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SET domain containing 2

 F1MDT8_BOVIN            Unreviewed;      2538 AA.
F1MDT8;
03-MAY-2011, integrated into UniProtKB/TrEMBL.
16-NOV-2011, sequence version 2.
25-OCT-2017, entry version 50.
SubName: Full=SET domain containing 2 {ECO:0000313|Ensembl:ENSBTAP00000003838};
Name=SETD2 {ECO:0000313|Ensembl:ENSBTAP00000003838};
Bos taurus (Bovine).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia;
Pecora; Bovidae; Bovinae; Bos.
NCBI_TaxID=9913 {ECO:0000313|Ensembl:ENSBTAP00000003838, ECO:0000313|Proteomes:UP000009136};
[1] {ECO:0000313|Ensembl:ENSBTAP00000003838, ECO:0000313|Proteomes:UP000009136}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000003838,
ECO:0000313|Proteomes:UP000009136};
PubMed=19393038; DOI=10.1186/gb-2009-10-4-r42;
Zimin A.V., Delcher A.L., Florea L., Kelley D.R., Schatz M.C.,
Puiu D., Hanrahan F., Pertea G., Van Tassell C.P., Sonstegard T.S.,
Marcais G., Roberts M., Subramanian P., Yorke J.A., Salzberg S.L.;
"A whole-genome assembly of the domestic cow, Bos taurus.";
Genome Biol. 10:R42.01-R42.10(2009).
[2] {ECO:0000313|Ensembl:ENSBTAP00000003838}
IDENTIFICATION.
STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000003838};
Ensembl;
Submitted (MAR-2016) to UniProtKB.
-!- CATALYTIC ACTIVITY: S-adenosyl-L-methionine + L-lysine-[histone] =
S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone].
{ECO:0000256|SAAS:SAAS00591578}.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00574581}.
-!- CAUTION: The sequence shown here is derived from an Ensembl
automatic analysis pipeline and should be considered as
preliminary data. {ECO:0000313|Ensembl:ENSBTAP00000003838}.
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EMBL; DAAA02054455; -; NOT_ANNOTATED_CDS; Genomic_DNA.
STRING; 9913.ENSBTAP00000003838; -.
PaxDb; F1MDT8; -.
Ensembl; ENSBTAT00000003838; ENSBTAP00000003838; ENSBTAG00000002948.
eggNOG; KOG4442; Eukaryota.
eggNOG; COG2940; LUCA.
GeneTree; ENSGT00780000121845; -.
InParanoid; F1MDT8; -.
OMA; FIGHDSH; -.
OrthoDB; EOG091G040P; -.
TreeFam; TF106477; -.
Proteomes; UP000009136; Chromosome 22.
Bgee; ENSBTAG00000002948; -.
GO; GO:0005694; C:chromosome; IEA:Ensembl.
GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO; GO:0043014; F:alpha-tubulin binding; IEA:Ensembl.
GO; GO:0046975; F:histone methyltransferase activity (H3-K36 specific); IEA:Ensembl.
GO; GO:0001525; P:angiogenesis; IEA:Ensembl.
GO; GO:0035441; P:cell migration involved in vasculogenesis; IEA:Ensembl.
GO; GO:0060977; P:coronary vasculature morphogenesis; IEA:Ensembl.
GO; GO:0051607; P:defense response to virus; IEA:Ensembl.
GO; GO:0048701; P:embryonic cranial skeleton morphogenesis; IEA:Ensembl.
GO; GO:0060669; P:embryonic placenta morphogenesis; IEA:Ensembl.
GO; GO:0035987; P:endodermal cell differentiation; IEA:Ensembl.
GO; GO:0030900; P:forebrain development; IEA:Ensembl.
GO; GO:0097676; P:histone H3-K36 dimethylation; IEA:Ensembl.
GO; GO:0097198; P:histone H3-K36 trimethylation; IEA:Ensembl.
GO; GO:0048332; P:mesoderm morphogenesis; IEA:Ensembl.
GO; GO:1902850; P:microtubule cytoskeleton organization involved in mitosis; IEA:Ensembl.
GO; GO:0006298; P:mismatch repair; IEA:Ensembl.
GO; GO:0001763; P:morphogenesis of a branching structure; IEA:Ensembl.
GO; GO:0001843; P:neural tube closure; IEA:Ensembl.
GO; GO:0034728; P:nucleosome organization; IEA:Ensembl.
GO; GO:0018026; P:peptidyl-lysine monomethylation; IEA:Ensembl.
GO; GO:0060039; P:pericardium development; IEA:Ensembl.
GO; GO:0032727; P:positive regulation of interferon-alpha production; IEA:Ensembl.
GO; GO:0032465; P:regulation of cytokinesis; IEA:Ensembl.
GO; GO:0010569; P:regulation of double-strand break repair via homologous recombination; IEA:Ensembl.
GO; GO:0010793; P:regulation of mRNA export from nucleus; IEA:Ensembl.
GO; GO:1905634; P:regulation of protein localization to chromatin; IEA:Ensembl.
GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
GO; GO:0034340; P:response to type I interferon; IEA:Ensembl.
GO; GO:0048864; P:stem cell development; IEA:Ensembl.
GO; GO:0006368; P:transcription elongation from RNA polymerase II promoter; IEA:Ensembl.
CDD; cd00201; WW; 1.
InterPro; IPR006560; AWS_dom.
InterPro; IPR003616; Post-SET_dom.
InterPro; IPR001214; SET_dom.
InterPro; IPR013257; SRI.
InterPro; IPR001202; WW_dom.
InterPro; IPR036020; WW_dom_sf.
Pfam; PF00856; SET; 1.
Pfam; PF08236; SRI; 1.
Pfam; PF00397; WW; 1.
SMART; SM00570; AWS; 1.
SMART; SM00508; PostSET; 1.
SMART; SM00317; SET; 1.
SMART; SM00456; WW; 1.
SUPFAM; SSF51045; SSF51045; 1.
PROSITE; PS51215; AWS; 1.
PROSITE; PS50868; POST_SET; 1.
PROSITE; PS50280; SET; 1.
PROSITE; PS01159; WW_DOMAIN_1; 1.
PROSITE; PS50020; WW_DOMAIN_2; 1.
4: Predicted;
Complete proteome {ECO:0000313|Proteomes:UP000009136};
Methyltransferase {ECO:0000256|SAAS:SAAS00590675};
Nucleus {ECO:0000256|SAAS:SAAS00574642};
Reference proteome {ECO:0000313|Proteomes:UP000009136};
S-adenosyl-L-methionine {ECO:0000256|SAAS:SAAS00591079};
Transferase {ECO:0000256|SAAS:SAAS00590675}.
DOMAIN 1468 1522 AWS. {ECO:0000259|PROSITE:PS51215}.
DOMAIN 1524 1641 SET. {ECO:0000259|PROSITE:PS50280}.
DOMAIN 1648 1664 Post-SET. {ECO:0000259|PROSITE:PS50868}.
DOMAIN 2363 2396 WW. {ECO:0000259|PROSITE:PS50020}.
SEQUENCE 2538 AA; 284051 MW; 7ACF263B2D37326D CRC64;
EEENEAKIEN VPKTGFIKGP MFKGVASSRF LPKGTKTKVN LEEQGRQKVS FSFSLTKKTL
QNRFLTALGN EKQNDTPNSP VVPLQVDSTP KVKTDIGDTL STTEESSPPK SRVELGKIHF
KKHLLHVTSR PLLTATTAVA SPSPPMAPLP AVRAESTTVD SPPSSPPPPP PPPQATTPSS
PAPVTEPVAL PHTPVTVLMT APVDVAARAL KEPPVTIVPE SSEVDTKQDP VSNSSEEHIT
HSLNEQADIP SQKEDSHIGK EEETPDSSKS SLGSKKTGSK KKSSQSEGTF LGSESDEDSV
RTSSSQRSHD LKFSANIDRE RDSKKSLATL KSEDLGKSSR SKTERDDKYF SYSKLERDTR
YISSRCRERE RRRSRSRSRS DRGSRTSLSY SRSERSHYYD SDRRYHRSSP YRERTRYSRA
YTDSRARESS DSEDEYKKTY SRRTSSHSSS YRNLRTSSSY SKSDRECKTE SSYLETEKRG
KYSSKLERES KRTSENEAMK RCCSPPNELG FRRGSSYSKH DNNASRYKSA PSKPVSKSDK
FKNSFCCTEL NEETKQSHSF SLQTPCSKGS ELRVISKIPE REKTRSPSPS NRLNDSPTFK
KLDGSPVFKS EFIGHDSHDS IKEVDSLCKV KNDQLRSYCP TELNINGSPG AESDLAAFCT
SKHDTVLMSS DDSVTGSEVS PLVKTCMLSS NGFQNINRCK EKDLDDTCMK HSKSESPFRE
TEPLVSPHQD QLISLPVMTM DYSKTVVKEP VEVRVSCCKT KDSDIYCTSN DNHPSSCHSG
AENIEPLVTK MSSNSFMNVH LKSKTGICDN GNLIDQHSKF ACGEYKQSVG STSSASVNHF
DDLYHTPGSS CIASSLQSLP PGIKVNSLTL LQCGENISPV LDAVPKSKNS EFLKHAEKET
VIEVGSDLPD SGRGFASWDN RHNNGLSEKC VQEAHKEGNS LLPDRRGRPE ISLDEEGGRG
HAHTSDDSEV VFSSCDLNLT MEDSDGITYT LKCDSSGHAS EIVSTVHEDY SGSSESSSDE
SDSEDTDSDD SSIPRNRLQS VVVVPKNSTL TMEETSPCSS RSSQSYRHYS DHWEDERLEP
RRHSYEEKFE SITSKACPQT EKFFFHKAAE KNSEISFIQP SRKQIDNHLP EIAHPQSDGV
DSTSHPDIKS DPLGHSNSEE TVKAKIVSQQ QEELPVYSSD DFEDVSNKSR QQTTFPNRPD
SRLGKTDSSF SSCEISRVDG FRSSEELRNL GWDFSQQEKP TTTYQQPDSS YGACGGHKYQ
QSAEQCSGAR SHWQGNGYWD PRSASRPPGA GVVYDRIQGQ VPDSLTDDRE EEENWDQRGG
SHFSSQSSKF FLSLQKDKGS VQAPEISSNS IKDSLAVNEK KDLLKNLDRN DMKDRGPLKK
RRQELESDSE SDGELQDRKK VRMEIEQGET AVPLGSALVG PSCVMEDFRD PQRWKEYAKQ
GKMPCYFDLI EENVYLTERK KNKSHRDIKR MQCECTPLSK DERAQGEIAC GEDCLNRLLM
IECSSRCPNG DYCSNRRFQR KQHADVEVIL TEKKGWGLRA AKDLPSNTFV LEYCGEVLDH
KEFKARVKEY ARNKNIHYYF MALKNDEIID ATQKGNCSRF MNHSCEPNCE TQKWTVNGQL
RVGFFTTKLV PSGSELTFDY QFQRYGKEAQ KCFCGSANCR GYLGGENRVS IRAAGGKMKK
ERSRKKDSVD GELEALMENG EGLSDKNQVL SLSRLMVRIE TLEQKLTCLK LIQNTHSQSC
LKSFLERHGL SLLWIWMAEL GDGRESNQKL QEEIIKTLEH LPIPTKNMLE ESKVLPIIQR
WSQTKTAIPQ LSEGDGYSSE NTSRAHTPLN TPDPSTKLSA EADTDTPKKL MFRRLKIISE
NSMDSAISDA TSELEGKDGK EDLDQLENVP IEEEEEPQPQ HLLVQQLPEP KVDSDVAAEA
SRLPTSELEA DAELEHKESS GAKLDEPIAE ETPSQDEEEG VSDVESERSQ DPPDKTVDIS
DLATKLLDSW KDLKEVYRIP KKSQTEKEST ITERGRDAVG FRDQTVAPKT PNRSRERDPD
KQTQIKEKRK RRGSLSPPSS AYERGTKRPD DRYDTPTSKK KVRIKDRNKL STEERRKLFE
QEVAQREAQK QQQQMQNLGM TSPLPYDSLG YSAPHHPFAG YPPGYPMQAY VDPSNPNAGK
VLLPTPSMDP VCSPAAYDHS QPLVGHSTEP LAAPPPVPVV PHVAAPVEVS SSQYVAQSDG
VVHQDSSVTV LPVPAPGPVQ GQNYSVWDSN QQSVSVQQQY SPAQSQATIY YQGQACPTVY
GVTSPYSQTT PPIVQSYAQP SLQYIQGQQI FTAHPQGVVV QPTAAVTTIV APGQPQPLQP
PEMVVTNNLL DLPPPSPPKP KTIVLPPNWK TARDPEGKIY YYHVVTRQTQ WDPPTWESPG
DDASLEHEAE MDLGTPTYDE NPMKTSKKPK TAEADTSSEL AKKSKEVFRK EMSQFIVQCL
NPYRKPDCKV GRITTTEDFK HLARKLTHGV MNKELKYCKN PEDLECNENV KHKTKEYIKK
YMQKFGAVYK PKEDTELE


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