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Toll-like receptor 3

 Q7TNI8_RAT              Unreviewed;       905 AA.
Q7TNI8;
01-OCT-2003, integrated into UniProtKB/TrEMBL.
01-OCT-2003, sequence version 1.
23-MAY-2018, entry version 110.
SubName: Full=Toll-like receptor 3 {ECO:0000313|EMBL:BAC81504.1};
Name=Tlr3 {ECO:0000313|RGD:735171};
Rattus norvegicus (Rat).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
NCBI_TaxID=10116 {ECO:0000313|EMBL:BAC81504.1};
[1] {ECO:0000313|EMBL:BAC81504.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Sprague-Dawley {ECO:0000313|EMBL:BAC81504.1};
Tamura H., Oikawa A., Kato H.;
"Identification of a gene encoding rat toll-like receptor 3.";
Submitted (AUG-2003) to the EMBL/GenBank/DDBJ databases.
-!- SIMILARITY: Belongs to the Toll-like receptor family.
{ECO:0000256|SAAS:SAAS00598595}.
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EMBL; AB116229; BAC81504.1; -; mRNA.
RefSeq; NP_942086.1; NM_198791.1.
UniGene; Rn.15273; -.
ProteinModelPortal; Q7TNI8; -.
iPTMnet; Q7TNI8; -.
PhosphoSitePlus; Q7TNI8; -.
GeneID; 364594; -.
KEGG; rno:364594; -.
CTD; 7098; -.
RGD; 735171; Tlr3.
eggNOG; KOG4641; Eukaryota.
eggNOG; COG4886; LUCA.
HOGENOM; HOG000251618; -.
HOVERGEN; HBG023181; -.
KO; K05401; -.
GO; GO:0009986; C:cell surface; IDA:RGD.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005622; C:intracellular; IDA:RGD.
GO; GO:0003725; F:double-stranded RNA binding; IDA:RGD.
GO; GO:0004888; F:transmembrane signaling receptor activity; IEA:InterPro.
GO; GO:0035690; P:cellular response to drug; IEP:RGD.
GO; GO:0071359; P:cellular response to dsRNA; IEP:RGD.
GO; GO:0071360; P:cellular response to exogenous dsRNA; IMP:RGD.
GO; GO:0035458; P:cellular response to interferon-beta; IEP:RGD.
GO; GO:0071346; P:cellular response to interferon-gamma; IEP:RGD.
GO; GO:0051607; P:defense response to virus; IEA:InterPro.
GO; GO:0008584; P:male gonad development; IEP:RGD.
GO; GO:0001774; P:microglial cell activation; IDA:RGD.
GO; GO:0002756; P:MyD88-independent toll-like receptor signaling pathway; IEA:InterPro.
GO; GO:0043065; P:positive regulation of apoptotic process; IEP:RGD.
GO; GO:0032722; P:positive regulation of chemokine production; IEA:InterPro.
GO; GO:0050729; P:positive regulation of inflammatory response; IEA:InterPro.
GO; GO:0045356; P:positive regulation of interferon-alpha biosynthetic process; ISS:UniProtKB.
GO; GO:0045359; P:positive regulation of interferon-beta biosynthetic process; ISS:UniProtKB.
GO; GO:0045078; P:positive regulation of interferon-gamma biosynthetic process; ISS:UniProtKB.
GO; GO:0043331; P:response to dsRNA; IDA:RGD.
GO; GO:0009615; P:response to virus; IEP:RGD.
GO; GO:0034138; P:toll-like receptor 3 signaling pathway; IEA:InterPro.
GO; GO:0002224; P:toll-like receptor signaling pathway; IDA:RGD.
Gene3D; 3.40.50.10140; -; 1.
Gene3D; 3.80.10.10; -; 1.
InterPro; IPR000483; Cys-rich_flank_reg_C.
InterPro; IPR001611; Leu-rich_rpt.
InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
InterPro; IPR032675; LRR_dom_sf.
InterPro; IPR000157; TIR_dom.
InterPro; IPR027173; TLR3.
InterPro; IPR035897; Toll_tir_struct_dom_sf.
PANTHER; PTHR44599; PTHR44599; 1.
Pfam; PF00560; LRR_1; 1.
Pfam; PF13855; LRR_8; 7.
Pfam; PF01582; TIR; 1.
SMART; SM00369; LRR_TYP; 15.
SMART; SM00082; LRRCT; 1.
SMART; SM00255; TIR; 1.
SUPFAM; SSF52200; SSF52200; 1.
PROSITE; PS51450; LRR; 19.
PROSITE; PS50104; TIR; 1.
2: Evidence at transcript level;
Immunity {ECO:0000256|SAAS:SAAS00472892};
Innate immunity {ECO:0000256|SAAS:SAAS00472892};
Leucine-rich repeat {ECO:0000256|SAAS:SAAS00488662};
Membrane {ECO:0000256|SAAS:SAAS00598878, ECO:0000256|SAM:Phobius};
Receptor {ECO:0000256|SAAS:SAAS00473103, ECO:0000313|EMBL:BAC81504.1};
Repeat {ECO:0000256|SAAS:SAAS00597472};
Transmembrane {ECO:0000256|SAAS:SAAS00598878,
ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAAS:SAAS00598878,
ECO:0000256|SAM:Phobius}.
TRANSMEM 7 24 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 705 726 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 755 859 TIR. {ECO:0000259|PROSITE:PS50104}.
SEQUENCE 905 AA; 103175 MW; 478326F3A695D3D1 CRC64;
MKGRSSYLIY SFGGLLSLWI LVVSSTNQCT VRYNVADCSH LKLTHIPDDL PSNITVLNLT
HNQLRGLPPA NFTRYSQLAL LDAGFNSISK LEPELCQILP LLKVLNLQHN ELSQISDQTF
AFCTNLTELH LMSNSIRKIK SNPFKNQKSL IKLDLSHNGL SSTKLGTWVQ LENLQELLLA
KNKIFALRNE ELDFLGNSSL QKLDLSSNPL KEFSPGCFHA IGKLFVLLLN NAQLNLDLTE
KLCWELSNTS IQNLSLANNQ LLATSNSTFS GLKQTNLTSL DLSYNSLRDV GNDAFSWLPH
LKYLSLEYNN IQRLTPHSFR GLSNLRYLSL KRAFTKQSVA LASHPNIDDF SFQWLKCLEH
LNMDDNTIPG IKSNTFTGLV SLKYLSLSKT FTGLQTLTNE TFVSLTHSPL LTLNLTKNHI
SKIASGTFSW LGQLRILDLG LNEIEQELTG QEWRGLGNIF EIYLSYNKYL QLTSKSFTLV
PSLQRLMLRR VALKSVDISP SPFRPLYNLT ILDLSNNNIA NLNEDLLEGL ENLEILDFQH
NNLARLWKHA NPGGPVNFLK GLSHLHILNL ESNGLDEIPV KVFKNLFELK SINLGLNNLN
TLLPSIFDDQ TSLRSLNLQK NLITSVEKSV FGPAFHNLNS LDMSFNPFDC TCESIAWFVT
WLNQTHTNIP ELSTHYLCNT PQRYHGLPVK LFDTSSCKDS APFQLLFIIN TSTLLTFILA
VLLIHFEGWR ISFYWNVSVH RILGFKEIDA QGEQFEYTAY IIHAQKDRDW VWEHFSPMEE
QDQSLKFCLE ERDFEAGVLG LEAIVNSIKR SRKIIFVITH HLLKDPLCRR FKVHHAVQQA
IEQNLDSIIL IFLQNIPDYK LNHALCLRRG MFKSHCILNW PIQKERINAF HHKLQVALGS
RNSAH


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