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Runt-related transcription factor 3 (Acute myeloid leukemia 2 protein) (Core-binding factor subunit alpha-3) (CBF-alpha-3) (Oncogene AML-2) (Polyomavirus enhancer-binding protein 2 alpha C subunit) (PEA2-alpha C) (PEBP2-alpha C) (SL3-3 enhancer factor 1 alpha C subunit) (SL3/AKV core-binding factor alpha C subunit)

 RUNX3_MOUSE             Reviewed;         409 AA.
Q64131; B2FDG4; Q99P92; Q9R199;
02-NOV-2001, integrated into UniProtKB/Swiss-Prot.
27-JUL-2011, sequence version 3.
22-NOV-2017, entry version 147.
RecName: Full=Runt-related transcription factor 3;
AltName: Full=Acute myeloid leukemia 2 protein;
AltName: Full=Core-binding factor subunit alpha-3;
Short=CBF-alpha-3;
AltName: Full=Oncogene AML-2;
AltName: Full=Polyomavirus enhancer-binding protein 2 alpha C subunit;
Short=PEA2-alpha C;
Short=PEBP2-alpha C;
AltName: Full=SL3-3 enhancer factor 1 alpha C subunit;
AltName: Full=SL3/AKV core-binding factor alpha C subunit;
Name=Runx3; Synonyms=Aml2, Cbfa3, Pebp2a3;
Mus musculus (Mouse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
NCBI_TaxID=10090;
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
TISSUE=Spleen;
PubMed=16651517; DOI=10.1073/pnas.0602470103;
Yarmus M., Woolf E., Bernstein Y., Fainaru O., Negreanu V.,
Levanon D., Groner Y.;
"Groucho/transducin-like Enhancer-of-split (TLE)-dependent and
-independent transcriptional regulation by Runx3.";
Proc. Natl. Acad. Sci. U.S.A. 103:7384-7389(2006).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=C57BL/6J;
PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S.,
She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W.,
Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T.,
Zhou S., Teague B., Potamousis K., Churas C., Place M., Herschleb J.,
Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z.,
Lindblad-Toh K., Eichler E.E., Ponting C.P.;
"Lineage-specific biology revealed by a finished genome assembly of
the mouse.";
PLoS Biol. 7:E1000112-E1000112(2009).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.;
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [MRNA] OF 92-167.
PubMed=7607690; DOI=10.1016/0888-7543(95)80185-O;
Wijmenga C., Speck N.A., Dracopoli N.C., Hofker M.H., Liu P.,
Collins F.S.;
"Identification of a new murine runt domain-containing gene, Cbfa3,
and localization of the human homolog, CBFA3, to chromosome 1p35-
pter.";
Genomics 26:611-614(1995).
[5]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-95 (ISOFORM 1).
PubMed=7607689; DOI=10.1016/0888-7543(95)80184-N;
Calabi F., Rhodes M., Williamson P., Boyd Y.;
"Identification and chromosomal mapping of a third mouse runt-like
locus.";
Genomics 26:607-610(1995).
[6]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-95 (ISOFORM 1).
STRAIN=129/Sv;
Negreanu V., Levanon D., Bettoun J.D., Groner Y.;
"The mouse AML2 gene - proximal promoter region.";
Submitted (JUL-1999) to the EMBL/GenBank/DDBJ databases.
[7]
PARTIAL NUCLEOTIDE SEQUENCE [GENOMIC DNA] (ISOFORM 2).
PubMed=11733147; DOI=10.1016/S0378-1119(01)00760-0;
Bangsow C., Rubins N., Glusman G., Bernstein Y., Negreanu V.,
Goldenberg D., Lotem J., Ben-Asher E., Lancet D., Levanon D.,
Groner Y.;
"The RUNX3 gene -- sequence, structure and regulated expression.";
Gene 279:221-232(2001).
[8]
INTERACTION WITH TBX21.
PubMed=21151104; DOI=10.1038/ni.1969;
Lazarevic V., Chen X., Shim J.H., Hwang E.S., Jang E., Bolm A.N.,
Oukka M., Kuchroo V.K., Glimcher L.H.;
"T-bet represses T(H)17 differentiation by preventing Runx1-mediated
activation of the gene encoding RORgammat.";
Nat. Immunol. 12:96-104(2011).
-!- FUNCTION: Binds to the core site of murine Leukemia virus, the
core sequences in the enhancer of the polyomavirus, and also to
the enhancers of the T-cell receptor genes. May be involved in the
control of cellular proliferation and/or differentiation. In
association with ZFHX3, upregulates CDKN1A promoter activity
following TGF-beta stimulation (By similarity).
{ECO:0000250|UniProtKB:Q13761}.
-!- SUBUNIT: Heterodimer of an alpha and a beta subunit. The alpha
subunit binds DNA as a monomer and through the Runt domain. DNA-
binding is increased by heterodimerization. Interacts with TLE1
and SUV39H1. The tyrosine phosphorylated form (via runt domain)
interacts with SRC (via protein kinase domain). Interacts with FYN
and LCK. Interacts with FOXP3. Interacts with ZFHX3. Interacts
with TBX21 (PubMed:21151104). {ECO:0000250|UniProtKB:Q13761,
ECO:0000269|PubMed:21151104}.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q13761}.
Cytoplasm {ECO:0000250|UniProtKB:Q13761}. Note=The tyrosine
phosphorylated form localizes to the cytoplasm. Translocates from
the cytoplasm to the nucleus following TGF-beta stimulation.
{ECO:0000250|UniProtKB:Q13761}.
-!- ALTERNATIVE PRODUCTS:
Event=Alternative splicing; Named isoforms=2;
Name=1;
IsoId=Q64131-1; Sequence=Displayed;
Name=2;
IsoId=Q64131-2; Sequence=VSP_005950;
-!- DOMAIN: A proline/serine/threonine rich region at the C-terminus
is necessary for transcriptional activation of target genes.
-!- PTM: Phosphorylated on tyrosine residues by SRC. Phosphorylated by
LCK and FYN (By similarity). {ECO:0000250}.
-----------------------------------------------------------------------
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EMBL; AF155880; AAD38985.1; -; mRNA.
EMBL; AL731718; CAQ51606.1; -; Genomic_DNA.
EMBL; CU459015; CAQ52301.1; -; Genomic_DNA.
EMBL; CU459014; CAQ52315.1; -; Genomic_DNA.
EMBL; CH466552; EDL29993.1; -; Genomic_DNA.
EMBL; S78518; AAB34843.1; -; Genomic_DNA.
EMBL; AF169246; AAD46381.1; -; Genomic_DNA.
EMBL; AF321443; AAK11181.1; -; Genomic_DNA.
CCDS; CCDS18782.1; -. [Q64131-2]
PIR; A56842; A56842.
PIR; A56843; A56843.
UniGene; Mm.378894; -.
ProteinModelPortal; Q64131; -.
SMR; Q64131; -.
DIP; DIP-60276N; -.
ELM; Q64131; -.
IntAct; Q64131; 1.
STRING; 10090.ENSMUSP00000050353; -.
iPTMnet; Q64131; -.
PhosphoSitePlus; Q64131; -.
EPD; Q64131; -.
PaxDb; Q64131; -.
PRIDE; Q64131; -.
Ensembl; ENSMUST00000119564; ENSMUSP00000113159; ENSMUSG00000070691. [Q64131-1]
UCSC; uc008vgc.1; mouse. [Q64131-1]
MGI; MGI:102672; Runx3.
eggNOG; KOG3982; Eukaryota.
eggNOG; ENOG4111J4Y; LUCA.
GeneTree; ENSGT00390000016964; -.
HOGENOM; HOG000045616; -.
HOVERGEN; HBG060268; -.
InParanoid; Q64131; -.
Reactome; R-MMU-8941855; RUNX3 regulates CDKN1A transcription.
Reactome; R-MMU-8941856; RUNX3 regulates NOTCH signaling.
Reactome; R-MMU-8941858; Regulation of RUNX3 expression and activity.
Reactome; R-MMU-8951430; RUNX3 regulates WNT signaling.
Reactome; R-MMU-8951671; RUNX3 regulates YAP1-mediated transcription.
Reactome; R-MMU-8951936; RUNX3 regulates p14-ARF.
PRO; PR:Q64131; -.
Proteomes; UP000000589; Chromosome 4.
Bgee; ENSMUSG00000070691; -.
CleanEx; MM_RUNX3; -.
ExpressionAtlas; Q64131; baseline and differential.
Genevisible; Q64131; MM.
GO; GO:0005737; C:cytoplasm; ISS:UniProtKB.
GO; GO:0005829; C:cytosol; ISO:MGI.
GO; GO:0043231; C:intracellular membrane-bounded organelle; ISO:MGI.
GO; GO:0000790; C:nuclear chromatin; IDA:BHF-UCL.
GO; GO:0005730; C:nucleolus; ISO:MGI.
GO; GO:0005654; C:nucleoplasm; TAS:Reactome.
GO; GO:0005634; C:nucleus; IDA:MGI.
GO; GO:0005524; F:ATP binding; IEA:InterPro.
GO; GO:0003677; F:DNA binding; IDA:MGI.
GO; GO:0042826; F:histone deacetylase binding; ISO:MGI.
GO; GO:0000977; F:RNA polymerase II regulatory region sequence-specific DNA binding; IDA:BHF-UCL.
GO; GO:0000981; F:RNA polymerase II transcription factor activity, sequence-specific DNA binding; IDA:BHF-UCL.
GO; GO:0046332; F:SMAD binding; ISO:MGI.
GO; GO:0007411; P:axon guidance; IMP:MGI.
GO; GO:0048469; P:cell maturation; IGI:MGI.
GO; GO:0002062; P:chondrocyte differentiation; IGI:MGI.
GO; GO:0031069; P:hair follicle morphogenesis; IMP:MGI.
GO; GO:0030097; P:hemopoiesis; IBA:GO_Central.
GO; GO:0032609; P:interferon-gamma production; IDA:MGI.
GO; GO:0042789; P:mRNA transcription from RNA polymerase II promoter; IDA:BHF-UCL.
GO; GO:0045786; P:negative regulation of cell cycle; IMP:UniProtKB.
GO; GO:0050680; P:negative regulation of epithelial cell proliferation; IMP:UniProtKB.
GO; GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.
GO; GO:0031175; P:neuron projection development; IMP:MGI.
GO; GO:0001503; P:ossification; IBA:GO_Central.
GO; GO:2001238; P:positive regulation of extrinsic apoptotic signaling pathway; IMP:MGI.
GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISO:MGI.
GO; GO:0045893; P:positive regulation of transcription, DNA-templated; ISS:UniProtKB.
GO; GO:0006468; P:protein phosphorylation; ISS:UniProtKB.
GO; GO:0045595; P:regulation of cell differentiation; IBA:GO_Central.
GO; GO:0071559; P:response to transforming growth factor beta; ISS:UniProtKB.
Gene3D; 2.60.40.720; -; 1.
Gene3D; 4.10.770.10; -; 1.
InterPro; IPR000040; AML1_Runt.
InterPro; IPR008967; p53-like_TF_DNA-bd.
InterPro; IPR012346; p53/RUNT-type_TF_DNA-bd_sf.
InterPro; IPR013524; Runt_dom.
InterPro; IPR027384; Runx_central_dom_sf.
InterPro; IPR013711; RunxI_C_dom.
InterPro; IPR016554; TF_Runt-rel_RUNX.
PANTHER; PTHR11950; PTHR11950; 1.
Pfam; PF00853; Runt; 1.
Pfam; PF08504; RunxI; 1.
PIRSF; PIRSF009374; TF_Runt-rel_RUNX; 1.
PRINTS; PR00967; ONCOGENEAML1.
SUPFAM; SSF49417; SSF49417; 1.
PROSITE; PS51062; RUNT; 1.
1: Evidence at protein level;
Activator; Alternative splicing; Complete proteome; Cytoplasm;
DNA-binding; Isopeptide bond; Nucleus; Phosphoprotein;
Reference proteome; Transcription; Transcription regulation;
Ubl conjugation.
CHAIN 1 409 Runt-related transcription factor 3.
/FTId=PRO_0000174663.
DOMAIN 55 183 Runt. {ECO:0000255|PROSITE-
ProRule:PRU00399}.
COMPBIAS 23 28 Poly-Gly.
MOD_RES 241 241 Phosphoserine.
{ECO:0000250|UniProtKB:Q13761}.
CROSSLNK 193 193 Glycyl lysine isopeptide (Lys-Gly)
(interchain with G-Cter in SUMO2).
{ECO:0000250|UniProtKB:Q13761}.
VAR_SEQ 1 5 MRIPV -> MASNSIFDSFPQLYTNLHT (in isoform
2). {ECO:0000305}.
/FTId=VSP_005950.
CONFLICT 227 228 AQ -> PK (in Ref. 1; AAD38985).
{ECO:0000305}.
CONFLICT 234 236 SSD -> FLN (in Ref. 1; AAD38985).
{ECO:0000305}.
SEQUENCE 409 AA; 43518 MW; D2BCEBAF808A315D CRC64;
MRIPVDPSTS RRFTPPSTAF PCGGGGGGKM GENSGALSAQ ATAGPGGRTR PEVRSMVDVL
ADHAGELVRT DSPNFLCSVL PSHWRCNKTL PVAFKVVALG DVPDGTVVTV MAGNDENYSA
ELRNASAVMK NQVARFNDLR FVGRSGRGKS FTLTITVFTN PTQVATYHRA IKVTVDGPRE
PRRHRQKIED QTKAFPDRFG DLRMRVTPST PSPRGSLSTT SHFSSQAQTP IQGSSDLNPF
SDPRQFDRSF PTLQSLTESR FPDPRMHYPG AMSAAFPYSA TPSGTSLGSL SVAGMPASSR
FHHTYLPPPY PGAPQSQSGP FQANPAPYHL FYGASSGSYQ FSMAAAGGGE RSPTRMLTSC
PSGASVSAGN LMNPSLGQAD GVEADGSHSN SPTALSTPGR MDEAVWRPY


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