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Synaptosomal-associated protein 25-A (SNAP-25A) (Synaptosome-associated protein 25.1) (SNAP-25.1)

 SN25A_DANRE             Reviewed;         204 AA.
Q5TZ66; O93578; Q5TZ65; Q6P3L7;
16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
07-DEC-2004, sequence version 1.
07-JUN-2017, entry version 97.
RecName: Full=Synaptosomal-associated protein 25-A {ECO:0000250|UniProtKB:P36977};
Short=SNAP-25A {ECO:0000250|UniProtKB:P36977};
AltName: Full=Synaptosome-associated protein 25.1 {ECO:0000303|PubMed:9843147};
Short=SNAP-25.1 {ECO:0000303|PubMed:9843147};
Name=snap25a {ECO:0000312|ZFIN:ZDB-GENE-980526-468};
Synonyms=Snap {ECO:0000312|EMBL:AAC64289.1},
snap25.1 {ECO:0000303|PubMed:9843147}; ORFNames=si:dkeyp-8f4.6;
Danio rerio (Zebrafish) (Brachydanio rerio).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
Cyprinidae; Danio.
NCBI_TaxID=7955;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Tuebingen;
PubMed=23594743; DOI=10.1038/nature12111;
Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G.,
Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B.,
Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S.,
Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C.,
Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H.,
Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C.,
Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
Humphries M., Sycamore N., Barker D., Saunders D., Wallis J.,
Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S.,
Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R.,
Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R.,
Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R.,
Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A.,
Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M.,
Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M.,
Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S.,
Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J.,
Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
Stemple D.L.;
"The zebrafish reference genome sequence and its relationship to the
human genome.";
Nature 496:498-503(2013).
[2] {ECO:0000305, ECO:0000312|EMBL:CAH69031.1}
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
NIH - Zebrafish Gene Collection (ZGC) project;
Submitted (DEC-2003) to the EMBL/GenBank/DDBJ databases.
[3] {ECO:0000305, ECO:0000312|EMBL:AAC64289.1}
NUCLEOTIDE SEQUENCE [MRNA] OF 81-204 (ISOFORM 1), AND TISSUE
SPECIFICITY.
PubMed=9843147;
DOI=10.1002/(SICI)1097-4547(19981201)54:5<563::AID-JNR1>3.3.CO;2-Z;
Risinger C., Salaneck E., Soederberg C., Gates M., Postlethwait J.H.,
Larhammar D.;
"Cloning of two loci for synapse protein Snap25 in zebrafish:
comparison of paralogous linkage groups suggests loss of one locus in
the mammalian lineage.";
J. Neurosci. Res. 54:563-573(1998).
-!- FUNCTION: May play an important role in the synaptic function of
specific neuronal systems. Associates with proteins involved in
vesicle docking and membrane fusion. {ECO:0000305}.
-!- SUBCELLULAR LOCATION: Cell junction, synapse, synaptosome
{ECO:0000250|UniProtKB:P36977, ECO:0000250|UniProtKB:P60880}. Cell
membrane {ECO:0000250|UniProtKB:P60881}. Note=Complexed with
macromolecular elements of the nerve terminal.
{ECO:0000250|UniProtKB:P36977, ECO:0000250|UniProtKB:P60880}.
-!- ALTERNATIVE PRODUCTS:
Event=Alternative splicing; Named isoforms=2;
Comment=Isoforms differ by the usage of two alternative
homologous exons which code for positions 55 to 94 and differ
only in 11 positions out of 40.;
Name=1 {ECO:0000269|PubMed:9843147};
IsoId=Q5TZ66-1; Sequence=Displayed;
Name=2;
IsoId=Q5TZ66-2; Sequence=VSP_052974;
Note=Gene prediction based on EST data.;
-!- TISSUE SPECIFICITY: Expressed in several regions throughout the
adult brain, including the mesencephalon.
{ECO:0000269|PubMed:9843147}.
-!- SIMILARITY: Belongs to the SNAP-25 family. {ECO:0000255}.
-----------------------------------------------------------------------
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EMBL; BX465184; CAH69031.1; -; Genomic_DNA.
EMBL; BX470246; CAH69031.1; JOINED; Genomic_DNA.
EMBL; BX465184; CAH69032.1; -; Genomic_DNA.
EMBL; BX470246; CAH69032.1; JOINED; Genomic_DNA.
EMBL; BX470246; CAI21359.1; -; Genomic_DNA.
EMBL; BX465184; CAI21359.1; JOINED; Genomic_DNA.
EMBL; BX470246; CAI21360.1; -; Genomic_DNA.
EMBL; BX465184; CAI21360.1; JOINED; Genomic_DNA.
EMBL; BC063942; AAH63942.1; -; mRNA.
EMBL; AF091593; AAC64289.1; -; mRNA.
RefSeq; NP_571510.1; NM_131435.1.
RefSeq; XP_005160680.1; XM_005160623.3. [Q5TZ66-2]
UniGene; Dr.79639; -.
ProteinModelPortal; Q5TZ66; -.
SMR; Q5TZ66; -.
STRING; 7955.ENSDARP00000019054; -.
PaxDb; Q5TZ66; -.
Ensembl; ENSDART00000007584; ENSDARP00000019054; ENSDARG00000020609. [Q5TZ66-1]
Ensembl; ENSDART00000062738; ENSDARP00000062737; ENSDARG00000020609. [Q5TZ66-2]
Ensembl; ENSDART00000172001; ENSDARP00000132680; ENSDARG00000020609. [Q5TZ66-2]
GeneID; 30712; -.
KEGG; dre:30712; -.
CTD; 30712; -.
ZFIN; ZDB-GENE-980526-468; snap25a.
eggNOG; KOG3065; Eukaryota.
eggNOG; ENOG410Y3Y0; LUCA.
GeneTree; ENSGT00390000012186; -.
HOGENOM; HOG000231599; -.
HOVERGEN; HBG056971; -.
InParanoid; Q5TZ66; -.
KO; K18211; -.
OMA; GEMDENL; -.
OrthoDB; EOG091G0N7J; -.
PhylomeDB; Q5TZ66; -.
TreeFam; TF315125; -.
Reactome; R-DRE-181430; Norepinephrine Neurotransmitter Release Cycle.
Reactome; R-DRE-210500; Glutamate Neurotransmitter Release Cycle.
Reactome; R-DRE-264642; Acetylcholine Neurotransmitter Release Cycle.
Reactome; R-DRE-6798695; Neutrophil degranulation.
Reactome; R-DRE-888590; GABA synthesis, release, reuptake and degradation.
PRO; PR:Q5TZ66; -.
Proteomes; UP000000437; Chromosome 20.
Bgee; ENSDARG00000020609; -.
ExpressionAtlas; Q5TZ66; baseline.
GO; GO:0030054; C:cell junction; IEA:UniProtKB-KW.
GO; GO:0005737; C:cytoplasm; ISS:UniProtKB.
GO; GO:0016020; C:membrane; ISS:UniProtKB.
GO; GO:0043005; C:neuron projection; IEA:UniProtKB-SubCell.
GO; GO:0005886; C:plasma membrane; IDA:ZFIN.
GO; GO:0098793; C:presynapse; IEA:GOC.
GO; GO:0031201; C:SNARE complex; ISS:UniProtKB.
GO; GO:0070032; C:synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex; IBA:GO_Central.
GO; GO:0005484; F:SNAP receptor activity; IBA:GO_Central.
GO; GO:0017075; F:syntaxin-1 binding; IBA:GO_Central.
GO; GO:0007626; P:locomotory behavior; IMP:ZFIN.
GO; GO:0000281; P:mitotic cytokinesis; IMP:ZFIN.
GO; GO:0031629; P:synaptic vesicle fusion to presynaptic active zone membrane; IBA:GO_Central.
GO; GO:0016082; P:synaptic vesicle priming; IBA:GO_Central.
InterPro; IPR000928; SNAP-25.
InterPro; IPR000727; T_SNARE_dom.
Pfam; PF00835; SNAP-25; 1.
SMART; SM00397; t_SNARE; 2.
PROSITE; PS50192; T_SNARE; 2.
2: Evidence at transcript level;
Alternative splicing; Cell junction; Cell membrane; Coiled coil;
Complete proteome; Membrane; Reference proteome; Repeat; Synapse;
Synaptosome.
CHAIN 1 204 Synaptosomal-associated protein 25-A.
/FTId=PRO_0000355574.
DOMAIN 19 81 t-SNARE coiled-coil homology 1.
{ECO:0000255|PROSITE-ProRule:PRU00202}.
DOMAIN 138 200 t-SNARE coiled-coil homology 2.
{ECO:0000255|PROSITE-ProRule:PRU00202}.
VAR_SEQ 58 89 ERIEEGMDQINKDMKDAEKNLNDLGKFCGLCS -> DRVED
GMNHINQDMKEAEKNLKDLGKCCGLFI (in isoform
2). {ECO:0000305}.
/FTId=VSP_052974.
CONFLICT 190 190 I -> F (in Ref. 2; AAH63942).
{ECO:0000305}.
SEQUENCE 204 AA; 22857 MW; B53CF5F3D1C69EA5 CRC64;
MAEDSDMRNE LADMQQRADQ LADESLESTR RMLQLVEESK DAGIRTLVML DEQGEQLERI
EEGMDQINKD MKDAEKNLND LGKFCGLCSC PCNKMKSGAS KAWGNNQDGV VASQPARVVD
EREQMAISGG FIRRVTDDAR ENEMDENLEQ VGGIIGNLRH MALDMGNEID TQNRQIDRIM
EKADSNKTRI DEANQRATKM LGSG


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