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Tetraspanin-32 (Tspan-32) (AML1-regulated transmembrane protein 1) (Protein Phemx)

 TSN32_MOUSE             Reviewed;         256 AA.
Q9JHH2; Q923G9; Q9ESH0; Q9JHQ9; Q9JHR0; Q9JHR1; Q9JHR2; Q9JHS8;
27-MAR-2002, integrated into UniProtKB/Swiss-Prot.
27-MAR-2002, sequence version 2.
28-FEB-2018, entry version 116.
RecName: Full=Tetraspanin-32;
Short=Tspan-32;
AltName: Full=AML1-regulated transmembrane protein 1;
AltName: Full=Protein Phemx;
Name=Tspan32; Synonyms=Art1, Phemx, Tssc6;
Mus musculus (Mouse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
NCBI_TaxID=10090;
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), TISSUE SPECIFICITY, AND
DEVELOPMENTAL STAGE.
STRAIN=C57BL/6J;
PubMed=10950922; DOI=10.1006/geno.2000.6277;
Nicholson R.H., Pantano S., Eliason J.F., Galy A., Weiler S.,
Kaplan J., Hughes M.R., Ko M.S.H.;
"Phemx, a novel mouse gene expressed in hematopoietic cells maps to
the imprinted cluster on distal chromosome 7.";
Genomics 68:13-21(2000).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] (ISOFORMS 1; 2; 3; 4 AND 5).
STRAIN=129/Sv, and C57BL/6J;
PubMed=10915772; DOI=10.1093/hmg/9.12.1829;
Paulsen M., El-Maarri O., Engemann S., Stroedicke M., Franck O.,
Davies K., Reinhardt R., Reik W., Walter J.;
"Sequence conservation and variability of imprinting in the Beckwith-
Wiedemann syndrome gene cluster in human and mouse.";
Hum. Mol. Genet. 9:1829-1841(2000).
[3]
NUCLEOTIDE SEQUENCE (ISOFORM 6).
PubMed=11718897; DOI=10.1016/S0167-4781(01)00306-2;
Robb L., Tarrant J., Groom J., Ibrahim M., Li R., Borobakas B.,
Wright M.D.;
"Molecular characterisation of mouse and human TSSC6: evidence that
TSSC6 is a genuine member of the tetraspanin superfamily and is
expressed specifically in haematopoietic organs.";
Biochim. Biophys. Acta 1522:31-41(2001).
[4]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
STRAIN=C57BL/6J; TISSUE=Spleen;
PubMed=11396961; DOI=10.1006/bbrc.2001.5005;
Harada Y., Harada H., Downing J.R., Kimura A.;
"A hematopoietic-specific transmembrane protein, Art-1, is possibly
regulated by aml1.";
Biochem. Biophys. Res. Commun. 284:714-722(2001).
-!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
protein {ECO:0000305}.
-!- ALTERNATIVE PRODUCTS:
Event=Alternative splicing; Named isoforms=6;
Comment=Additional isoforms seem to exist.;
Name=6;
IsoId=Q9JHH2-1; Sequence=Displayed;
Name=1;
IsoId=Q9JHH2-2; Sequence=VSP_003939;
Name=2;
IsoId=Q9JHH2-3; Sequence=VSP_003939, VSP_003941;
Name=3;
IsoId=Q9JHH2-4; Sequence=VSP_003939, VSP_003942, VSP_003943;
Name=4;
IsoId=Q9JHH2-5; Sequence=VSP_003939, VSP_003940, VSP_003941;
Name=5;
IsoId=Q9JHH2-6; Sequence=VSP_003939, VSP_003940, VSP_003942;
-!- TISSUE SPECIFICITY: Expressed exclusively in hematopoietic
tissues. Expression detected in spleen, thymus, bone marrow and
peripheral blood leukocytes but not in heart, brain, lung, liver,
kidney or testis. {ECO:0000269|PubMed:10950922}.
-!- DEVELOPMENTAL STAGE: Expressed from early embryogenesis through to
adulthood. {ECO:0000269|PubMed:10950922}.
-!- SIMILARITY: Belongs to the tetraspanin (TM4SF) family.
{ECO:0000305}.
-----------------------------------------------------------------------
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EMBL; AF175771; AAG27268.1; -; mRNA.
EMBL; AJ251788; CAB94716.1; -; Genomic_DNA.
EMBL; AJ251835; CAB94777.1; -; Genomic_DNA.
EMBL; AJ279791; CAB94719.1; -; mRNA.
EMBL; AJ279792; CAB94720.1; -; mRNA.
EMBL; AJ279793; CAB94721.1; -; mRNA.
EMBL; AJ279794; CAB94722.1; -; mRNA.
EMBL; AJ279795; CAB94723.1; -; mRNA.
EMBL; AY039000; AAK84430.1; -; mRNA.
EMBL; AF291425; AAK83110.1; -; mRNA.
CCDS; CCDS52459.1; -. [Q9JHH2-1]
RefSeq; NP_001121552.1; NM_001128080.2. [Q9JHH2-1]
RefSeq; NP_001121553.1; NM_001128081.1.
RefSeq; NP_001121554.1; NM_001128082.1.
RefSeq; NP_064682.1; NM_020286.3.
UniGene; Mm.28172; -.
ProteinModelPortal; Q9JHH2; -.
STRING; 10090.ENSMUSP00000009396; -.
PhosphoSitePlus; Q9JHH2; -.
PaxDb; Q9JHH2; -.
PRIDE; Q9JHH2; -.
Ensembl; ENSMUST00000009396; ENSMUSP00000009396; ENSMUSG00000000244. [Q9JHH2-1]
GeneID; 27027; -.
KEGG; mmu:27027; -.
UCSC; uc009kom.2; mouse. [Q9JHH2-1]
CTD; 10077; -.
MGI; MGI:1350360; Tspan32.
eggNOG; ENOG410IY3A; Eukaryota.
eggNOG; ENOG410YXBH; LUCA.
GeneTree; ENSGT00390000003287; -.
HOVERGEN; HBG053580; -.
InParanoid; Q9JHH2; -.
KO; K17359; -.
OMA; LTYFGAH; -.
OrthoDB; EOG091G0JTB; -.
PhylomeDB; Q9JHH2; -.
TreeFam; TF336277; -.
PRO; PR:Q9JHH2; -.
Proteomes; UP000000589; Chromosome 7.
Bgee; ENSMUSG00000000244; -.
CleanEx; MM_ART1; -.
CleanEx; MM_TSPAN32; -.
ExpressionAtlas; Q9JHH2; baseline and differential.
Genevisible; Q9JHH2; MM.
GO; GO:0009986; C:cell surface; IDA:MGI.
GO; GO:0070442; C:integrin alphaIIb-beta3 complex; IDA:MGI.
GO; GO:0005622; C:intracellular; IDA:MGI.
GO; GO:0007596; P:blood coagulation; IMP:MGI.
GO; GO:0007010; P:cytoskeleton organization; IMP:MGI.
GO; GO:0042832; P:defense response to protozoan; IGI:MGI.
GO; GO:0007599; P:hemostasis; IMP:MGI.
GO; GO:0007229; P:integrin-mediated signaling pathway; IMP:MGI.
GO; GO:0008285; P:negative regulation of cell proliferation; IGI:MGI.
GO; GO:0030886; P:negative regulation of myeloid dendritic cell activation; IGI:MGI.
GO; GO:0070527; P:platelet aggregation; IMP:MGI.
GO; GO:0050688; P:regulation of defense response to virus; IGI:MGI.
InterPro; IPR000301; Tetraspanin.
InterPro; IPR008952; Tetraspanin_EC2_sf.
PIRSF; PIRSF002419; Tetraspanin; 1.
SUPFAM; SSF48652; SSF48652; 1.
2: Evidence at transcript level;
Alternative splicing; Complete proteome; Membrane; Reference proteome;
Transmembrane; Transmembrane helix.
CHAIN 1 256 Tetraspanin-32.
/FTId=PRO_0000219279.
TRANSMEM 15 35 Helical. {ECO:0000255}.
TRANSMEM 61 81 Helical. {ECO:0000255}.
TRANSMEM 90 110 Helical. {ECO:0000255}.
TRANSMEM 203 223 Helical. {ECO:0000255}.
VAR_SEQ 1 30 Missing (in isoform 1, isoform 2, isoform
3, isoform 4 and isoform 5).
{ECO:0000303|PubMed:10915772,
ECO:0000303|PubMed:10950922,
ECO:0000303|PubMed:11396961}.
/FTId=VSP_003939.
VAR_SEQ 119 152 Missing (in isoform 4 and isoform 5).
{ECO:0000303|PubMed:10915772}.
/FTId=VSP_003940.
VAR_SEQ 182 209 Missing (in isoform 2 and isoform 4).
{ECO:0000303|PubMed:10915772}.
/FTId=VSP_003941.
VAR_SEQ 182 206 DCLQSIRNVLWTHYSIASILTCTSL -> IPWFPDPGTQPL
QMDLGWAGASMPC (in isoform 3 and isoform
5). {ECO:0000303|PubMed:10915772}.
/FTId=VSP_003942.
VAR_SEQ 207 236 Missing (in isoform 3).
{ECO:0000303|PubMed:10915772}.
/FTId=VSP_003943.
CONFLICT 174 174 Q -> L (in Ref. 1; AAG27268).
{ECO:0000305}.
CONFLICT 235 235 Y -> F (in Ref. 1; AAG27268).
{ECO:0000305}.
SEQUENCE 256 AA; 28906 MW; A20EF0F6248FF67A CRC64;
MGHWNRIKIA KCQILITNFL VLLLGLSMAT MVVVIHFGDH FTVIGHASLE RNPYETLRYW
AFYVGISLAG LLSLGAALST IATVREAHGL MAAGFLCFAL SFCILVQVAF WRFYNPTQVE
DAVLDTYDFV YDQAMKSPSS NWWQELAVIQ DTFLCCGKKS PFGLLVSTGA IMCQGREAMR
EDCLQSIRNV LWTHYSIASI LTCTSLALTV YAMMLCAFLW FAIHSYHGLD RKGRYSLTPP
RSHGFQTQEP SLFRWT


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