +
adenine(1518)/adenine(1519) in 16S rRNA = 4 S-adenosyl-L-
homocysteine + N(6)-dimethyladenine(1518)/N(6)-
dimethyladenine(1519) in 16S rRNA. {ECO:0000256|HAMAP-
Rule:MF_00607}.
-!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00607,
ECO:0000256|SAAS:SAAS00633798}.
-!- SIMILARITY: Belongs to the class I-like SAM-binding
methyltransferase superfamily. rRNA adenine N(6)-methyltransferase
family. RsmA subfamily. {ECO:0000256|HAMAP-Rule:MF_00607,
ECO:0000256|SAAS:SAAS00633788}.
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EMBL; CP006811; AHA96713.1; -; Genomic_DNA.
RefSeq; WP_011161402.1; NC_022909.1.
ProteinModelPortal; V5P151; -.
SMR; V5P151; -.
EnsemblBacteria; AHA96713; AHA96713; T285_01145.
KEGG; ljn:T285_01145; -.
PATRIC; fig|1408186.3.peg.220; -.
KO; K02528; -.
Proteomes; UP000018522; Chromosome.
GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO; GO:0052908; F:16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity; IEA:UniProtKB-EC.
GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
GO; GO:0000179; F:rRNA (adenine-N6,N6-)-dimethyltransferase activity; IEA:UniProtKB-UniRule.
Gene3D; 1.10.8.100; -; 1.
HAMAP; MF_00607; 16SrRNA_methyltr_A; 1.
InterPro; IPR001737; KsgA/Erm.
InterPro; IPR023165; rRNA_Ade_diMease-like.
InterPro; IPR020596; rRNA_Ade_Mease_Trfase_CS.
InterPro; IPR020598; rRNA_Ade_methylase_Trfase_N.
InterPro; IPR011530; rRNA_adenine_dimethylase.
InterPro; IPR029063; SAM-dependent_MTases.
PANTHER; PTHR11727; PTHR11727; 1.
Pfam; PF00398; RrnaAD; 1.
SMART; SM00650; rADc; 1.
SUPFAM; SSF53335; SSF53335; 1.
TIGRFAMs; TIGR00755; ksgA; 1.
PROSITE; PS01131; RRNA_A_DIMETH; 1.
PROSITE; PS51689; SAM_RNA_A_N6_MT; 1.
3: Inferred from homology;
Complete proteome {ECO:0000313|Proteomes:UP000018522};
Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00607,
ECO:0000256|SAAS:SAAS00633772};
Methyltransferase {ECO:0000256|HAMAP-Rule:MF_00607,
ECO:0000256|PROSITE-ProRule:PRU01026, ECO:0000256|SAAS:SAAS00633775,
ECO:0000313|EMBL:AHA96713.1};
RNA-binding {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|PROSITE-
ProRule:PRU01026, ECO:0000256|SAAS:SAAS00633771};
rRNA processing {ECO:0000256|HAMAP-Rule:MF_00607,
ECO:0000256|SAAS:SAAS00644568};
S-adenosyl-L-methionine {ECO:0000256|HAMAP-Rule:MF_00607,
ECO:0000256|PROSITE-ProRule:PRU01026, ECO:0000256|SAAS:SAAS00633825};
Transferase {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|PROSITE-
ProRule:PRU01026, ECO:0000256|SAAS:SAAS00633775,
ECO:0000313|EMBL:AHA96713.1}.
DOMAIN 38 221 rADc. {ECO:0000259|SMART:SM00650}.
BINDING 31 31 S-adenosyl-L-methionine; via carbonyl
oxygen. {ECO:0000256|HAMAP-Rule:MF_00607,
ECO:0000256|PROSITE-ProRule:PRU01026}.
BINDING 33 33 S-adenosyl-L-methionine; via amide
nitrogen. {ECO:0000256|HAMAP-
Rule:MF_00607, ECO:0000256|PROSITE-
ProRule:PRU01026}.
BINDING 58 58 S-adenosyl-L-methionine; via carbonyl
oxygen. {ECO:0000256|HAMAP-Rule:MF_00607,
ECO:0000256|PROSITE-ProRule:PRU01026}.
BINDING 79 79 S-adenosyl-L-methionine.
{ECO:0000256|HAMAP-Rule:MF_00607,
ECO:0000256|PROSITE-ProRule:PRU01026}.
BINDING 111 111 S-adenosyl-L-methionine.
{ECO:0000256|HAMAP-Rule:MF_00607,
ECO:0000256|PROSITE-ProRule:PRU01026}.
BINDING 136 136 S-adenosyl-L-methionine.
{ECO:0000256|HAMAP-Rule:MF_00607,
ECO:0000256|PROSITE-ProRule:PRU01026}.
SEQUENCE 296 AA; 33331 MW; 11F6C96919E08F9A CRC64;
MSNSMPIASP VRTQAIVNRY FMHAKKNLGQ NFLVDLPAIK GIVEAADIQP GDQVIEIGPG
IGSLTEQLLL AGAKVLAYEV DQDLPEILNN ELPQKIDGEE LKDRFKLVMK DVLKANFVED
NDGFLDLSKS VKIVANLPYY ITTPIIFNLI KSDLDFSSLT LMMQKEVAER LVAKPKTKEY
GPLSIAVQSR MNVRLAEEVK STSFMPRPKV DSAVVVLTPL LEKPDINDYA FFDHVVKMCF
AQRRKTLANN LKTLIKDKDE REKLINDLGL DVRVRPEELT LNQFVQLAHL LKDRQA


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