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SET domain containing 2

 H0VBU8_CAVPO            Unreviewed;      2565 AA.
H0VBU8;
22-FEB-2012, integrated into UniProtKB/TrEMBL.
22-NOV-2017, sequence version 2.
22-NOV-2017, entry version 44.
SubName: Full=SET domain containing 2 {ECO:0000313|Ensembl:ENSCPOP00000007389};
Name=SETD2 {ECO:0000313|Ensembl:ENSCPOP00000007389};
Cavia porcellus (Guinea pig).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia;
Hystricomorpha; Caviidae; Cavia.
NCBI_TaxID=10141 {ECO:0000313|Ensembl:ENSCPOP00000007389};
[1] {ECO:0000313|Ensembl:ENSCPOP00000007389}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=2N {ECO:0000313|Ensembl:ENSCPOP00000007389};
PubMed=21993624; DOI=10.1038/nature10530;
Lindblad-Toh K., Garber M., Zuk O., Lin M.F., Parker B.J.,
Washietl S., Kheradpour P., Ernst J., Jordan G., Mauceli E.,
Ward L.D., Lowe C.B., Holloway A.K., Clamp M., Gnerre S., Alfoldi J.,
Beal K., Chang J., Clawson H., Cuff J., Di Palma F., Fitzgerald S.,
Flicek P., Guttman M., Hubisz M.J., Jaffe D.B., Jungreis I.,
Kent W.J., Kostka D., Lara M., Martins A.L., Massingham T., Moltke I.,
Raney B.J., Rasmussen M.D., Robinson J., Stark A., Vilella A.J.,
Wen J., Xie X., Zody M.C., Baldwin J., Bloom T., Chin C.W., Heiman D.,
Nicol R., Nusbaum C., Young S., Wilkinson J., Worley K.C., Kovar C.L.,
Muzny D.M., Gibbs R.A., Cree A., Dihn H.H., Fowler G., Jhangiani S.,
Joshi V., Lee S., Lewis L.R., Nazareth L.V., Okwuonu G.,
Santibanez J., Warren W.C., Mardis E.R., Weinstock G.M., Wilson R.K.,
Delehaunty K., Dooling D., Fronik C., Fulton L., Fulton B., Graves T.,
Minx P., Sodergren E., Birney E., Margulies E.H., Herrero J.,
Green E.D., Haussler D., Siepel A., Goldman N., Pollard K.S.,
Pedersen J.S., Lander E.S., Kellis M.;
"A high-resolution map of human evolutionary constraint using 29
mammals.";
Nature 478:476-482(2011).
[2] {ECO:0000313|Ensembl:ENSCPOP00000007389}
IDENTIFICATION.
STRAIN=2N {ECO:0000313|Ensembl:ENSCPOP00000007389};
Ensembl;
Submitted (JAN-2012) to UniProtKB.
-!- CATALYTIC ACTIVITY: S-adenosyl-L-methionine + L-lysine-[histone] =
S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone].
{ECO:0000256|SAAS:SAAS00591578}.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00574581}.
-!- CAUTION: The sequence shown here is derived from an Ensembl
automatic analysis pipeline and should be considered as
preliminary data. {ECO:0000313|Ensembl:ENSCPOP00000007389}.
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EMBL; AAKN02012274; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AAKN02012275; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AAKN02012276; -; NOT_ANNOTATED_CDS; Genomic_DNA.
STRING; 10141.ENSCPOP00000007389; -.
Ensembl; ENSCPOT00000008290; ENSCPOP00000007389; ENSCPOG00000008215.
eggNOG; KOG4442; Eukaryota.
eggNOG; COG2940; LUCA.
GeneTree; ENSGT00780000121845; -.
InParanoid; H0VBU8; -.
OMA; FIGHDSH; -.
OrthoDB; EOG091G040P; -.
TreeFam; TF106477; -.
Proteomes; UP000005447; Unassembled WGS sequence.
Bgee; ENSCPOG00000008215; -.
GO; GO:0005694; C:chromosome; IEA:Ensembl.
GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO; GO:0043014; F:alpha-tubulin binding; IEA:Ensembl.
GO; GO:0046975; F:histone methyltransferase activity (H3-K36 specific); IEA:Ensembl.
GO; GO:0001525; P:angiogenesis; IEA:Ensembl.
GO; GO:0035441; P:cell migration involved in vasculogenesis; IEA:Ensembl.
GO; GO:0060977; P:coronary vasculature morphogenesis; IEA:Ensembl.
GO; GO:0051607; P:defense response to virus; IEA:Ensembl.
GO; GO:0048701; P:embryonic cranial skeleton morphogenesis; IEA:Ensembl.
GO; GO:0060669; P:embryonic placenta morphogenesis; IEA:Ensembl.
GO; GO:0035987; P:endodermal cell differentiation; IEA:Ensembl.
GO; GO:0030900; P:forebrain development; IEA:Ensembl.
GO; GO:0097676; P:histone H3-K36 dimethylation; IEA:Ensembl.
GO; GO:0097198; P:histone H3-K36 trimethylation; IEA:Ensembl.
GO; GO:0048332; P:mesoderm morphogenesis; IEA:Ensembl.
GO; GO:1902850; P:microtubule cytoskeleton organization involved in mitosis; IEA:Ensembl.
GO; GO:0006298; P:mismatch repair; IEA:Ensembl.
GO; GO:0001763; P:morphogenesis of a branching structure; IEA:Ensembl.
GO; GO:0001843; P:neural tube closure; IEA:Ensembl.
GO; GO:0034728; P:nucleosome organization; IEA:Ensembl.
GO; GO:0018026; P:peptidyl-lysine monomethylation; IEA:Ensembl.
GO; GO:0060039; P:pericardium development; IEA:Ensembl.
GO; GO:0032727; P:positive regulation of interferon-alpha production; IEA:Ensembl.
GO; GO:0032465; P:regulation of cytokinesis; IEA:Ensembl.
GO; GO:0010569; P:regulation of double-strand break repair via homologous recombination; IEA:Ensembl.
GO; GO:0010793; P:regulation of mRNA export from nucleus; IEA:Ensembl.
GO; GO:1905634; P:regulation of protein localization to chromatin; IEA:Ensembl.
GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
GO; GO:0034340; P:response to type I interferon; IEA:Ensembl.
GO; GO:0048864; P:stem cell development; IEA:Ensembl.
GO; GO:0006368; P:transcription elongation from RNA polymerase II promoter; IEA:Ensembl.
CDD; cd00201; WW; 1.
InterPro; IPR006560; AWS_dom.
InterPro; IPR003616; Post-SET_dom.
InterPro; IPR001214; SET_dom.
InterPro; IPR013257; SRI.
InterPro; IPR001202; WW_dom.
InterPro; IPR036020; WW_dom_sf.
Pfam; PF00856; SET; 1.
Pfam; PF08236; SRI; 1.
Pfam; PF00397; WW; 1.
SMART; SM00570; AWS; 1.
SMART; SM00508; PostSET; 1.
SMART; SM00317; SET; 1.
SMART; SM00456; WW; 1.
SUPFAM; SSF51045; SSF51045; 1.
PROSITE; PS51215; AWS; 1.
PROSITE; PS50868; POST_SET; 1.
PROSITE; PS50280; SET; 1.
PROSITE; PS01159; WW_DOMAIN_1; 1.
PROSITE; PS50020; WW_DOMAIN_2; 1.
4: Predicted;
Complete proteome {ECO:0000313|Proteomes:UP000005447};
Methyltransferase {ECO:0000256|SAAS:SAAS00590675};
Nucleus {ECO:0000256|SAAS:SAAS00574642};
Reference proteome {ECO:0000313|Proteomes:UP000005447};
S-adenosyl-L-methionine {ECO:0000256|SAAS:SAAS00591079};
Transferase {ECO:0000256|SAAS:SAAS00590675}.
SEQUENCE 2565 AA; 288165 MW; F759C517298DD79D CRC64;
MKQLPPQQPP LKMGDFYDPE HPTPEEEENE AKIESVQKTS FIKGPMFKGV ASSRFLPKGT
KTKVNLEEQG RQKVSFSFSL TKKTLPNRFL SVLGNEKQND TPNSPALSQV DSTPKIKVDV
GDTLATIEES SPPKSRVELG KIHFKKHLLH VTSRPLLSTT SAVASPSPPT VQIPAVIAES
TTVDSPPSSP PPPPPPPPPP PQATAPSSPA PVTEPVSSPH IPVTALTTAP VSLPVDVAVR
TLKEPPVTLV QESLEADTKQ DIISNSSEEH IIQNLNDQAD IPSQKEDSHI GKEELPDSSK
ISLSSKKSGS RKKYSQFEGT FLGSESDEDS VRTSSSQRSH DLKISASTEK ERDIKKSSAP
LKSEDLGKSS RSKTERDDKY FSYSKLERDT RYVSSRCRSE RERRRSRSRS RSDRGSRASL
SYSRSERSHY YDSDRRYHRS SPYRERTRYS RPYTDNRGRE SSDSEDEYKK TYSRRTSSHS
SSYRDLRTSS YSKSDRDCKA ETSYLEIERR GKYSSKLERD SKRTSENEAI KRCCSPPSDL
GFRWGSSYSK HDYSVSRYKP ALSKSMSKSD KFKNSFCCTE LNEESKQSHS FSLQTPCSKG
SELRTVSKIP EREKTRSPSP SNQLNDSPTF KKLDESPIFK SEFIGHDSHD SIKELDSKVK
NDKLRNFCPI ELNINGSPGA ESDMTFCTSK TDTVLMTSDD SVTGSEVSPL VKVCMSSSNG
FQNISRCKEK DLEDTCMQHN KSQSPFKEAE PLVLTRNNSI TSLPVTTTDY SKTVVKEQVD
KRVSGCKTKD SDRYCTANES NSSLCYSEAE NTELSVKKIS SNSFMNVHLE SKTVVCDKRN
LTDQHSKFTC GGYRQSVGGT NSASVNHLDD LYEPIGSSDI ASSLQSLPAG IKVDNLTLLQ
CGENTSLGLD GALKSKKSTE VLKNARKEKI LDVDSGFPES GKAFASWENR PNNALSGKCL
QEAQEEGDSI LHDRRGRPEI SLDEEERRGH AHTSDDSEVV LSSCDLNLTM EDSDGITYTL
KCDSSGHAPE IVSTVHEDYS SSSESSSDES DSEDTDSDDS SIPRNRLQSV VVVPKNSTLP
MEETSPCSSR SSQSYKHYSD HWEDERLESR RYSYEEKCEN IANKGCLHAE KFFHKGTEKN
LEISFMQPSR KQVDNHLPEI TYSQNDGVDS TSHSDVKSDH LGHSSTEEII KAKTFSRQQE
ELPVYSDDFE DTPSKSRQQT TFPNRPDSRH GKTELNFSSC DISHIDGLHS SEEHRNLGWD
FSQQEKPTTT YQQPDSSYGA CGTHKYQQNA EQYGGHCNYW QGNGYWDPRS AGRPPGSGVT
YDRIQGQVPD SLTDDREEEE NWDQQGESYF VSQSNKFLLS FQKDKESVQA PEISSNSVRD
SVAVNERKDF SKNLEKSDIK DRGPPKKRRQ ELESDSESDG DLQDRKKVRV DVEQGETSVV
PGSELIGPSC VMDDFRDPQR WKEYAKQGKM PCYFDLIEEN VYLTERKKNK SHRDIKRMQC
ECTPLSKDER AQGEVACGED CLNRLLMIEC SSRCPNGDYC SNRRFQRKQH ADVEVILTEK
KGWGLRAAKD LPSNTFVLEY CGEVLDHKEF KARVKEYARN KNIHYYFMAL KNDEIIDATQ
KGNCSRFMNH SCEPNCETQK WTVNGQLRVG FFTTKLVPSG SELTFDYQFQ RYGKEAQKCF
CGSANCRGYL GGENRVSIRA AGGKMKKERS RKKDSVDGEL EALMENGEGL SDKNQVLSLS
RLMVRIETLE QKLTCLKLIQ NTHSQSCLKS FLERHGLSLL WIWMAELGDG RESNQKLQEE
IIKTLEHLPI PTKNMLEESK VLPIIQRWSQ TKTAVPQLSE GDGYSSENTS RAHTPLNTPD
PSTKLSTDTD ADTPKKLMFR RLKIISENSM DSAISDATSE LEGKDGKEDL DQLENVTVEE
EEEIQSQQPF SEQLPEPKVE SETTVEASKL PTLEPEGDAE IEPKDSISTK LEEPIAEETP
SQDEEEGVSD VESERSQEQP DKTVDISDLA TKLLDSWKDL KEVYRIPKKS QTEKESTATE
RGRDAVGLRD QTTAPKTPNR SRERDPDKQT QNKEKRKRRG SLSPPSSAYE RGTKRPDDRY
DTPTSKKKVR IKDRNKLSTE ERRKLFEQEV AQREAQKQQQ QMQNLGMTSP LPYDSLGYNA
PHHPFAGYPP GYPMQAYVDP SNPNAGKVLL PTPSMDPVCS PAPYDHAQPL VGHSTEPLAA
PPPVPVVPHV AAPVEVSSSQ YVAQSDGVVH QDSSVAVMPV PTPGPVQGQN YSVWDSNQQS
VSVQQQYSPA QSQTTIYYQG QTCPSVYGVT SPYSQTTPPI VQSYAQPSLQ YIQGQQIFAA
HPQGVVVQPT AAVTTIVTPG QPQPLQPPEM VVTNNLLDLP PPSPPKPKTI VLPPNWKTAR
DPEGKIYYYH VITRQTQWDP PTWESPGDDA SLEHEAEMDL GTPTYDENPM KTSKKPKTAE
ADTSSELAKK SKEVFRKEMS QFIVQCLNPY RKPDCKVGRI TTTEDFKHLA RKLTHGVMNK
ELKYCKNPED LECNENVKHK TKEYIKKYMQ KFGAVYKPKE DTELE


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