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Terminal acidic SANT 1

 Q5EUJ4_MAIZE            Unreviewed;       422 AA.
Q5EUJ4;
15-MAR-2005, integrated into UniProtKB/TrEMBL.
15-MAR-2005, sequence version 1.
10-OCT-2018, entry version 107.
SubName: Full=Terminal acidic SANT 1 {ECO:0000313|EMBL:AAV28560.1};
Name=542591 {ECO:0000313|EnsemblPlants:Zm00001d036356_P003};
ORFNames=ZEAMMB73_Zm00001d036356 {ECO:0000313|EMBL:AQK80834.1};
Zea mays (Maize).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae;
PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae;
Zea.
NCBI_TaxID=4577 {ECO:0000313|EMBL:AAV28560.1};
[1] {ECO:0000313|EMBL:AAV28560.1}
NUCLEOTIDE SEQUENCE.
PubMed=15716051; DOI=10.1016/j.bbaexp.2004.12.010;
Marian C.O., Bass H.W.;
"The Terminal acidic SANT 1 (Tacs1) gene of maize is expressed in
tissues containing meristems and encodes an acidic SANT domain similar
to some chromatin-remodeling complex proteins.";
Biochim. Biophys. Acta 1727:81-86(2005).
[2] {ECO:0000313|EMBL:ACG40093.1}
NUCLEOTIDE SEQUENCE.
PubMed=18937034; DOI=10.1007/s11103-008-9415-4;
Alexandrov N.N., Brover V.V., Freidin S., Troukhan M.E.,
Tatarinova T.V., Zhang H., Swaller T.J., Lu Y.P., Bouck J.,
Flavell R.B., Feldmann K.A.;
"Insights into corn genes derived from large-scale cDNA sequencing.";
Plant Mol. Biol. 69:179-194(2009).
[3] {ECO:0000313|EMBL:ACR36002.1}
NUCLEOTIDE SEQUENCE.
STRAIN=B73 {ECO:0000313|EMBL:ACR36002.1};
PubMed=19936069; DOI=10.1371/journal.pgen.1000740;
Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J.,
Angelova A., Collura K., Wissotski M., Ashley E., Morrow D.,
Fernandes J., Walbot V., Yu Y.;
"Sequencing, mapping, and analysis of 27,455 maize full-length
cDNAs.";
PLoS Genet. 5:E1000740-E1000740(2009).
[4] {ECO:0000313|Proteomes:UP000007305}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. B73 {ECO:0000313|Proteomes:UP000007305};
PubMed=19965430; DOI=10.1126/science.1178534;
Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K.,
Abbott R.M., Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M.,
Gillam B., Chen W., Yan L., Higginbotham J., Cardenas M.,
Waligorski J., Applebaum E., Phelps L., Falcone J., Kanchi K.,
Thane T., Scimone A., Thane N., Henke J., Wang T., Ruppert J.,
Shah N., Rotter K., Hodges J., Ingenthron E., Cordes M., Kohlberg S.,
Sgro J., Delgado B., Mead K., Chinwalla A., Leonard S., Crouse K.,
Collura K., Kudrna D., Currie J., He R., Angelova A., Rajasekar S.,
Mueller T., Lomeli R., Scara G., Ko A., Delaney K., Wissotski M.,
Lopez G., Campos D., Braidotti M., Ashley E., Golser W., Kim H.,
Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A., Fan C.,
Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A.,
Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y.,
Jeddeloh J.A., Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z.,
Nagel D.H., McCann M.C., SanMiguel P., Myers A.M., Nettleton D.,
Nguyen J., Penning B.W., Ponnala L., Schneider K.L., Schwartz D.C.,
Sharma A., Soderlund C., Springer N.M., Sun Q., Wang H., Waterman M.,
Westerman R., Wolfgruber T.K., Yang L., Yu Y., Zhang L., Zhou S.,
Zhu Q., Bennetzen J.L., Dawe R.K., Jiang J., Jiang N., Presting G.G.,
Wessler S.R., Aluru S., Martienssen R.A., Clifton S.W., McCombie W.R.,
Wing R.A., Wilson R.K.;
"The B73 maize genome: complexity, diversity, and dynamics.";
Science 326:1112-1115(2009).
[5] {ECO:0000313|EMBL:AQK80834.1}
NUCLEOTIDE SEQUENCE.
TISSUE=Seedling {ECO:0000313|EMBL:AQK80834.1};
Maize Genome Sequencing Project;
Ware D.;
"Update maize B73 reference genome by single molecule sequencing
technologies.";
Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
[6] {ECO:0000313|EnsemblPlants:Zm00001d036356_P003}
IDENTIFICATION.
STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001d036356_P003};
EnsemblPlants;
Submitted (MAY-2017) to UniProtKB.
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EMBL; AY738116; AAV28560.1; -; mRNA.
EMBL; EU967975; ACG40093.1; -; mRNA.
EMBL; BT085649; ACR36002.1; -; mRNA.
EMBL; CM000782; AQK80834.1; -; Genomic_DNA.
RefSeq; NP_001105597.1; NM_001112127.1.
UniGene; Zm.10411; -.
STRING; 4577.GRMZM2G111906_P01; -.
PaxDb; Q5EUJ4; -.
EnsemblPlants; Zm00001d036356_T003; Zm00001d036356_P003; Zm00001d036356.
GeneID; 542591; -.
Gramene; Zm00001d036356_T003; Zm00001d036356_P003; Zm00001d036356.
KEGG; zma:542591; -.
eggNOG; ENOG410J38J; Eukaryota.
eggNOG; ENOG410XXSP; LUCA.
HOGENOM; HOG000241717; -.
KO; K11111; -.
OMA; PRLMPED; -.
OrthoDB; EOG09360NCB; -.
Proteomes; UP000007305; Chromosome 6.
ExpressionAtlas; Q5EUJ4; baseline and differential.
GO; GO:0003677; F:DNA binding; IEA:InterPro.
InterPro; IPR009057; Homeobox-like_sf.
InterPro; IPR017930; Myb_dom.
InterPro; IPR001005; SANT/Myb.
Pfam; PF00249; Myb_DNA-binding; 1.
SMART; SM00717; SANT; 1.
SUPFAM; SSF46689; SSF46689; 1.
PROSITE; PS51294; HTH_MYB; 1.
2: Evidence at transcript level;
Complete proteome {ECO:0000313|Proteomes:UP000007305};
Reference proteome {ECO:0000313|Proteomes:UP000007305}.
DOMAIN 365 422 HTH myb-type.
{ECO:0000259|PROSITE:PS51294}.
SEQUENCE 422 AA; 45064 MW; D60F327F61F5E438 CRC64;
MPRLTPAHAT LILDHVLGDP SIPTAVTIAL IAGIPSPSDP TPRLRRGVLL RRLATDPVSE
SSLETLHLLA SLPACASPIA AAHIAVAAFL AASAPDFDAV ARALFARPDG RARQAVHGGS
SPALASDDAI ATVDQFEAAV GMSSSQTILR VLWGNRAAVE ERVQELLAAE WAAIGPSRLE
ALAMRIVGDG AVDTWGAADE AMRANLRILA GEAKTREILD KLEKTTCNTN PISTPAVEKV
MDALKASCAD LHSIVEDPLP AAKAVADELL TARMEKLVSL NAQEVGGQPT TCGVAGPSIH
NDKDNGPGIG KPHSLMERNA TARTSQWEES LGLDGSEPPS PPRPHLPSPR RLPPSPLSPP
GNKNNNRRKA RRWSLFEEET LRKGVEEYGV GNWRDILDNN AEAFTGRTPV DLKDKWRNML
FR


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