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Ribulose bisphosphate carboxylase small chain (EC 4.1.1.39)

 B3H5S2_ARATH            Unreviewed;       186 AA.
B3H5S2;
22-JUL-2008, integrated into UniProtKB/TrEMBL.
22-JUL-2008, sequence version 1.
25-OCT-2017, entry version 76.
RecName: Full=Ribulose bisphosphate carboxylase small chain {ECO:0000256|RuleBase:RU003627};
EC=4.1.1.39 {ECO:0000256|RuleBase:RU003627};
Name=RBCS3B {ECO:0000313|EMBL:AED94313.1};
Synonyms=MXI10.13 {ECO:0000313|EMBL:AED94313.1},
MXI10_13 {ECO:0000313|EMBL:AED94313.1},
Rubisco small subunit 3B {ECO:0000313|EMBL:AED94313.1};
OrderedLocusNames=At5g38410 {ECO:0000313|Araport:AT5G38410,
ECO:0000313|EMBL:AED94313.1};
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702 {ECO:0000313|EMBL:AED94313.1, ECO:0000313|Proteomes:UP000006548};
[1] {ECO:0000313|EMBL:AED94313.1, ECO:0000313|Proteomes:UP000006548}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
PubMed=11130714; DOI=10.1038/35048507;
Kazusa DNA Research Institute;
Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
European Union Arabidopsis Genome Sequencing Consortium;
Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K.,
Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S.,
Nakazaki N., Naruo K., Okumura S., Shinpo S., Takeuchi C., Wada T.,
Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M.,
Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R.,
Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J.,
Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M.,
Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M.,
Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P.,
Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C.,
Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N.,
Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T.,
Entian K.D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.A.,
McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
Mooijman P., Lankhorst R.K., Weitzenegger T., Bothe G., Rose M.,
Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
Mayer K., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.W.,
Bevan M., Fransz P.;
"Sequence and analysis of chromosome 5 of the plant Arabidopsis
thaliana.";
Nature 408:823-826(2000).
[2] {ECO:0000313|EMBL:AED94313.1, ECO:0000313|Proteomes:UP000006548}
GENOME REANNOTATION.
STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
The Arabidopsis Information Portal (Araport);
Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
-!- FUNCTION: RuBisCO catalyzes two reactions: the carboxylation of D-
ribulose 1,5-bisphosphate, the primary event in carbon dioxide
fixation, as well as the oxidative fragmentation of the pentose
substrate. Both reactions occur simultaneously and in competition
at the same active site. {ECO:0000256|RuleBase:RU003627}.
-!- CATALYTIC ACTIVITY: 2 3-phospho-D-glycerate + 2 H(+) = D-ribulose
1,5-bisphosphate + CO(2) + H(2)O. {ECO:0000256|RuleBase:RU003627,
ECO:0000256|SAAS:SAAS00538365}.
-!- CATALYTIC ACTIVITY: 3-phospho-D-glycerate + 2-phosphoglycolate =
D-ribulose 1,5-bisphosphate + O(2).
{ECO:0000256|RuleBase:RU003627, ECO:0000256|SAAS:SAAS00538362}.
-!- SUBUNIT: 8 large chains + 8 small chains.
{ECO:0000256|RuleBase:RU003627, ECO:0000256|SAAS:SAAS00538374}.
-!- SUBCELLULAR LOCATION: Plastid, chloroplast
{ECO:0000256|SAAS:SAAS00538325}.
-!- SIMILARITY: Belongs to the RuBisCO small chain family.
{ECO:0000256|RuleBase:RU003627, ECO:0000256|SAAS:SAAS00538372}.
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EMBL; CP002688; AED94313.1; -; Genomic_DNA.
RefSeq; NP_001119331.1; NM_001125859.2.
UniGene; At.20381; -.
UniGene; At.24772; -.
UniGene; At.46639; -.
UniGene; At.49098; -.
UniGene; At.49366; -.
UniGene; At.70032; -.
UniGene; At.70053; -.
UniGene; At.71313; -.
UniGene; At.74604; -.
UniGene; At.75410; -.
UniGene; At.75674; -.
ProteinModelPortal; B3H5S2; -.
SMR; B3H5S2; -.
PaxDb; B3H5S2; -.
PRIDE; B3H5S2; -.
EnsemblPlants; AT5G38410.3; AT5G38410.3; AT5G38410.
GeneID; 833828; -.
Gramene; AT5G38410.3; AT5G38410.3; AT5G38410.
Araport; AT5G38410; -.
TAIR; locus:2177426; AT5G38410.
eggNOG; ENOG410IM2H; Eukaryota.
eggNOG; COG4451; LUCA.
HOGENOM; HOG000141332; -.
OMA; EVINTKH; -.
OrthoDB; EOG09360OM1; -.
Proteomes; UP000006548; Chromosome 5.
ExpressionAtlas; B3H5S2; baseline and differential.
GO; GO:0048046; C:apoplast; IDA:TAIR.
GO; GO:0005618; C:cell wall; IDA:TAIR.
GO; GO:0009507; C:chloroplast; IDA:TAIR.
GO; GO:0009941; C:chloroplast envelope; IDA:TAIR.
GO; GO:0009570; C:chloroplast stroma; IDA:TAIR.
GO; GO:0022626; C:cytosolic ribosome; IDA:TAIR.
GO; GO:0016020; C:membrane; IDA:TAIR.
GO; GO:0009579; C:thylakoid; IDA:TAIR.
GO; GO:0004497; F:monooxygenase activity; IEA:UniProtKB-KW.
GO; GO:0016984; F:ribulose-bisphosphate carboxylase activity; IEA:UniProtKB-UniRule.
GO; GO:0015977; P:carbon fixation; IEA:UniProtKB-KW.
GO; GO:0080158; P:chloroplast ribulose bisphosphate carboxylase complex biogenesis; IMP:TAIR.
GO; GO:0009853; P:photorespiration; IEA:UniProtKB-UniRule.
GO; GO:0015979; P:photosynthesis; IMP:TAIR.
GO; GO:0009637; P:response to blue light; IEP:TAIR.
GO; GO:0010218; P:response to far red light; IEP:TAIR.
GO; GO:0010114; P:response to red light; IEP:TAIR.
Gene3D; 3.30.190.10; -; 1.
InterPro; IPR024681; RuBisCO_sc.
InterPro; IPR000894; RuBisCO_sc_dom.
InterPro; IPR024680; RuBisCO_ssu_N.
InterPro; IPR036385; RuBisCO_ssu_sf.
Pfam; PF12338; RbcS; 1.
Pfam; PF00101; RuBisCO_small; 1.
PRINTS; PR00152; RUBISCOSMALL.
SMART; SM00961; RuBisCO_small; 1.
SUPFAM; SSF55239; SSF55239; 1.
3: Inferred from homology;
Carbon dioxide fixation {ECO:0000256|RuleBase:RU003627,
ECO:0000256|SAAS:SAAS00538358};
Chloroplast {ECO:0000256|SAAS:SAAS00538342};
Complete proteome {ECO:0000313|Proteomes:UP000006548};
Lyase {ECO:0000256|RuleBase:RU003627, ECO:0000256|SAAS:SAAS00538373};
Monooxygenase {ECO:0000256|RuleBase:RU003627,
ECO:0000256|SAAS:SAAS00538361};
Oxidoreductase {ECO:0000256|RuleBase:RU003627,
ECO:0000256|SAAS:SAAS00538361};
Photorespiration {ECO:0000256|RuleBase:RU003627,
ECO:0000256|SAAS:SAAS00538330};
Photosynthesis {ECO:0000256|RuleBase:RU003627,
ECO:0000256|SAAS:SAAS00538352};
Plastid {ECO:0000256|SAAS:SAAS00538342};
Reference proteome {ECO:0000313|Proteomes:UP000006548}.
DOMAIN 66 180 RuBisCO_small.
{ECO:0000259|SMART:SM00961}.
SEQUENCE 186 AA; 20840 MW; A03CB892CBE1299F CRC64;
MASSMLSSAA VVTSPAQATM VAPFTGLKSS AAFPVTRKTN KDITSIASNG GRVSCMKVWP
PIGKKKFETL SYLPDLSDVE LAKEVDYLLR NKWIPCVEFE LEVINTKHGF VYREHGNTPG
YYDGRYWTMW KLPLFGCTDS AQVLKEVEEC KKEYPGAFIR IIGFDNTRQV QCISFIAYKP
PSFTEA


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