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Trans-acting T-cell-specific transcription factor GATA-3 (GATA-binding factor 3)

 GATA3_MOUSE             Reviewed;         443 AA.
P23772;
01-NOV-1991, integrated into UniProtKB/Swiss-Prot.
01-NOV-1991, sequence version 1.
22-NOV-2017, entry version 157.
RecName: Full=Trans-acting T-cell-specific transcription factor GATA-3;
AltName: Full=GATA-binding factor 3;
Name=Gata3; Synonyms=Gata-3;
Mus musculus (Mouse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
NCBI_TaxID=10090;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=2017177; DOI=10.1128/MCB.11.5.2778;
Ko L.J., Yamamoto M., Leonard M.W., George K.M., Ting P., Engel J.D.;
"Murine and human T-lymphocyte GATA-3 factors mediate transcription
through a cis-regulatory element within the human T-cell receptor
delta gene enhancer.";
Mol. Cell. Biol. 11:2778-2784(1991).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=C57BL/6J; TISSUE=Brain;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[3]
INTERACTION WITH TBX21, AND SUBCELLULAR LOCATION.
PubMed=15662016; DOI=10.1126/science.1103336;
Hwang E.S., Szabo S.J., Schwartzberg P.L., Glimcher L.H.;
"T helper cell fate specified by kinase-mediated interaction of T-bet
with GATA-3.";
Science 307:430-433(2005).
[4]
FUNCTION, YXKXHXXXRP MOTIF, AND MUTAGENESIS OF TYR-344; LYS-346;
HIS-348; ARG-352 AND PRO-353.
PubMed=17056504; DOI=10.4049/jimmunol.177.9.5801;
Shinnakasu R., Yamashita M., Shinoda K., Endo Y., Hosokawa H.,
Hasegawa A., Ikemizu S., Nakayama T.;
"Critical YxKxHxxxRP motif in the C-terminal region of GATA3 for its
DNA binding and function.";
J. Immunol. 177:5801-5810(2006).
[5]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-161, AND IDENTIFICATION
BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
TISSUE=Lung;
PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
"A tissue-specific atlas of mouse protein phosphorylation and
expression.";
Cell 143:1174-1189(2010).
[6]
INTERACTION WITH TBX21.
PubMed=21690296; DOI=10.1128/MCB.05383-11;
Chen A., Lee S.M., Gao B., Shannon S., Zhu Z., Fang D.;
"c-Abl-mediated tyrosine phosphorylation of the T-bet DNA-binding
domain regulates CD4+ T-cell differentiation and allergic lung
inflammation.";
Mol. Cell. Biol. 31:3445-3456(2011).
[7]
INTERACTION WITH TBX21.
PubMed=23616576; DOI=10.4049/jimmunol.1203403;
Jang E.J., Park H.R., Hong J.H., Hwang E.S.;
"Lysine 313 of T-box is crucial for modulation of protein stability,
DNA binding, and threonine phosphorylation of T-bet.";
J. Immunol. 190:5764-5770(2013).
[8]
X-RAY CRYSTALLOGRAPHY (2.7 ANGSTROMS) OF 308-370 IN COMPLEX WITH DNA,
AND DOMAIN.
PubMed=18621058; DOI=10.1016/j.jmb.2008.06.072;
Bates D.L., Chen Y., Kim G., Guo L., Chen L.;
"Crystal structures of multiple GATA zinc fingers bound to DNA reveal
new insights into DNA recognition and self-association by GATA.";
J. Mol. Biol. 381:1292-1306(2008).
-!- FUNCTION: Transcriptional activator which binds to the enhancer of
the T-cell receptor alpha and delta genes. Binds to the consensus
sequence 5'-AGATAG-3'. Required for the T-helper 2 (Th2)
differentiation process following immune and inflammatory
responses. {ECO:0000269|PubMed:17056504}.
-!- SUBUNIT: Interacts with TBX21 ('Tyr-525' phosphorylated form).
{ECO:0000269|PubMed:15662016, ECO:0000269|PubMed:21690296,
ECO:0000269|PubMed:23616576}.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:15662016}.
-!- TISSUE SPECIFICITY: T-cell specific.
-!- DOMAIN: Binds DNA via the 2 GATA-type zinc fingers. Each zinc
finger may bind either adjacent sites in a palindromic motif, or a
different DNA molecule allowing looping and long-range gene
regulation (By similarity). {ECO:0000250}.
-!- DOMAIN: The YxKxHxxxRP motif is critical for DNA-binding and
function. {ECO:0000269|PubMed:18621058}.
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EMBL; X55123; CAA38917.1; -; mRNA.
EMBL; BC062915; AAH62915.1; -; mRNA.
CCDS; CCDS15674.1; -.
PIR; B39794; B39794.
RefSeq; NP_032117.1; NM_008091.3.
RefSeq; XP_006497417.1; XM_006497354.1.
UniGene; Mm.313866; -.
PDB; 3DFV; X-ray; 3.10 A; C/D=308-370.
PDB; 3DFX; X-ray; 2.70 A; A/B=308-370.
PDBsum; 3DFV; -.
PDBsum; 3DFX; -.
ProteinModelPortal; P23772; -.
SMR; P23772; -.
BioGrid; 199840; 4.
DIP; DIP-29712N; -.
IntAct; P23772; 4.
STRING; 10090.ENSMUSP00000100041; -.
iPTMnet; P23772; -.
PhosphoSitePlus; P23772; -.
PaxDb; P23772; -.
PRIDE; P23772; -.
Ensembl; ENSMUST00000102976; ENSMUSP00000100041; ENSMUSG00000015619.
GeneID; 14462; -.
KEGG; mmu:14462; -.
UCSC; uc008ihf.1; mouse.
CTD; 2625; -.
MGI; MGI:95663; Gata3.
eggNOG; KOG1601; Eukaryota.
eggNOG; COG5641; LUCA.
GeneTree; ENSGT00760000119221; -.
HOGENOM; HOG000047701; -.
HOVERGEN; HBG051705; -.
InParanoid; P23772; -.
KO; K17895; -.
OMA; QRYPPTH; -.
OrthoDB; EOG091G0AUR; -.
PhylomeDB; P23772; -.
TreeFam; TF315391; -.
Reactome; R-MMU-5689880; Ub-specific processing proteases.
Reactome; R-MMU-8939236; RUNX1 regulates transcription of genes involved in differentiation of HSCs.
Reactome; R-MMU-983231; Factors involved in megakaryocyte development and platelet production.
EvolutionaryTrace; P23772; -.
PRO; PR:P23772; -.
Proteomes; UP000000589; Chromosome 2.
Bgee; ENSMUSG00000015619; -.
CleanEx; MM_GATA3; -.
ExpressionAtlas; P23772; baseline and differential.
Genevisible; P23772; MM.
GO; GO:0000790; C:nuclear chromatin; ISO:MGI.
GO; GO:0005654; C:nucleoplasm; ISO:MGI.
GO; GO:0005634; C:nucleus; IDA:UniProtKB.
GO; GO:0005667; C:transcription factor complex; IBA:GO_Central.
GO; GO:0003682; F:chromatin binding; IBA:GO_Central.
GO; GO:0000987; F:core promoter proximal region sequence-specific DNA binding; ISS:UniProtKB.
GO; GO:0001046; F:core promoter sequence-specific DNA binding; ISO:MGI.
GO; GO:0070888; F:E-box binding; ISS:UniProtKB.
GO; GO:0001158; F:enhancer sequence-specific DNA binding; IDA:UniProtKB.
GO; GO:0071837; F:HMG box domain binding; ISO:MGI.
GO; GO:0005134; F:interleukin-2 receptor binding; IPI:MGI.
GO; GO:0046983; F:protein dimerization activity; IDA:MGI.
GO; GO:0000979; F:RNA polymerase II core promoter sequence-specific DNA binding; IDA:MGI.
GO; GO:0000977; F:RNA polymerase II regulatory region sequence-specific DNA binding; IDA:MGI.
GO; GO:0001085; F:RNA polymerase II transcription factor binding; IBA:GO_Central.
GO; GO:0043565; F:sequence-specific DNA binding; IDA:MGI.
GO; GO:0003713; F:transcription coactivator activity; IDA:MGI.
GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IDA:UniProtKB.
GO; GO:0008134; F:transcription factor binding; ISO:MGI.
GO; GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO; GO:0000976; F:transcription regulatory region sequence-specific DNA binding; ISO:MGI.
GO; GO:0001077; F:transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding; IDA:MGI.
GO; GO:0001078; F:transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding; ISS:UniProtKB.
GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
GO; GO:0048646; P:anatomical structure formation involved in morphogenesis; IMP:MGI.
GO; GO:0003180; P:aortic valve morphogenesis; IMP:UniProtKB.
GO; GO:0007411; P:axon guidance; IMP:MGI.
GO; GO:0061290; P:canonical Wnt signaling pathway involved in metanephric kidney development; IMP:UniProtKB.
GO; GO:0003215; P:cardiac right ventricle morphogenesis; IMP:UniProtKB.
GO; GO:0001775; P:cell activation; IMP:MGI.
GO; GO:0001709; P:cell fate determination; IDA:MGI.
GO; GO:0048469; P:cell maturation; IMP:MGI.
GO; GO:0000902; P:cell morphogenesis; IMP:MGI.
GO; GO:0071773; P:cellular response to BMP stimulus; IDA:MGI.
GO; GO:0071345; P:cellular response to cytokine stimulus; IDA:MGI.
GO; GO:0035457; P:cellular response to interferon-alpha; IEA:Ensembl.
GO; GO:0071353; P:cellular response to interleukin-4; IDA:MGI.
GO; GO:0071356; P:cellular response to tumor necrosis factor; IEA:Ensembl.
GO; GO:0006338; P:chromatin remodeling; IDA:MGI.
GO; GO:0090102; P:cochlea development; IEA:Ensembl.
GO; GO:0048589; P:developmental growth; IMP:MGI.
GO; GO:0043583; P:ear development; ISS:UniProtKB.
GO; GO:0035162; P:embryonic hemopoiesis; IMP:MGI.
GO; GO:0048568; P:embryonic organ development; IMP:MGI.
GO; GO:0030218; P:erythrocyte differentiation; IDA:MGI.
GO; GO:0048872; P:homeostasis of number of cells; IMP:MGI.
GO; GO:0006959; P:humoral immune response; IMP:MGI.
GO; GO:0001701; P:in utero embryonic development; IMP:MGI.
GO; GO:0045087; P:innate immune response; IEA:UniProtKB-KW.
GO; GO:0042472; P:inner ear morphogenesis; IMP:MGI.
GO; GO:0072643; P:interferon-gamma secretion; IMP:MGI.
GO; GO:0072602; P:interleukin-4 secretion; IMP:MGI.
GO; GO:0001822; P:kidney development; ISO:MGI.
GO; GO:0002088; P:lens development in camera-type eye; IMP:MGI.
GO; GO:0072676; P:lymphocyte migration; ISS:UniProtKB.
GO; GO:0008584; P:male gonad development; IMP:UniProtKB.
GO; GO:0060374; P:mast cell differentiation; IDA:MGI.
GO; GO:0060231; P:mesenchymal to epithelial transition; ISS:UniProtKB.
GO; GO:0001823; P:mesonephros development; IMP:MGI.
GO; GO:0045786; P:negative regulation of cell cycle; IMP:MGI.
GO; GO:2000146; P:negative regulation of cell motility; ISS:UniProtKB.
GO; GO:0008285; P:negative regulation of cell proliferation; IMP:MGI.
GO; GO:2000607; P:negative regulation of cell proliferation involved in mesonephros development; IMP:UniProtKB.
GO; GO:1901536; P:negative regulation of DNA demethylation; IDA:MGI.
GO; GO:2000352; P:negative regulation of endothelial cell apoptotic process; ISS:UniProtKB.
GO; GO:0045599; P:negative regulation of fat cell differentiation; ISS:UniProtKB.
GO; GO:2000703; P:negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation; IMP:UniProtKB.
GO; GO:0010629; P:negative regulation of gene expression; IMP:MGI.
GO; GO:2000734; P:negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation; IMP:UniProtKB.
GO; GO:0050728; P:negative regulation of inflammatory response; ISS:UniProtKB.
GO; GO:0032689; P:negative regulation of interferon-gamma production; IDA:MGI.
GO; GO:0032703; P:negative regulation of interleukin-2 production; IDA:MGI.
GO; GO:0033600; P:negative regulation of mammary gland epithelial cell proliferation; ISO:MGI.
GO; GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.
GO; GO:0045892; P:negative regulation of transcription, DNA-templated; ISS:UniProtKB.
GO; GO:0072179; P:nephric duct formation; IMP:UniProtKB.
GO; GO:0072178; P:nephric duct morphogenesis; IMP:UniProtKB.
GO; GO:0007399; P:nervous system development; IMP:MGI.
GO; GO:0030182; P:neuron differentiation; IMP:MGI.
GO; GO:0001764; P:neuron migration; IMP:MGI.
GO; GO:0042421; P:norepinephrine biosynthetic process; IMP:MGI.
GO; GO:0071599; P:otic vesicle development; IMP:MGI.
GO; GO:0060017; P:parathyroid gland development; IMP:MGI.
GO; GO:0035898; P:parathyroid hormone secretion; IMP:MGI.
GO; GO:0060037; P:pharyngeal system development; IMP:UniProtKB.
GO; GO:0014065; P:phosphatidylinositol 3-kinase signaling; IMP:UniProtKB.
GO; GO:0045597; P:positive regulation of cell differentiation; IMP:MGI.
GO; GO:0001819; P:positive regulation of cytokine production; IDA:MGI.
GO; GO:0010595; P:positive regulation of endothelial cell migration; ISS:UniProtKB.
GO; GO:0010628; P:positive regulation of gene expression; IGI:MGI.
GO; GO:0071442; P:positive regulation of histone H3-K14 acetylation; IDA:MGI.
GO; GO:2000617; P:positive regulation of histone H3-K9 acetylation; IDA:MGI.
GO; GO:0032736; P:positive regulation of interleukin-13 production; IMP:MGI.
GO; GO:2000667; P:positive regulation of interleukin-13 secretion; ISS:UniProtKB.
GO; GO:0032753; P:positive regulation of interleukin-4 production; IDA:MGI.
GO; GO:0032754; P:positive regulation of interleukin-5 production; IMP:MGI.
GO; GO:2000664; P:positive regulation of interleukin-5 secretion; ISS:UniProtKB.
GO; GO:0051897; P:positive regulation of protein kinase B signaling; ISS:UniProtKB.
GO; GO:0009967; P:positive regulation of signal transduction; ISS:UniProtKB.
GO; GO:0045582; P:positive regulation of T cell differentiation; IDA:UniProtKB.
GO; GO:2000553; P:positive regulation of T-helper 2 cell cytokine production; IMP:MGI.
GO; GO:2000611; P:positive regulation of thyroid hormone generation; ISS:UniProtKB.
GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.
GO; GO:2000679; P:positive regulation of transcription regulatory region DNA binding; IMP:UniProtKB.
GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:UniProtKB.
GO; GO:0072107; P:positive regulation of ureteric bud formation; IMP:UniProtKB.
GO; GO:0009791; P:post-embryonic development; IMP:MGI.
GO; GO:0002572; P:pro-T cell differentiation; IMP:MGI.
GO; GO:0043370; P:regulation of CD4-positive, alpha-beta T cell differentiation; IMP:MGI.
GO; GO:2000683; P:regulation of cellular response to X-ray; ISS:UniProtKB.
GO; GO:0042035; P:regulation of cytokine biosynthetic process; IDA:MGI.
GO; GO:2000114; P:regulation of establishment of cell polarity; IDA:MGI.
GO; GO:0061085; P:regulation of histone H3-K27 methylation; IDA:MGI.
GO; GO:0051569; P:regulation of histone H3-K4 methylation; IDA:MGI.
GO; GO:0072182; P:regulation of nephron tubule epithelial cell differentiation; IMP:UniProtKB.
GO; GO:0043523; P:regulation of neuron apoptotic process; IMP:MGI.
GO; GO:0010975; P:regulation of neuron projection development; IMP:MGI.
GO; GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:MGI.
GO; GO:0072001; P:renal system development; IGI:MGI.
GO; GO:0042493; P:response to drug; IEA:Ensembl.
GO; GO:0043627; P:response to estrogen; IEA:Ensembl.
GO; GO:0045471; P:response to ethanol; IEA:Ensembl.
GO; GO:0010332; P:response to gamma radiation; IEA:Ensembl.
GO; GO:0009615; P:response to virus; IEA:Ensembl.
GO; GO:0007165; P:signal transduction; IMP:UniProtKB.
GO; GO:0048485; P:sympathetic nervous system development; IMP:MGI.
GO; GO:0030217; P:T cell differentiation; IDA:MGI.
GO; GO:0033077; P:T cell differentiation in thymus; IMP:MGI.
GO; GO:0050852; P:T cell receptor signaling pathway; IDA:UniProtKB.
GO; GO:0045064; P:T-helper 2 cell differentiation; IDA:MGI.
GO; GO:0045061; P:thymic T cell selection; IMP:MGI.
GO; GO:0048538; P:thymus development; IMP:MGI.
GO; GO:0031929; P:TOR signaling; IMP:UniProtKB.
GO; GO:0001806; P:type IV hypersensitivity; IEA:Ensembl.
GO; GO:0035799; P:ureter maturation; IMP:MGI.
GO; GO:0060676; P:ureteric bud formation; IMP:UniProtKB.
GO; GO:0060065; P:uterus development; IMP:UniProtKB.
GO; GO:0003281; P:ventricular septum development; IMP:UniProtKB.
Gene3D; 3.30.50.10; -; 2.
InterPro; IPR029521; GATA-3.
InterPro; IPR016374; TF_GATA-2/3.
InterPro; IPR000679; Znf_GATA.
InterPro; IPR013088; Znf_NHR/GATA.
PANTHER; PTHR10071:SF106; PTHR10071:SF106; 1.
Pfam; PF00320; GATA; 2.
PIRSF; PIRSF003027; TF_GATA-1/2/3; 1.
PRINTS; PR00619; GATAZNFINGER.
SMART; SM00401; ZnF_GATA; 2.
PROSITE; PS00344; GATA_ZN_FINGER_1; 2.
PROSITE; PS50114; GATA_ZN_FINGER_2; 2.
1: Evidence at protein level;
3D-structure; Activator; Complete proteome; DNA-binding; Immunity;
Innate immunity; Metal-binding; Nucleus; Phosphoprotein;
Reference proteome; Repeat; Transcription; Transcription regulation;
Zinc; Zinc-finger.
CHAIN 1 443 Trans-acting T-cell-specific
transcription factor GATA-3.
/FTId=PRO_0000083409.
ZN_FING 263 287 GATA-type 1. {ECO:0000255|PROSITE-
ProRule:PRU00094}.
ZN_FING 317 341 GATA-type 2. {ECO:0000255|PROSITE-
ProRule:PRU00094}.
REGION 1 257 Interaction with TBX21.
{ECO:0000269|PubMed:15662016}.
REGION 288 316 Flexible linker. {ECO:0000250}.
MOTIF 344 353 YxKxHxxxRP.
COMPBIAS 136 139 Poly-Ser.
COMPBIAS 322 326 Poly-Thr.
MOD_RES 114 114 Phosphoserine.
{ECO:0000250|UniProtKB:P23771}.
MOD_RES 161 161 Phosphoserine.
{ECO:0000244|PubMed:21183079}.
MUTAGEN 344 344 Y->A: Dramatically decreased Th2 cell
differentiation.
{ECO:0000269|PubMed:17056504}.
MUTAGEN 346 346 K->A: Moderately decreased Th2 cell
differentiation.
{ECO:0000269|PubMed:17056504}.
MUTAGEN 348 348 H->A: Dramatically decreased Th2 cell
differentiation.
{ECO:0000269|PubMed:17056504}.
MUTAGEN 352 352 R->A: Fails to induce Th2 cytokine
production.
{ECO:0000269|PubMed:17056504}.
MUTAGEN 353 353 P->A,K: Fails to induce Th2 cytokine
production.
{ECO:0000269|PubMed:17056504}.
TURN 318 320 {ECO:0000244|PDB:3DFX}.
STRAND 326 330 {ECO:0000244|PDB:3DFV}.
STRAND 336 338 {ECO:0000244|PDB:3DFV}.
HELIX 339 348 {ECO:0000244|PDB:3DFX}.
HELIX 354 356 {ECO:0000244|PDB:3DFX}.
SEQUENCE 443 AA; 47968 MW; 980E58FB9872E560 CRC64;
MEVTADQPRW VSHHHPAVLN GQHPDTHHPG LGHSYMEAQY PLTEEVDVLF NIDGQGNHVP
SYYGNSVRAT VQRYPPTHHG SQVCRPPLLH GSLPWLDGGK ALSSHHTASP WNLSPFSKTS
IHHGSPGPLS VYPPASSSSL AAGHSSPHLF TFPPTPPKDV SPDPSLSTPG SAGSARQDEK
ECLKYQVQLP DSMKLETSHS RGSMTTLGGA SSSAHHPITT YPPYVPEYSS GLFPPSSLLG
GSPTGFGCKS RPKARSSTEG RECVNCGATS TPLWRRDGTG HYLCNACGLY HKMNGQNRPL
IKPKRRLSAA RRAGTSCANC QTTTTTLWRR NANGDPVCNA CGLYYKLHNI NRPLTMKKEG
IQTRNRKMSS KSKKCKKVHD ALEDFPKSSS FNPAALSRHM SSLSHISPFS HSSHMLTTPT
PMHPPSGLSF GPHHPSSMVT AMG


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