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Syntaxin-132 (AtSYP132)

 SY132_ARATH             Reviewed;         304 AA.
Q8VZU2; Q9LEZ8;
12-FEB-2003, integrated into UniProtKB/Swiss-Prot.
01-MAR-2002, sequence version 1.
12-SEP-2018, entry version 125.
RecName: Full=Syntaxin-132;
Short=AtSYP132;
Name=SYP132; OrderedLocusNames=At5g08080; ORFNames=T22D6.20;
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=11130714; DOI=10.1038/35048507;
Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K.,
Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S.,
Nakazaki N., Naruo K., Okumura S., Shinpo S., Takeuchi C., Wada T.,
Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M.,
Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R.,
Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J.,
Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M.,
Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M.,
Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P.,
Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C.,
Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N.,
Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J.,
Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S.,
Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W.,
Ramsperger U., Wedler H., Balke K., Wedler E., Peters S.,
van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R.,
Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S.,
Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W.,
Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H.,
Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.;
"Sequence and analysis of chromosome 5 of the plant Arabidopsis
thaliana.";
Nature 408:823-826(2000).
[2]
GENOME REANNOTATION.
STRAIN=cv. Columbia;
PubMed=27862469; DOI=10.1111/tpj.13415;
Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
Town C.D.;
"Araport11: a complete reannotation of the Arabidopsis thaliana
reference genome.";
Plant J. 89:789-804(2017).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
PubMed=14593172; DOI=10.1126/science.1088305;
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J.,
Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F.,
Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.,
Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J.,
Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y.,
Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P.,
Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F.,
Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M.,
Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J.,
Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T.,
Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y.,
Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis
genome.";
Science 302:842-846(2003).
[4]
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
PubMed=19376835; DOI=10.1104/pp.109.138677;
Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A.,
Grossmann J., Gruissem W., Baginsky S.;
"Large-scale Arabidopsis phosphoproteome profiling reveals novel
chloroplast kinase substrates and phosphorylation networks.";
Plant Physiol. 150:889-903(2009).
-!- FUNCTION: Vesicle trafficking protein that functions in the
secretory pathway. {ECO:0000250}.
-!- SUBUNIT: Part of the t-SNARE complex. {ECO:0000250}.
-!- SUBCELLULAR LOCATION: Membrane {ECO:0000250}; Single-pass type IV
membrane protein {ECO:0000250}.
-!- ALTERNATIVE PRODUCTS:
Event=Alternative splicing; Named isoforms=1;
Comment=A number of isoforms are produced. According to EST
sequences.;
Name=1;
IsoId=Q8VZU2-1; Sequence=Displayed;
-!- SIMILARITY: Belongs to the syntaxin family. {ECO:0000305}.
-!- SEQUENCE CAUTION:
Sequence=CAB93709.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
-----------------------------------------------------------------------
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Distributed under the Creative Commons Attribution (CC BY 4.0) License
-----------------------------------------------------------------------
EMBL; AL357612; CAB93709.1; ALT_SEQ; Genomic_DNA.
EMBL; CP002688; AED91242.1; -; Genomic_DNA.
EMBL; CP002688; ANM70609.1; -; Genomic_DNA.
EMBL; AY063836; AAL36192.1; -; mRNA.
EMBL; AY117244; AAM51319.1; -; mRNA.
PIR; T50493; T50493.
RefSeq; NP_001332203.1; NM_001342979.1. [Q8VZU2-1]
RefSeq; NP_568187.1; NM_120890.3. [Q8VZU2-1]
UniGene; At.27182; -.
ProteinModelPortal; Q8VZU2; -.
SMR; Q8VZU2; -.
BioGrid; 15980; 53.
IntAct; Q8VZU2; 53.
iPTMnet; Q8VZU2; -.
SwissPalm; Q8VZU2; -.
PRIDE; Q8VZU2; -.
EnsemblPlants; AT5G08080.1; AT5G08080.1; AT5G08080. [Q8VZU2-1]
EnsemblPlants; AT5G08080.4; AT5G08080.4; AT5G08080. [Q8VZU2-1]
GeneID; 830702; -.
Gramene; AT5G08080.1; AT5G08080.1; AT5G08080. [Q8VZU2-1]
Gramene; AT5G08080.4; AT5G08080.4; AT5G08080. [Q8VZU2-1]
KEGG; ath:AT5G08080; -.
Araport; AT5G08080; -.
HOGENOM; HOG000238904; -.
InParanoid; Q8VZU2; -.
KO; K08486; -.
PhylomeDB; Q8VZU2; -.
Reactome; R-ATH-449836; Other interleukin signaling.
PRO; PR:Q8VZU2; -.
Proteomes; UP000006548; Chromosome 5.
ExpressionAtlas; Q8VZU2; baseline and differential.
Genevisible; Q8VZU2; AT.
GO; GO:0016021; C:integral component of membrane; IBA:GO_Central.
GO; GO:0031201; C:SNARE complex; IBA:GO_Central.
GO; GO:0005484; F:SNAP receptor activity; IEA:InterPro.
GO; GO:0000149; F:SNARE binding; IBA:GO_Central.
GO; GO:0006887; P:exocytosis; IBA:GO_Central.
GO; GO:0006886; P:intracellular protein transport; IEA:InterPro.
GO; GO:0048278; P:vesicle docking; IBA:GO_Central.
GO; GO:0006906; P:vesicle fusion; IBA:GO_Central.
CDD; cd00179; SynN; 1.
InterPro; IPR010989; SNARE.
InterPro; IPR006012; Syntaxin/epimorphin_CS.
InterPro; IPR006011; Syntaxin_N.
InterPro; IPR000727; T_SNARE_dom.
Pfam; PF05739; SNARE; 1.
Pfam; PF00804; Syntaxin; 1.
SMART; SM00503; SynN; 1.
SMART; SM00397; t_SNARE; 1.
SUPFAM; SSF47661; SSF47661; 1.
PROSITE; PS00914; SYNTAXIN; 1.
PROSITE; PS50192; T_SNARE; 1.
1: Evidence at protein level;
Acetylation; Alternative splicing; Coiled coil; Complete proteome;
Membrane; Protein transport; Reference proteome; Transmembrane;
Transmembrane helix; Transport.
CHAIN 1 304 Syntaxin-132.
/FTId=PRO_0000210252.
TOPO_DOM 1 275 Cytoplasmic. {ECO:0000255}.
TRANSMEM 276 296 Helical; Anchor for type IV membrane
protein. {ECO:0000255}.
TOPO_DOM 297 304 Vesicular. {ECO:0000255}.
DOMAIN 204 266 t-SNARE coiled-coil homology.
{ECO:0000255|PROSITE-ProRule:PRU00202}.
COILED 34 67 {ECO:0000255}.
COILED 129 162 {ECO:0000255}.
MOD_RES 1 1 N-acetylmethionine.
{ECO:0000250|UniProtKB:Q9ZSD4}.
SEQUENCE 304 AA; 34225 MW; 8A6B7A962C43ACF2 CRC64;
MNDLLKGSFE LPRGQSSREG DVELGEQQGG DQGLEDFFKK VQVIDKQYDK LDKLLKKLQA
SHEESKSVTK APAMKAIKKT MEKDVDEVGS IARFIKGKLE ELDRENLANR QKPGCAKGSG
VDRSRTATTL SLKKKLKDKM AEFQVLRENI QQEYRDVVDR RVYTVTGERA DEDTIDELIE
TGNSEQIFQK AIQEQGRGQV MDTLAEIQER HDAVRDLEKK LLDLQQIFLD MAVLVDAQGE
MLDNIESQVS SAVDHVQSGN TALQRAKSLQ KNSRKWMCIA IIILLIVVAV IVVGVLKPWK
NKSA


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