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Serine/threonine-protein kinase-like protein At5g23170 (EC 2.7.11.1)

 STPKL_ARATH             Reviewed;         341 AA.
Q9FMY3; Q50IB8; Q50IC8; Q50ID4; Q50IE0; Q50IE8; Q50IF7; Q50IG2;
Q50IG5;
09-JAN-2007, integrated into UniProtKB/Swiss-Prot.
01-MAR-2001, sequence version 1.
23-MAY-2018, entry version 112.
RecName: Full=Serine/threonine-protein kinase-like protein At5g23170;
EC=2.7.11.1;
OrderedLocusNames=At5g23170; ORFNames=MKD15.3;
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=9501997; DOI=10.1093/dnares/4.6.401;
Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N.,
Tabata S.;
"Structural analysis of Arabidopsis thaliana chromosome 5. III.
Sequence features of the regions of 1,191,918 bp covered by seventeen
physically assigned P1 clones.";
DNA Res. 4:401-414(1997).
[2]
GENOME REANNOTATION.
STRAIN=cv. Columbia;
PubMed=27862469; DOI=10.1111/tpj.13415;
Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
Town C.D.;
"Araport11: a complete reannotation of the Arabidopsis thaliana
reference genome.";
Plant J. 89:789-804(2017).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], VARIANTS, AND TISSUE SPECIFICITY.
STRAIN=cv. Aa-0, cv. Ag-0, cv. Bl-0, cv. Bla-10, cv. Cal-0, cv. Can-0,
cv. Cnt-1, cv. Columbia, cv. Cvi-0, cv. Di-0, cv. Di-1, cv. Di-G,
cv. Ema-1, cv. Ka-0, cv. Kas-1, cv. Landsberg erecta, cv. Lip-0,
cv. Ma-0, cv. Mt-0, cv. No-0, cv. Oy-0, cv. Pa-1, cv. Per-1,
cv. Petergof, cv. Pi-0, cv. Sei-0, cv. Sorbo, cv. Su-0, cv. Tac-0,
cv. Tsu-0, and cv. Yo-0;
PubMed=15875023; DOI=10.1038/nature03480;
Kroymann J., Mitchell-Olds T.;
"Epistasis and balanced polymorphism influencing complex trait
variation.";
Nature 435:95-98(2005).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
PubMed=14593172; DOI=10.1126/science.1088305;
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J.,
Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F.,
Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.,
Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J.,
Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y.,
Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P.,
Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F.,
Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M.,
Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J.,
Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T.,
Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y.,
Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis
genome.";
Science 302:842-846(2003).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
PubMed=11910074; DOI=10.1126/science.1071006;
Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M.,
Hayashizaki Y., Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T.,
Shibata K., Shinagawa A., Shinozaki K.;
"Functional annotation of a full-length Arabidopsis cDNA collection.";
Science 296:141-145(2002).
[6]
GENE FAMILY.
PubMed=19529822; DOI=10.1093/mp/ssn083;
Chae L., Sudat S., Dudoit S., Zhu T., Luan S.;
"Diverse transcriptional programs associated with environmental stress
and hormones in the Arabidopsis receptor-like kinase gene family.";
Mol. Plant 2:84-107(2009).
-!- CATALYTIC ACTIVITY: ATP + a protein = ADP + a phosphoprotein.
-!- TISSUE SPECIFICITY: Ubiquitous. Higher expression in mature
stamina and pollen. {ECO:0000269|PubMed:15875023}.
-!- MISCELLANEOUS: This gene is linked with a growth rate QTL
(quantitative trait locus).
-!- SIMILARITY: Belongs to the protein kinase superfamily. Ser/Thr
protein kinase family. {ECO:0000255|PROSITE-ProRule:PRU00159}.
-!- WEB RESOURCE: Name=PlantP kinase Classification PPC;
URL="http://plantsp.genomics.purdue.edu/family/class.html";
-----------------------------------------------------------------------
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EMBL; AB007648; BAB11172.1; -; Genomic_DNA.
EMBL; CP002688; AED93129.1; -; Genomic_DNA.
EMBL; AJ864997; CAI23745.1; -; Genomic_DNA.
EMBL; AJ864994; CAI23739.1; -; Genomic_DNA.
EMBL; AJ864992; CAI23737.1; -; Genomic_DNA.
EMBL; AJ864991; CAI23735.1; -; Genomic_DNA.
EMBL; AJ864983; CAI23717.1; -; Genomic_DNA.
EMBL; AJ864976; CAI23703.1; -; Genomic_DNA.
EMBL; AJ864969; CAI23691.1; -; Genomic_DNA.
EMBL; AJ864968; CAI23689.1; -; Genomic_DNA.
EMBL; AJ864980; CAI23711.1; -; Genomic_DNA.
EMBL; AJ864984; CAI23720.1; -; Genomic_DNA.
EMBL; AJ864973; CAI23697.1; -; Genomic_DNA.
EMBL; AJ864996; CAI23743.1; -; Genomic_DNA.
EMBL; AJ864972; CAI23695.1; -; Genomic_DNA.
EMBL; AJ864990; CAI23733.1; -; Genomic_DNA.
EMBL; AJ864971; CAI23693.1; -; Genomic_DNA.
EMBL; AJ864989; CAI23731.1; -; Genomic_DNA.
EMBL; AJ864985; CAI23723.1; -; Genomic_DNA.
EMBL; AJ864982; CAI23715.1; -; Genomic_DNA.
EMBL; AJ864981; CAI23713.1; -; Genomic_DNA.
EMBL; AJ864970; CAI23749.1; -; Genomic_DNA.
EMBL; AJ864987; CAI23727.1; -; Genomic_DNA.
EMBL; AJ864995; CAI23741.1; -; Genomic_DNA.
EMBL; AJ864979; CAI23709.1; -; Genomic_DNA.
EMBL; AJ864975; CAI23701.1; -; Genomic_DNA.
EMBL; AJ864998; CAI23747.1; -; Genomic_DNA.
EMBL; AJ864993; CAI23751.1; -; Genomic_DNA.
EMBL; AJ864988; CAI23729.1; -; Genomic_DNA.
EMBL; AJ864986; CAI23725.1; -; Genomic_DNA.
EMBL; AJ864978; CAI23707.1; -; Genomic_DNA.
EMBL; AJ864977; CAI23705.1; -; Genomic_DNA.
EMBL; AJ864974; CAI23699.1; -; Genomic_DNA.
EMBL; BT005316; AAO63380.1; -; mRNA.
EMBL; AK117152; BAC41830.1; -; mRNA.
RefSeq; NP_197708.1; NM_122223.4.
UniGene; At.31022; -.
ProteinModelPortal; Q9FMY3; -.
SMR; Q9FMY3; -.
IntAct; Q9FMY3; 1.
STRING; 3702.AT5G23170.1; -.
PaxDb; Q9FMY3; -.
PRIDE; Q9FMY3; -.
EnsemblPlants; AT5G23170.1; AT5G23170.1; AT5G23170.
GeneID; 832381; -.
Gramene; AT5G23170.1; AT5G23170.1; AT5G23170.
KEGG; ath:AT5G23170; -.
Araport; AT5G23170; -.
TAIR; locus:2166761; AT5G23170.
eggNOG; KOG1187; Eukaryota.
eggNOG; COG0515; LUCA.
InParanoid; Q9FMY3; -.
OMA; IECTEHS; -.
OrthoDB; EOG09360N5J; -.
PhylomeDB; Q9FMY3; -.
PRO; PR:Q9FMY3; -.
Proteomes; UP000006548; Chromosome 5.
ExpressionAtlas; Q9FMY3; baseline and differential.
Genevisible; Q9FMY3; AT.
GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO; GO:0004675; F:transmembrane receptor protein serine/threonine kinase activity; IBA:GO_Central.
GO; GO:0007166; P:cell surface receptor signaling pathway; IBA:GO_Central.
GO; GO:0006468; P:protein phosphorylation; IBA:GO_Central.
InterPro; IPR011009; Kinase-like_dom_sf.
InterPro; IPR000719; Prot_kinase_dom.
InterPro; IPR017441; Protein_kinase_ATP_BS.
InterPro; IPR001245; Ser-Thr/Tyr_kinase_cat_dom.
InterPro; IPR008271; Ser/Thr_kinase_AS.
Pfam; PF07714; Pkinase_Tyr; 1.
SMART; SM00220; S_TKc; 1.
SUPFAM; SSF56112; SSF56112; 1.
PROSITE; PS00107; PROTEIN_KINASE_ATP; 1.
PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
PROSITE; PS00108; PROTEIN_KINASE_ST; 1.
2: Evidence at transcript level;
ATP-binding; Coiled coil; Complete proteome; Kinase;
Nucleotide-binding; Reference proteome;
Serine/threonine-protein kinase; Transferase.
CHAIN 1 341 Serine/threonine-protein kinase-like
protein At5g23170.
/FTId=PRO_0000271405.
DOMAIN 16 298 Protein kinase. {ECO:0000255|PROSITE-
ProRule:PRU00159}.
NP_BIND 22 30 ATP. {ECO:0000255|PROSITE-
ProRule:PRU00159}.
COILED 311 332 {ECO:0000255}.
COMPBIAS 54 69 Ser-rich.
COMPBIAS 248 266 Gly-rich.
ACT_SITE 153 153 Proton acceptor. {ECO:0000255|PROSITE-
ProRule:PRU00159, ECO:0000255|PROSITE-
ProRule:PRU10027}.
BINDING 51 51 ATP. {ECO:0000255|PROSITE-
ProRule:PRU00159}.
VARIANT 40 40 V -> D (in strain: cv. Bla-10, cv. Bl-0,
cv. Can-0, cv. Cnt-1, cv. Cvi-0, cv. Di-
G, cv. Ema-1, cv. Ka-0, cv. Kas-1, cv.
Landsberg erecta, cv. Lip-0, cv. No-0,
cv. Pa-1, cv. Petergof, cv. Sei-0, cv.
Sorbo, cv. Tac-0 and cv. Tsu-0).
VARIANT 45 45 Q -> R (in strain: cv. Bla-10, cv. Bl-0,
cv. Can-0, cv. Cnt-1, cv. Cvi-0, cv. Di-
G, cv. Ema-1, cv. Ka-0, cv. Kas-1, cv.
Landsberg erecta, cv. Lip-0, cv. No-0,
cv. Pa-1, cv. Petergof, cv. Sei-0, cv.
Sorbo, cv. Tac-0 and cv. Tsu-0).
VARIANT 54 54 S -> SSL (in strain: cv. Per-1, cv. Su-0
and cv. Yo-0).
VARIANT 56 56 L -> LSLSPS (in strain: cv. Bla-10, cv.
Bl-0, cv. Can-0, cv. Cnt-1, cv. Cvi-0,
cv. Di-G, cv. Ema-1, cv. Ka-0, cv. Kas-1,
cv. Landsberg erecta, cv. Lip-0, cv. No-
0, cv. Pa-1, cv. Petergof, cv. Sei-0, cv.
Sorbo, cv. Tac-0 and cv. Tsu-0).
VARIANT 80 80 D -> N (in strain: cv. Bla-10, cv. Bl-0,
cv. Can-0, cv. Cnt-1, cv. Cvi-0, cv. Di-
G, cv. Ema-1, cv. Ka-0, cv. Kas-1, cv.
Landsberg erecta, cv. Lip-0, cv. No-0,
cv. Pa-1, cv. Petergof, cv. Sei-0, cv.
Sorbo, cv. Tac-0 and cv. Tsu-0).
VARIANT 104 104 V -> I (in strain: cv. Bla-10, cv. Bl-0,
cv. Can-0, cv. Cnt-1, cv. Cvi-0, cv. Di-
G, cv. Ema-1, cv. Ka-0, cv. Kas-1, cv.
Landsberg erecta, cv. Lip-0, cv. No-0,
cv. Pa-1, cv. Petergof, cv. Sei-0, cv.
Sorbo, cv. Tac-0 and cv. Tsu-0).
VARIANT 111 111 E -> G (in strain: cv. Bla-10, cv. Bl-0,
cv. Can-0, cv. Cnt-1, cv. Cvi-0, cv. Di-
G, cv. Ema-1, cv. Ka-0, cv. Kas-1, cv.
Landsberg erecta, cv. Lip-0, cv. No-0,
cv. Pa-1, cv. Petergof, cv. Sei-0, cv.
Sorbo, cv. Tac-0 and cv. Tsu-0).
VARIANT 114 114 Y -> H (in strain: cv. Bla-10, cv. Bl-0,
cv. Cal-0, cv. Can-0, cv. Cnt-1, cv. Cvi-
0, cv. Di-G, cv. Di-1, cv. Ema-1, cv. Ka-
0, cv. Kas-1, cv. Landsberg erecta, cv.
Lip-0, cv. No-0, cv. Pa-1, cv. Per-1, cv.
Petergof, cv. Sei-0, cv. Sorbo, cv. Su-0,
cv. Tac-0, cv. Tsu-0 and cv. Yo-0).
VARIANT 126 126 T -> A (in strain: cv. Di-1).
VARIANT 142 142 H -> N (in strain: cv. Bl-0, cv. Cnt-1,
cv. Ema-1, cv. Ka-0, cv. Kas-1, cv. No-0,
cv. Sei-0 and cv. Tac-0).
VARIANT 147 149 HGI -> QGV (in strain: cv. Bla-10, cv.
Bl-0, cv. Can-0, cv. Cnt-1, cv. Cvi-0,
cv. Di-G, cv. Ema-1, cv. Ka-0, cv. Kas-1,
cv. Landsberg erecta, cv. No-0, cv. Pa-1,
cv. Petergof, cv. Sei-0, cv. Sorbo, cv.
Tac-0 and cv. Tsu-0).
VARIANT 177 177 D -> E (in strain: cv. Bla-10, cv. Bl-0,
cv. Can-0, cv. Cnt-1, cv. Cvi-0, cv. Di-
G, cv. Ema-1, cv. Ka-0, cv. Kas-1, cv.
Landsberg erecta, cv. No-0, cv. Pa-1, cv.
Petergof, cv. Sei-0, cv. Sorbo, cv. Tac-0
and cv. Tsu-0).
VARIANT 237 237 I -> M (in strain: cv. Sorbo).
VARIANT 255 255 Missing (in strain: cv. Bla-10, cv. Bl-0,
cv. Cnt-1, cv. Ema-1, cv. Ka-0, cv. Kas-
1, cv. No-0, cv. Pa-1, cv. Sei-0 and cv.
Tac-0).
VARIANT 269 269 L -> Q (in strain: cv. Bla-10, cv. Bl-0,
cv. Cnt-1, cv. Ema-1, cv. Ka-0, cv. Kas-
1, cv. No-0, cv. Pa-1, cv. Sei-0 and cv.
Tac-0).
VARIANT 297 297 V -> M (in strain: cv. Can-0, cv. Cvi-0,
cv. Di-G, cv. Landsberg erecta, cv. Lip-
0, cv. Petergof, cv. Sorbo and cv. Tsu-
0).
VARIANT 301 301 A -> E (in strain: cv. Can-0, cv. Cvi-0,
cv. Di-G, cv. Landsberg erecta, cv. Lip-
0, cv. Petergof, cv. Sorbo and cv. Tsu-
0).
SEQUENCE 341 AA; 38003 MW; 7B742E0392C45258 CRC64;
MKEFDYDKLV TAIDRFSPSK LIGKGSHGYV YKALLHHQDV DETRQRVVAI KTPSSLSPSS
PSSSSSSKSE QTKKLENEID VMSSLPYHPH VLSFLGHAEK KLMVVEYMPN ESLYQLLHVS
TDPLPTWLKR IEIALQIASA VHFLHEHGII HRDIKSENIL FDSNWEAKLA DFGLAVDFGG
DKKIRPAPAG TIGYLDPCYT LPENLSMKTD VYSYGVVLLE IVSCRKAIDV SRSPASIVDW
AVPLIKEGRI GEICGGGGGG SGVFRGMSLR LLRMAARCVS SDVESRPCFG EITAEIVACL
AEPLKSLPLW MSVLRRVVKL KRRKKRLRET LTWPGQTCRV W


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