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Sugar efflux transporter

 SOTB_ECOLI              Reviewed;         396 AA.
P31122; P76883; P77353;
01-JUL-1993, integrated into UniProtKB/Swiss-Prot.
01-NOV-1997, sequence version 2.
28-MAR-2018, entry version 137.
RecName: Full=Sugar efflux transporter;
Name=sotB; Synonyms=ydeA; OrderedLocusNames=b1528, JW1521;
Escherichia coli (strain K12).
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
Enterobacteriaceae; Escherichia.
NCBI_TaxID=83333;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
PubMed=9097039; DOI=10.1093/dnares/3.6.363;
Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Itoh T.,
Kasai H., Kashimoto K., Kimura S., Kitakawa M., Kitagawa M.,
Makino K., Miki T., Mizobuchi K., Mori H., Mori T., Motomura K.,
Nakade S., Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N.,
Sampei G., Seki Y., Sivasundaram S., Tagami H., Takeda J.,
Takemoto K., Takeuchi Y., Wada C., Yamamoto Y., Horiuchi T.;
"A 570-kb DNA sequence of the Escherichia coli K-12 genome
corresponding to the 28.0-40.1 min region on the linkage map.";
DNA Res. 3:363-377(1996).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / MG1655 / ATCC 47076;
PubMed=9278503; DOI=10.1126/science.277.5331.1453;
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J.,
Mau B., Shao Y.;
"The complete genome sequence of Escherichia coli K-12.";
Science 277:1453-1462(1997).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
PubMed=16738553; DOI=10.1038/msb4100049;
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
"Highly accurate genome sequences of Escherichia coli K-12 strains
MG1655 and W3110.";
Mol. Syst. Biol. 2:E1-E5(2006).
[4]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 217-396.
PubMed=8383113; DOI=10.1128/jb.175.5.1484-1492.1993;
Cohen S.P., Haechler H., Levy S.B.;
"Genetic and functional analysis of the multiple antibiotic resistance
(mar) locus in Escherichia coli.";
J. Bacteriol. 175:1484-1492(1993).
[5]
CHARACTERIZATION.
STRAIN=SB0;
PubMed=10094697;
Bost S., Silva F., Belin D.;
"Transcriptional activation of ydeA, which encodes a member of the
major facilitator superfamily, interferes with arabinose accumulation
and induction of the Escherichia coli arabinose PBAD promoter.";
J. Bacteriol. 181:2185-2191(1999).
[6]
CHARACTERIZATION.
STRAIN=JS219;
PubMed=10438792;
Carole S., Pichoff S., Bouche J.-P.;
"Escherichia coli gene ydeA encodes a major facilitator pump which
exports L-arabinose and isopropyl-beta-D-thiogalactopyranoside.";
J. Bacteriol. 181:5123-5125(1999).
[7]
TOPOLOGY [LARGE SCALE ANALYSIS].
STRAIN=K12 / MG1655 / ATCC 47076;
PubMed=15919996; DOI=10.1126/science.1109730;
Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
"Global topology analysis of the Escherichia coli inner membrane
proteome.";
Science 308:1321-1323(2005).
-!- FUNCTION: Involved in the efflux of sugars. The physiological role
may be the reduction of the intracellular concentration of toxic
sugars or sugar metabolites. Transports L-arabinose and to a
lesser extent IPTG. Seems to contribute to the control of the
arabinose regulon.
-!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane
protein.
-!- SIMILARITY: Belongs to the major facilitator superfamily. SotB (TC
2.A.1.2) family. {ECO:0000305}.
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EMBL; U00096; AAC74601.1; -; Genomic_DNA.
EMBL; AP009048; BAA15210.1; -; Genomic_DNA.
EMBL; M96235; -; NOT_ANNOTATED_CDS; Genomic_DNA.
PIR; C64907; C64907.
RefSeq; NP_416045.1; NC_000913.3.
RefSeq; WP_000210799.1; NZ_LN832404.1.
ProteinModelPortal; P31122; -.
BioGrid; 4259471; 243.
STRING; 316385.ECDH10B_1659; -.
TCDB; 2.A.1.2.15; the major facilitator superfamily (mfs).
PaxDb; P31122; -.
PRIDE; P31122; -.
EnsemblBacteria; AAC74601; AAC74601; b1528.
EnsemblBacteria; BAA15210; BAA15210; BAA15210.
GeneID; 947218; -.
KEGG; ecj:JW1521; -.
KEGG; eco:b1528; -.
PATRIC; fig|1411691.4.peg.738; -.
EchoBASE; EB1592; -.
EcoGene; EG11636; sotB.
eggNOG; ENOG4105F27; Bacteria.
eggNOG; COG2814; LUCA.
HOGENOM; HOG000268498; -.
InParanoid; P31122; -.
KO; K08159; -.
OMA; YTYIEPF; -.
PhylomeDB; P31122; -.
BioCyc; EcoCyc:YDEA-MONOMER; -.
BioCyc; MetaCyc:YDEA-MONOMER; -.
PRO; PR:P31122; -.
Proteomes; UP000000318; Chromosome.
Proteomes; UP000000625; Chromosome.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
GO; GO:0008643; P:carbohydrate transport; IEA:UniProtKB-KW.
GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
CDD; cd06174; MFS; 1.
HAMAP; MF_00517; MFS_SotB; 1.
InterPro; IPR011701; MFS.
InterPro; IPR020846; MFS_dom.
InterPro; IPR036259; MFS_trans_sf.
InterPro; IPR023495; Sugar_effux_transptr_put.
Pfam; PF07690; MFS_1; 1.
SUPFAM; SSF103473; SSF103473; 1.
PROSITE; PS50850; MFS; 1.
1: Evidence at protein level;
Cell inner membrane; Cell membrane; Complete proteome; Membrane;
Reference proteome; Sugar transport; Transmembrane;
Transmembrane helix; Transport.
CHAIN 1 396 Sugar efflux transporter.
/FTId=PRO_0000209323.
TOPO_DOM 1 14 Cytoplasmic. {ECO:0000255}.
TRANSMEM 15 35 Helical. {ECO:0000255}.
TOPO_DOM 36 49 Periplasmic. {ECO:0000255}.
TRANSMEM 50 70 Helical. {ECO:0000255}.
TOPO_DOM 71 80 Cytoplasmic. {ECO:0000255}.
TRANSMEM 81 101 Helical. {ECO:0000255}.
TOPO_DOM 102 102 Periplasmic. {ECO:0000255}.
TRANSMEM 103 123 Helical. {ECO:0000255}.
TOPO_DOM 124 135 Cytoplasmic. {ECO:0000255}.
TRANSMEM 136 156 Helical. {ECO:0000255}.
TOPO_DOM 157 169 Periplasmic. {ECO:0000255}.
TRANSMEM 170 190 Helical. {ECO:0000255}.
TOPO_DOM 191 208 Cytoplasmic. {ECO:0000255}.
TRANSMEM 209 229 Helical. {ECO:0000255}.
TOPO_DOM 230 245 Periplasmic. {ECO:0000255}.
TRANSMEM 246 266 Helical. {ECO:0000255}.
TOPO_DOM 267 274 Cytoplasmic. {ECO:0000255}.
TRANSMEM 275 295 Helical. {ECO:0000255}.
TOPO_DOM 296 298 Periplasmic. {ECO:0000255}.
TRANSMEM 299 319 Helical. {ECO:0000255}.
TOPO_DOM 320 332 Cytoplasmic. {ECO:0000255}.
TRANSMEM 333 353 Helical. {ECO:0000255}.
TOPO_DOM 354 363 Periplasmic. {ECO:0000255}.
TRANSMEM 364 384 Helical. {ECO:0000255}.
TOPO_DOM 385 396 Cytoplasmic. {ECO:0000255}.
SEQUENCE 396 AA; 42538 MW; CB6A34CA4EE6D4F0 CRC64;
MTTNTVSRKV AWLRVVTLAV AAFIFNTTEF VPVGLLSDIA QSFHMQTAQV GIMLTIYAWV
VALMSLPFML MTSQVERRKL LICLFVVFIA SHVLSFLSWS FTVLVISRIG VAFAHAIFWS
ITASLAIRMA PAGKRAQALS LIATGTALAM VLGLPLGRIV GQYFGWRMTF FAIGIGALIT
LLCLIKLLPL LPSEHSGSLK SLPLLFRRPA LMSIYLLTVV VVTAHYTAYS YIEPFVQNIA
GFSANFATAL LLLLGGAGII GSVIFGKLGN QYASALVSTA IALLLVCLAL LLPAANSEIH
LGVLSIFWGI AMMIIGLGMQ VKVLALAPDA TDVAMALFSG IFNIGIGAGA LVGNQVSLHW
SMSMIGYVGA VPAFAALIWS IIIFRRWPVT LEEQTQ


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