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Sodium/hydrogen exchanger 7 (Na( )/H( ) exchanger 7) (NHE-7) (Protein SALT OVERLY SENSITIVE 1)

 NHX7_ARATH              Reviewed;        1146 AA.
Q9LKW9; Q9ZPS6;
20-DEC-2005, integrated into UniProtKB/Swiss-Prot.
01-OCT-2000, sequence version 1.
28-MAR-2018, entry version 123.
RecName: Full=Sodium/hydrogen exchanger 7;
AltName: Full=Na(+)/H(+) exchanger 7;
Short=NHE-7;
AltName: Full=Protein SALT OVERLY SENSITIVE 1;
Name=NHX7; Synonyms=SOS1; OrderedLocusNames=At2g01980;
ORFNames=F14H20.5;
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, TISSUE SPECIFICITY,
INDUCTION, AND MUTAGENESIS OF GLY-136; ARG-365; GLY-777 AND GLY-784.
PubMed=10823923; DOI=10.1073/pnas.120170197;
Shi H., Ishitani M., Kim C., Zhu J.-K.;
"The Arabidopsis thaliana salt tolerance gene SOS1 encodes a putative
Na(+)/H(+) antiporter.";
Proc. Natl. Acad. Sci. U.S.A. 97:6896-6901(2000).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=10617197; DOI=10.1038/45471;
Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L.,
Moffat K.S., Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L.,
Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H.,
Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D.,
Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M.,
Venter J.C.;
"Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana.";
Nature 402:761-768(1999).
[3]
GENOME REANNOTATION.
STRAIN=cv. Columbia;
The Arabidopsis Information Portal (Araport);
Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
PubMed=14593172; DOI=10.1126/science.1088305;
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J.,
Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F.,
Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.,
Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J.,
Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y.,
Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P.,
Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F.,
Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M.,
Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J.,
Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T.,
Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y.,
Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis
genome.";
Science 302:842-846(2003).
[5]
FUNCTION, AND MUTAGENESIS OF ARG-365.
PubMed=12239394; DOI=10.1105/tpc.8.4.617;
Wu S.-J., Ding L., Zhu J.-K.;
"SOS1, a genetic locus essential for salt tolerance and potassium
acquisition.";
Plant Cell 8:617-627(1996).
[6]
FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY, AND INDUCTION.
PubMed=11884687; DOI=10.1105/tpc.010371;
Shi H., Quintero F.J., Pardo J.M., Zhu J.-K.;
"The putative plasma membrane Na(+)/H(+) antiporter SOS1 controls
long-distance Na(+) transport in plants.";
Plant Cell 14:465-477(2002).
[7]
FUNCTION, AND REGULATION.
PubMed=12034882; DOI=10.1073/pnas.122224699;
Qiu Q.-S., Guo Y., Dietrich M.A., Schumaker K.S., Zhu J.-K.;
"Regulation of SOS1, a plasma membrane Na(+)/H(+) exchanger in
Arabidopsis thaliana, by SOS2 and SOS3.";
Proc. Natl. Acad. Sci. U.S.A. 99:8436-8441(2002).
[8]
PHOSPHORYLATION, INTERACTION WITH CIPK24/SOS2 AND CBL4/SOS3, AND
REGULATION.
PubMed=12070350; DOI=10.1073/pnas.132092099;
Quintero F.J., Ohta M., Shi H., Zhu J.-K., Pardo J.M.;
"Reconstitution in yeast of the Arabidopsis SOS signaling pathway for
Na(+) homeostasis.";
Proc. Natl. Acad. Sci. U.S.A. 99:9061-9066(2002).
[9]
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
STRAIN=cv. La-0;
PubMed=14506206; DOI=10.1074/mcp.T300006-MCP200;
Nuehse T.S., Stensballe A., Jensen O.N., Peck S.C.;
"Large-scale analysis of in vivo phosphorylated membrane proteins by
immobilized metal ion affinity chromatography and mass spectrometry.";
Mol. Cell. Proteomics 2:1234-1243(2003).
[10]
FUNCTION.
PubMed=12469134; DOI=10.1038/nbt766;
Shi H., Lee B.-H., Wu S.-J., Zhu J.-K.;
"Overexpression of a plasma membrane Na(+)/H(+) antiporter gene
improves salt tolerance in Arabidopsis thaliana.";
Nat. Biotechnol. 21:81-85(2003).
[11]
FUNCTION, SUBCELLULAR LOCATION, AND BIOPHYSICOCHEMICAL PROPERTIES.
PubMed=12805632; DOI=10.1104/pp.102.010421;
Qiu Q.-S., Barkla B.J., Vera-Estrella R., Zhu J.-K., Schumaker K.S.;
"Na(+)/H(+) exchange activity in the plasma membrane of Arabidopsis.";
Plant Physiol. 132:1041-1052(2003).
[12]
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
PubMed=15308754; DOI=10.1105/tpc.104.023150;
Nuehse T.S., Stensballe A., Jensen O.N., Peck S.C.;
"Phosphoproteomics of the Arabidopsis plasma membrane and a new
phosphorylation site database.";
Plant Cell 16:2394-2405(2004).
[13]
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
PubMed=17869214; DOI=10.1016/j.bbrc.2007.08.177;
Hem S., Rofidal V., Sommerer N., Rossignol M.;
"Novel subsets of the Arabidopsis plasmalemma phosphoproteome identify
phosphorylation sites in secondary active transporters.";
Biochem. Biophys. Res. Commun. 363:375-380(2007).
-!- FUNCTION: Acts in electroneutral exchange of protons for cations
such as Na(+) or Li(+) across plasma membrane. Involved in Na(+)
and K(+) homeostasis. Required for cytoplasmic Na(+) and Li(+)
detoxification by secreting them from the cytoplasm to the
extracellular space. Regulates Na(+) content of the xylem sap.
{ECO:0000269|PubMed:10823923, ECO:0000269|PubMed:11884687,
ECO:0000269|PubMed:12034882, ECO:0000269|PubMed:12239394,
ECO:0000269|PubMed:12469134, ECO:0000269|PubMed:12805632}.
-!- BIOPHYSICOCHEMICAL PROPERTIES:
Kinetic parameters:
KM=22.8 mM for Na(+) {ECO:0000269|PubMed:12805632};
-!- SUBUNIT: Interacts with CIPK24/SOS2 and CBL4/SOS3.
{ECO:0000269|PubMed:12070350}.
-!- INTERACTION:
Q9LDI3:CIPK24; NbExp=4; IntAct=EBI-2368285, EBI-537551;
Q8RY59:RCD1; NbExp=5; IntAct=EBI-2368285, EBI-2118043;
-!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:11884687,
ECO:0000269|PubMed:12805632}; Multi-pass membrane protein
{ECO:0000269|PubMed:11884687, ECO:0000269|PubMed:12805632}.
-!- TISSUE SPECIFICITY: More expressed in roots than in shoots. Mostly
localized in parenchyma cells at the xylem/symplast boundary in
roots, hypocotyls, stems and leaves. Also present in root tips
epidermal cells. {ECO:0000269|PubMed:10823923,
ECO:0000269|PubMed:11884687}.
-!- INDUCTION: By Na(+), in a SOS signaling pathway-dependent manner.
{ECO:0000269|PubMed:10823923, ECO:0000269|PubMed:11884687}.
-!- PTM: Phosphorylated by CIPK24/SOS2 in complex with CBL4/SOS3.
{ECO:0000269|PubMed:12070350}.
-!- MISCELLANEOUS: Positively regulated by the salt overly sensitive
(SOS) signaling pathway that involves the kinase CIPK24/SOS2 and
the calcium sensor CBL4/SOS3.
-!- MISCELLANEOUS: Transgenic plants that overexpress NHX7 have
enhanced capability to grow on high saline soils.
-!- SIMILARITY: Belongs to the monovalent cation:proton antiporter 1
(CPA1) transporter (TC 2.A.36) family. {ECO:0000305}.
-!- SEQUENCE CAUTION:
Sequence=AAD20091.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
-----------------------------------------------------------------------
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-----------------------------------------------------------------------
EMBL; AF256224; AAF76139.1; -; Genomic_DNA.
EMBL; AC006532; AAD20091.1; ALT_SEQ; Genomic_DNA.
EMBL; CP002685; AEC05529.1; -; Genomic_DNA.
EMBL; AY062746; AAL32824.1; -; mRNA.
PIR; E84431; E84431.
RefSeq; NP_178307.2; NM_126259.4.
UniGene; At.27246; -.
ProteinModelPortal; Q9LKW9; -.
SMR; Q9LKW9; -.
BioGrid; 132; 3.
DIP; DIP-52883N; -.
IntAct; Q9LKW9; 2.
STRING; 3702.AT2G01980.1; -.
TCDB; 2.A.36.7.6; the monovalent cation:proton antiporter-1 (cpa1) family.
iPTMnet; Q9LKW9; -.
PaxDb; Q9LKW9; -.
EnsemblPlants; AT2G01980.1; AT2G01980.1; AT2G01980.
GeneID; 814729; -.
Gramene; AT2G01980.1; AT2G01980.1; AT2G01980.
KEGG; ath:AT2G01980; -.
Araport; AT2G01980; -.
TAIR; locus:2041100; AT2G01980.
eggNOG; KOG1965; Eukaryota.
eggNOG; COG0025; LUCA.
HOGENOM; HOG000029489; -.
InParanoid; Q9LKW9; -.
OMA; MINDMKS; -.
OrthoDB; EOG0936011Z; -.
PhylomeDB; Q9LKW9; -.
PRO; PR:Q9LKW9; -.
Proteomes; UP000006548; Chromosome 2.
ExpressionAtlas; Q9LKW9; baseline and differential.
Genevisible; Q9LKW9; AT.
GO; GO:0009941; C:chloroplast envelope; IDA:TAIR.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005886; C:plasma membrane; IDA:TAIR.
GO; GO:0015386; F:potassium:proton antiporter activity; IBA:GO_Central.
GO; GO:0015385; F:sodium:proton antiporter activity; IBA:GO_Central.
GO; GO:0071805; P:potassium ion transmembrane transport; IMP:TAIR.
GO; GO:0051453; P:regulation of intracellular pH; IBA:GO_Central.
GO; GO:2000377; P:regulation of reactive oxygen species metabolic process; IMP:TAIR.
GO; GO:0042542; P:response to hydrogen peroxide; IMP:TAIR.
GO; GO:0006979; P:response to oxidative stress; IMP:TAIR.
GO; GO:0000302; P:response to reactive oxygen species; IEP:TAIR.
GO; GO:0009651; P:response to salt stress; IMP:TAIR.
GO; GO:0098719; P:sodium ion import across plasma membrane; IBA:GO_Central.
GO; GO:0006814; P:sodium ion transport; IMP:TAIR.
InterPro; IPR006153; Cation/H_exchanger.
InterPro; IPR018422; Cation/H_exchanger_CPA1.
InterPro; IPR018490; cNMP-bd-like.
PANTHER; PTHR10110; PTHR10110; 1.
Pfam; PF00999; Na_H_Exchanger; 1.
SUPFAM; SSF51206; SSF51206; 1.
1: Evidence at protein level;
Antiport; Cell membrane; Complete proteome; Ion transport; Membrane;
Phosphoprotein; Reference proteome; Sodium; Sodium transport;
Transmembrane; Transmembrane helix; Transport.
CHAIN 1 1146 Sodium/hydrogen exchanger 7.
/FTId=PRO_0000052378.
TOPO_DOM 1 28 Extracellular. {ECO:0000255}.
TRANSMEM 29 49 Helical. {ECO:0000255}.
TOPO_DOM 50 58 Cytoplasmic. {ECO:0000255}.
TRANSMEM 59 79 Helical. {ECO:0000255}.
TOPO_DOM 80 99 Extracellular. {ECO:0000255}.
TRANSMEM 100 120 Helical. {ECO:0000255}.
TOPO_DOM 121 127 Cytoplasmic. {ECO:0000255}.
TRANSMEM 128 148 Helical. {ECO:0000255}.
TOPO_DOM 149 159 Extracellular. {ECO:0000255}.
TRANSMEM 160 180 Helical. {ECO:0000255}.
TOPO_DOM 181 191 Cytoplasmic. {ECO:0000255}.
TRANSMEM 192 212 Helical. {ECO:0000255}.
TOPO_DOM 213 227 Extracellular. {ECO:0000255}.
TRANSMEM 228 250 Helical. {ECO:0000255}.
TOPO_DOM 251 253 Cytoplasmic. {ECO:0000255}.
TRANSMEM 254 273 Helical. {ECO:0000255}.
TOPO_DOM 274 278 Extracellular. {ECO:0000255}.
TRANSMEM 279 299 Helical. {ECO:0000255}.
TOPO_DOM 300 313 Cytoplasmic. {ECO:0000255}.
TRANSMEM 314 334 Helical. {ECO:0000255}.
TOPO_DOM 335 352 Extracellular. {ECO:0000255}.
TRANSMEM 353 373 Helical. {ECO:0000255}.
TOPO_DOM 374 387 Cytoplasmic. {ECO:0000255}.
TRANSMEM 388 408 Helical. {ECO:0000255}.
TOPO_DOM 409 420 Extracellular. {ECO:0000255}.
TRANSMEM 421 441 Helical. {ECO:0000255}.
TOPO_DOM 442 1146 Cytoplasmic. {ECO:0000255}.
MUTAGEN 136 136 G->E: In sos1-12; hypersensitivity to
Na(+) and Li(+).
{ECO:0000269|PubMed:10823923}.
MUTAGEN 365 365 R->C: In sos1-3; hypersensitivity to
Na(+) and Li(+).
{ECO:0000269|PubMed:10823923,
ECO:0000269|PubMed:12239394}.
MUTAGEN 777 777 G->E: In sos1-8; hypersensitivity to
Na(+) and Li(+).
{ECO:0000269|PubMed:10823923}.
MUTAGEN 784 784 G->D: In sos1-9; hypersensitivity to
Na(+) and Li(+).
{ECO:0000269|PubMed:10823923}.
SEQUENCE 1146 AA; 127188 MW; DAEA315426F8AE7A CRC64;
MTTVIDATMA YRFLEEATDS SSSSSSSKLE SSPVDAVLFV GMSLVLGIAS RHLLRGTRVP
YTVALLVIGI ALGSLEYGAK HNLGKIGHGI RIWNEIDPEL LLAVFLPALL FESSFSMEVH
QIKRCLGQMV LLAVPGVLIS TACLGSLVKV TFPYEWDWKT SLLLGGLLSA TDPVAVVALL
KELGASKKLS TIIEGESLMN DGTAIVVFQL FLKMAMGQNS DWSSIIKFLL KVALGAVGIG
LAFGIASVIW LKFIFNDTVI EITLTIAVSY FAYYTAQEWA GASGVLTVMT LGMFYAAFAR
TAFKGDSQKS LHHFWEMVAY IANTLIFILS GVVIAEGILD SDKIAYQGNS WRFLFLLYVY
IQLSRVVVVG VLYPLLCRFG YGLDWKESII LVWSGLRGAV ALALSLSVKQ SSGNSHISKE
TGTLFLFFTG GIVFLTLIVN GSTTQFVLRL LRMDILPAPK KRILEYTKYE MLNKALRAFQ
DLGDDEELGP ADWPTVESYI SSLKGSEGEL VHHPHNGSKI GSLDPKSLKD IRMRFLNGVQ
ATYWEMLDEG RISEVTANIL MQSVDEALDQ VSTTLCDWRG LKPHVNFPNY YNFLHSKVVP
RKLVTYFAVE RLESACYISA AFLRAHTIAR QQLYDFLGES NIGSIVINES EKEGEEAKKF
LEKVRSSFPQ VLRVVKTKQV TYSVLNHLLG YIENLEKVGL LEEKEIAHLH DAVQTGLKKL
LRNPPIVKLP KLSDMITSHP LSVALPPAFC EPLKHSKKEP MKLRGVTLYK EGSKPTGVWL
IFDGIVKWKS KILSNNHSLH PTFSHGSTLG LYEVLTGKPY LCDLITDSMV LCFFIDSEKI
LSLQSDSTID DFLWQESALV LLKLLRPQIF ESVAMQELRA LVSTESSKLT TYVTGESIEI
DCNSIGLLLE GFVKPVGIKE ELISSPAALS PSNGNQSFHN SSEASGIMRV SFSQQATQYI
VETRARAIIF NIGAFGADRT LHRRPSSLTP PRSSSSDQLQ RSFRKEHRGL MSWPENIYAK
QQQEINKTTL SLSERAMQLS IFGSMVNVYR RSVSFGGIYN NKLQDNLLYK KLPLNPAQGL
VSAKSESSIV TKKQLETRKH ACQLPLKGES STRQNTMVES SDEEDEDEGI VVRIDSPSKI
VFRNDL


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