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SET domain containing 2

 G1M2A2_AILME            Unreviewed;      2540 AA.
G1M2A2;
19-OCT-2011, integrated into UniProtKB/TrEMBL.
19-OCT-2011, sequence version 1.
25-OCT-2017, entry version 36.
SubName: Full=SET domain containing 2 {ECO:0000313|Ensembl:ENSAMEP00000013463};
Name=SETD2 {ECO:0000313|Ensembl:ENSAMEP00000013463};
Ailuropoda melanoleuca (Giant panda).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae;
Ailuropoda.
NCBI_TaxID=9646 {ECO:0000313|Ensembl:ENSAMEP00000013463, ECO:0000313|Proteomes:UP000008912};
[1] {ECO:0000313|Ensembl:ENSAMEP00000013463}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=20010809; DOI=10.1038/nature08696;
Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q.,
Li B., Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H.,
Jian M., Li J., Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z.,
Ryder O.A., Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X.,
Guo X., Wang B., Hou R., Shen F., Mu B., Ni P., Lin R., Qian W.,
Wang G., Yu C., Nie W., Wang J., Wu Z., Liang H., Min J., Wu Q.,
Cheng S., Ruan J., Wang M., Shi Z., Wen M., Liu B., Ren X., Zheng H.,
Dong D., Cook K., Shan G., Zhang H., Kosiol C., Xie X., Lu Z.,
Zheng H., Li Y., Steiner C.C., Lam T.T., Lin S., Zhang Q., Li G.,
Tian J., Gong T., Liu H., Zhang D., Fang L., Ye C., Zhang J., Hu W.,
Xu A., Ren Y., Zhang G., Bruford M.W., Li Q., Ma L., Guo Y., An N.,
Hu Y., Zheng Y., Shi Y., Li Z., Liu Q., Chen Y., Zhao J., Qu N.,
Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X., Vinar T., Wang Y.,
Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y., Wang X.,
Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L.,
Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H.,
Wang J., Wang J.;
"The sequence and de novo assembly of the giant panda genome.";
Nature 463:311-317(2010).
[2] {ECO:0000313|Ensembl:ENSAMEP00000013463}
IDENTIFICATION.
Ensembl;
Submitted (SEP-2011) to UniProtKB.
-!- CATALYTIC ACTIVITY: S-adenosyl-L-methionine + L-lysine-[histone] =
S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone].
{ECO:0000256|SAAS:SAAS00591578}.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00574581}.
-!- CAUTION: The sequence shown here is derived from an Ensembl
automatic analysis pipeline and should be considered as
preliminary data. {ECO:0000313|Ensembl:ENSAMEP00000013463}.
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EMBL; ACTA01048577; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; ACTA01056577; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; ACTA01064577; -; NOT_ANNOTATED_CDS; Genomic_DNA.
STRING; 9646.ENSAMEP00000013463; -.
Ensembl; ENSAMET00000014023; ENSAMEP00000013463; ENSAMEG00000012781.
eggNOG; KOG4442; Eukaryota.
eggNOG; COG2940; LUCA.
GeneTree; ENSGT00780000121845; -.
InParanoid; G1M2A2; -.
OMA; FIGHDSH; -.
OrthoDB; EOG091G040P; -.
TreeFam; TF106477; -.
Proteomes; UP000008912; Unassembled WGS sequence.
GO; GO:0005694; C:chromosome; IEA:Ensembl.
GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO; GO:0043014; F:alpha-tubulin binding; IEA:Ensembl.
GO; GO:0046975; F:histone methyltransferase activity (H3-K36 specific); IEA:Ensembl.
GO; GO:0001525; P:angiogenesis; IEA:Ensembl.
GO; GO:0035441; P:cell migration involved in vasculogenesis; IEA:Ensembl.
GO; GO:0060977; P:coronary vasculature morphogenesis; IEA:Ensembl.
GO; GO:0051607; P:defense response to virus; IEA:Ensembl.
GO; GO:0048701; P:embryonic cranial skeleton morphogenesis; IEA:Ensembl.
GO; GO:0060669; P:embryonic placenta morphogenesis; IEA:Ensembl.
GO; GO:0035987; P:endodermal cell differentiation; IEA:Ensembl.
GO; GO:0030900; P:forebrain development; IEA:Ensembl.
GO; GO:0097676; P:histone H3-K36 dimethylation; IEA:Ensembl.
GO; GO:0097198; P:histone H3-K36 trimethylation; IEA:Ensembl.
GO; GO:0048332; P:mesoderm morphogenesis; IEA:Ensembl.
GO; GO:1902850; P:microtubule cytoskeleton organization involved in mitosis; IEA:Ensembl.
GO; GO:0006298; P:mismatch repair; IEA:Ensembl.
GO; GO:0001763; P:morphogenesis of a branching structure; IEA:Ensembl.
GO; GO:0001843; P:neural tube closure; IEA:Ensembl.
GO; GO:0034728; P:nucleosome organization; IEA:Ensembl.
GO; GO:0018026; P:peptidyl-lysine monomethylation; IEA:Ensembl.
GO; GO:0060039; P:pericardium development; IEA:Ensembl.
GO; GO:0032727; P:positive regulation of interferon-alpha production; IEA:Ensembl.
GO; GO:0032465; P:regulation of cytokinesis; IEA:Ensembl.
GO; GO:0010569; P:regulation of double-strand break repair via homologous recombination; IEA:Ensembl.
GO; GO:0010793; P:regulation of mRNA export from nucleus; IEA:Ensembl.
GO; GO:1905634; P:regulation of protein localization to chromatin; IEA:Ensembl.
GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
GO; GO:0034340; P:response to type I interferon; IEA:Ensembl.
GO; GO:0048864; P:stem cell development; IEA:Ensembl.
GO; GO:0006368; P:transcription elongation from RNA polymerase II promoter; IEA:Ensembl.
CDD; cd00201; WW; 1.
InterPro; IPR006560; AWS_dom.
InterPro; IPR003616; Post-SET_dom.
InterPro; IPR001214; SET_dom.
InterPro; IPR013257; SRI.
InterPro; IPR001202; WW_dom.
InterPro; IPR036020; WW_dom_sf.
Pfam; PF00856; SET; 1.
Pfam; PF08236; SRI; 1.
Pfam; PF00397; WW; 1.
SMART; SM00570; AWS; 1.
SMART; SM00508; PostSET; 1.
SMART; SM00317; SET; 1.
SMART; SM00456; WW; 1.
SUPFAM; SSF51045; SSF51045; 1.
PROSITE; PS51215; AWS; 1.
PROSITE; PS50868; POST_SET; 1.
PROSITE; PS50280; SET; 1.
PROSITE; PS01159; WW_DOMAIN_1; 1.
PROSITE; PS50020; WW_DOMAIN_2; 1.
4: Predicted;
Complete proteome {ECO:0000313|Proteomes:UP000008912};
Methyltransferase {ECO:0000256|SAAS:SAAS00590675};
Nucleus {ECO:0000256|SAAS:SAAS00574642};
Reference proteome {ECO:0000313|Proteomes:UP000008912};
S-adenosyl-L-methionine {ECO:0000256|SAAS:SAAS00591079};
Transferase {ECO:0000256|SAAS:SAAS00590675}.
DOMAIN 1470 1524 AWS. {ECO:0000259|PROSITE:PS51215}.
DOMAIN 1526 1643 SET. {ECO:0000259|PROSITE:PS50280}.
DOMAIN 1650 1666 Post-SET. {ECO:0000259|PROSITE:PS50868}.
DOMAIN 2365 2398 WW. {ECO:0000259|PROSITE:PS50020}.
SEQUENCE 2540 AA; 284633 MW; AAF8D1E018A4C083 CRC64;
EEENEAKIEN VQKTGFIKGP MFKGVASSRF LPKGTKTKVN LEEQGRQKVS FSFSLTKKTL
QNRFLTALGN EKQNDTPNSP AGPLQVDLTP KIKMDMGDTL STTEESSPPK SRVELGKIHF
KKHLLHVTSR PLLTTATAVA SPPPPIVPLP AVIAESTTVD SPPSSPPPPP PPPQATAPSP
PAPVTEPVAL PHMPIPVLMT APVDVAVRAL KEPPVTTVPE SSEVDTKQDA AVSNSSEEHI
TQNLNEQVDT PSQKEDSHIG KEEEIPDSSK SNLGSKKTGS KKKSSQSEGT FLASESDEDS
VRTSSSQRSH DLKFSANIEK ERDSKKSLAP LKNEDVGKSS RSKTERDDKY FSYSKLERDT
RYISSRCRSE RERRRSRSRS RSDRGSRTSL SYSRSERSHY YDSDRRYHRS SPYRERARYS
RPYTDNRARE SSDSEEEYKK TYSRRTSSHS FSYRDLRTSS SYSKSDRDCK TESSYLEMEK
RGKYSSKLER ESKRTSENEG MKRCCSPPNE LGFRRGSSYS KHDSSASRYK SALSKSISKS
DKFKNSFCCT ELNEEIKTSH SFNLQAPCSK GSELRMISKI PEREKTGSPS PSNRLNDSPT
FKKLDESLIF KSEFIGHDSH DSIKELDSLS KVKNDQLRSY CPIELNINGS PGAESDLATF
CTSKTDTVLM SSDDSVTGSE VSPLVKACML PSNGFQNINR CKEKDSDDTC MLHSKSGSPF
REAEPPVSPH QDKLMSLPVM KIDYSKTIVK EPVDMTVSCC KTKDSDIYCT SNDNSPSLHH
SEAEKIEPSA TQISPNSFMN VHLKSKTVTY DNRNLTDQRS KFACEEYKQS VGSTSSASVN
HFDDLYQPIE SSGIASSLPS LPPGIKVDSL TLLQCGENTS PVLDAVLKSK STEFLKHAEK
ETVEVGSGLP DSGKGFASWE NRHNNGLSGK CVQEAQEEGN SILPDRRGRA EISLDEEGGR
EHAHTSDDSE VVFSSCDLNL TMEDSDGVTY TLKCDSSGHA SEIVSTVHED YSGSSESSSD
ESDSEDTDSD DSSIPRNRLQ SVVVVPKNST LPMEETSPCS SRSSQSYRHY SDHWEDERLE
SRRHSYEEKF ESVASKPYSQ TEKFFHHKGT EKNLEISFTQ PSRKQIDNHL SETAHPQSDG
VDSTSHTDVK SDFLGHPNSE ETAKTKIASR QQEELPVYSS DDFEDVPSKS RQQITFPNRP
DSRLGKTELS FSPSCEISRV DGFRSSEELR SLGWEFSQQE KPTTTYQQPD SSYGACGGHK
YQQSAEHYGG TRNYWQGNGY WDPRSAGRPP GTGVVYDRIQ GQVPDSLTDD REEEEIWDQR
GGSHFSSQSN KFFLSLQKDK GSVQAPEISS NSIKDTLAVN EKKDLPKNLE KNDMKDRGPP
KKRRQELESD SESDGELQDR KKVRVAVEPG EIAVPPGSAL VGPSCVMEDF RDPQRWKEYA
KQGKMPCYFD LIEENVYLTE RKKNKSHRDI KRMQCECTPL SKDERAQGEI ACGEDCLNRL
LMIECSSRCP NGDYCSNRRF QRKQHADVEV ILTEKKGWGL RAAKDLPSNT FVLEYCGEVL
DHKEFKARVK EYARNKNIHY YFMALKNDEI IDATQKGNCS RFMNHSCEPN CETQKWTVNG
QLRVGFFTTK LVPSGSELTF DYQFQRYGKE AQKCFCGSAN CRGYLGGENR VSIRAAGGKM
KKERSRKKDT VDGELEALME NGEGLSDKNQ VLSLSRLMVR IETLEQKLTC LELIQNTHSQ
SCLKSFLERH GLSLLWIWMA ELGDGRESNQ KLQEEIIKTL EHLPIPTKNM LEESKVLPII
QRWSQTKTAI PQLSEGDGYS SENTSRAHTP LNTPDPSTKL SIEADTDTPK KLMFRRLKII
SENSMDSAIS DATSELEGKD GKEDLDQLEN VPVEEEEELQ SQQLLPQQLP ESKVESEITV
EASKLPTSEP EADTEIEPKE GNGTKLEETI AEETPSQDEE EGVSDVESER SQEQPDKTVD
ISDLATKLLD SWKDLKEVYR IPKKSQTEKE NTITERGRDA VGFRDQTAAP KTPNRSRERD
PDKQTQNKEK RKRRGSLSPP SSAYERGTKR PDDRYDTPTS KKKVRIKDRN KLSTEERRKL
FEQEVAQREA QKQQQQLQTL GMTSPLPYDS LGYSAPHHPF AGYPPGYPMQ AYVDPSNPNA
GKVLLPTPNM DPVCSPAPYD HSQPLVGHST EPLAAPPPVP VVPHVAAPVE VSSSQYVAQS
DGVVHQDSSV TVLPVPAPGP VQGQNYGVWD SNQQSVSVQQ QYSPAQSQAT IYYQGQTCPT
VYGVTSPYSQ TTPPIVQSYA QPSLQYIQGQ QIFTAHPQGV VVQPAAAVTT IVAPGQPQPL
QPPEMVVTNN LLDLPPPSPP KPKTIVLPPN WKTARDPEGK IYYYHVITRQ TQWDPPTWES
PGDDASLEHE AEMDLGTPTY DENPMKTSKK PKTAEADTSS ELAKKSKEVF RKEMSQFIVQ
CLNPYRKPDC KVGRITTTED FKHLARKLTH GVMNKELKYC KNPEDLECNE NVKHKTKEYI
KKYMQKFGAV YKPKEDTELE


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