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Succinate dehydrogenase iron-sulfur subunit (EC 1.3.5.1)

 SDHB_RICFE              Reviewed;         261 AA.
Q4UN71;
20-MAR-2007, integrated into UniProtKB/Swiss-Prot.
05-JUL-2005, sequence version 1.
20-DEC-2017, entry version 93.
RecName: Full=Succinate dehydrogenase iron-sulfur subunit;
EC=1.3.5.1;
Name=sdhB; OrderedLocusNames=RF_0136;
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi).
Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;
Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group.
NCBI_TaxID=315456;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC VR-1525 / URRWXCal2;
PubMed=15984913; DOI=10.1371/journal.pbio.0030248;
Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E.,
Parinello H., Claverie J.-M., Raoult D.;
"The genome sequence of Rickettsia felis identifies the first putative
conjugative plasmid in an obligate intracellular parasite.";
PLoS Biol. 3:1-12(2005).
-!- CATALYTIC ACTIVITY: Succinate + a quinone = fumarate + a quinol.
-!- COFACTOR:
Name=[2Fe-2S] cluster; Xref=ChEBI:CHEBI:49601;
Note=Binds 1 [2Fe-2S] cluster.;
-!- COFACTOR:
Name=[3Fe-4S] cluster; Xref=ChEBI:CHEBI:21137;
Note=Binds 1 [3Fe-4S] cluster.;
-!- COFACTOR:
Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883;
Note=Binds 1 [4Fe-4S] cluster.;
-!- PATHWAY: Carbohydrate metabolism; tricarboxylic acid cycle;
fumarate from succinate (bacterial route): step 1/1.
-!- SUBUNIT: Part of an enzyme complex containing four subunits: a
flavoprotein, an iron-sulfur, cytochrome b-556, and a hydrophobic
anchor protein.
-!- SIMILARITY: Belongs to the succinate dehydrogenase/fumarate
reductase iron-sulfur protein family. {ECO:0000305}.
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EMBL; CP000053; AAY60987.1; -; Genomic_DNA.
RefSeq; WP_011270490.1; NC_007109.1.
ProteinModelPortal; Q4UN71; -.
SMR; Q4UN71; -.
STRING; 315456.RF_0136; -.
EnsemblBacteria; AAY60987; AAY60987; RF_0136.
KEGG; rfe:RF_0136; -.
eggNOG; ENOG4105E33; Bacteria.
eggNOG; COG0479; LUCA.
HOGENOM; HOG000160590; -.
KO; K00240; -.
OMA; DGQYFGP; -.
OrthoDB; POG091H02OF; -.
UniPathway; UPA00223; UER01005.
Proteomes; UP000008548; Chromosome.
GO; GO:0051537; F:2 iron, 2 sulfur cluster binding; IEA:UniProtKB-KW.
GO; GO:0051538; F:3 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
GO; GO:0009055; F:electron transfer activity; IEA:InterPro.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0008177; F:succinate dehydrogenase (ubiquinone) activity; IEA:UniProtKB-EC.
GO; GO:0006099; P:tricarboxylic acid cycle; IEA:UniProtKB-UniPathway.
Gene3D; 1.10.1060.10; -; 1.
Gene3D; 3.10.20.30; -; 1.
InterPro; IPR036010; 2Fe-2S_ferredoxin-like_sf.
InterPro; IPR001041; 2Fe-2S_ferredoxin-type.
InterPro; IPR006058; 2Fe2S_fd_BS.
InterPro; IPR017896; 4Fe4S_Fe-S-bd.
InterPro; IPR017900; 4Fe4S_Fe_S_CS.
InterPro; IPR012675; Beta-grasp_dom_sf.
InterPro; IPR009051; Helical_ferredxn.
InterPro; IPR004489; Succ_DH/fum_Rdtase_Fe-S.
InterPro; IPR025192; Succ_DH/fum_Rdtase_N.
Pfam; PF13085; Fer2_3; 1.
SUPFAM; SSF46548; SSF46548; 1.
SUPFAM; SSF54292; SSF54292; 1.
TIGRFAMs; TIGR00384; dhsB; 1.
PROSITE; PS00197; 2FE2S_FER_1; 1.
PROSITE; PS51085; 2FE2S_FER_2; 1.
PROSITE; PS00198; 4FE4S_FER_1; 1.
PROSITE; PS51379; 4FE4S_FER_2; 1.
3: Inferred from homology;
2Fe-2S; 3Fe-4S; 4Fe-4S; Complete proteome; Electron transport; Iron;
Iron-sulfur; Metal-binding; Oxidoreductase; Transport;
Tricarboxylic acid cycle.
CHAIN 1 261 Succinate dehydrogenase iron-sulfur
subunit.
/FTId=PRO_0000280983.
DOMAIN 28 119 2Fe-2S ferredoxin-type.
{ECO:0000255|PROSITE-ProRule:PRU00465}.
DOMAIN 161 191 4Fe-4S ferredoxin-type.
{ECO:0000255|PROSITE-ProRule:PRU00711}.
METAL 80 80 Iron-sulfur 1 (2Fe-2S). {ECO:0000250}.
METAL 85 85 Iron-sulfur 1 (2Fe-2S). {ECO:0000250}.
METAL 100 100 Iron-sulfur 1 (2Fe-2S). {ECO:0000250}.
METAL 171 171 Iron-sulfur 2 (4Fe-4S). {ECO:0000250}.
METAL 174 174 Iron-sulfur 2 (4Fe-4S). {ECO:0000250}.
METAL 177 177 Iron-sulfur 2 (4Fe-4S). {ECO:0000250}.
METAL 181 181 Iron-sulfur 3 (3Fe-4S). {ECO:0000250}.
METAL 228 228 Iron-sulfur 3 (3Fe-4S). {ECO:0000250}.
METAL 234 234 Iron-sulfur 3 (3Fe-4S). {ECO:0000250}.
METAL 238 238 Iron-sulfur 2 (4Fe-4S). {ECO:0000250}.
BINDING 186 186 Ubiquinone; shared with SdhD subunit.
{ECO:0000250}.
SEQUENCE 261 AA; 29613 MW; A3BD2326E50BF9B5 CRC64;
MAELRLPPNS VVKKGKEHKE QEEMLKPRKV KIYRYDPDLD ENPTIDSFEI DLSKTGPMVL
DALIKIKNEI DSTLTFRRSC REGICGSCSM NIDGTNTLAC IKPIEEISGD IKIYPLPHMK
VVKDLVPDMS HFYAQYESIE PWLKTDSPTP SNSERLQSIK GREKLDGLYE CILCACCSTS
CPSYWWNGDK YLGPAILLQA YRWIADSRDD HTGERLEDLE DPSKLYRCHT IMNCTKTCPK
GLNPAKAIGK IKSLIAERHG V


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