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Transcription factor GATA-4 (GATA-binding factor 4)

 GATA4_MOUSE             Reviewed;         441 AA.
Q08369; B9EHF7; P97491; Q9QZK4;
01-OCT-1994, integrated into UniProtKB/Swiss-Prot.
19-MAR-2014, sequence version 4.
10-MAY-2017, entry version 158.
RecName: Full=Transcription factor GATA-4;
AltName: Full=GATA-binding factor 4;
Name=Gata4; Synonyms=Gata-4;
Mus musculus (Mouse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
NCBI_TaxID=10090;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=8455608; DOI=10.1128/MCB.13.4.2235;
Arceci R.J., King A.A., Simon M.C., Orkin S.H., Wilson D.B.;
"Mouse GATA-4: a retinoic acid-inducible GATA-binding transcription
factor expressed in endodermally derived tissues and heart.";
Mol. Cell. Biol. 13:2235-2246(1993).
[2]
IDENTIFICATION OF PROBABLE FRAMESHIFTS.
PubMed=8083222;
Laverriere A.C., Macneill C., Mueller C., Poelmann R.E., Burch J.B.E.,
Evans T.;
"GATA-4/5/6, a subfamily of three transcription factors transcribed in
developing heart and gut.";
J. Biol. Chem. 269:23177-23184(1994).
[3]
NUCLEOTIDE SEQUENCE [MRNA].
Morrisey E.E., Parmacek M.S.;
"Murine GATA-4 is expressed in heart and gut tissues.";
Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=C57BL/6 X DBA/2; TISSUE=Heart;
Katsuoka F., Motohashi H., Yamamoto M.;
Submitted (AUG-1999) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=C57BL/6J;
PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S.,
She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W.,
Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T.,
Zhou S., Teague B., Potamousis K., Churas C., Place M., Herschleb J.,
Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z.,
Lindblad-Toh K., Eichler E.E., Ponting C.P.;
"Lineage-specific biology revealed by a finished genome assembly of
the mouse.";
PLoS Biol. 7:E1000112-E1000112(2009).
[6]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.;
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
[7]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Brain;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[8]
CHARACTERIZATION.
PubMed=7717974; DOI=10.1042/bj3070183;
Bielinska M., Wilson D.B.;
"Regulation of J6 gene expression by transcription factor GATA-4.";
Biochem. J. 307:183-189(1995).
[9]
INTERACTION WITH NFATC4.
PubMed=9568714; DOI=10.1016/S0092-8674(00)81573-1;
Molkentin J.D., Lu J.-R., Antos C.L., Markham B., Richardson J.,
Robbins J., Grant S.R., Olson E.N.;
"A calcineurin-dependent transcriptional pathway for cardiac
hypertrophy.";
Cell 93:215-228(1998).
[10]
FUNCTION, AND INTERACTION WITH NKX2-5.
PubMed=9584153; DOI=10.1128/MCB.18.6.3120;
Lee Y., Shioi T., Kasahara H., Jobe S.M., Wiese R.J., Markham B.E.,
Izumo S.;
"The cardiac tissue-restricted homeobox protein Csx/Nkx2.5 physically
associates with the zinc finger protein GATA4 and cooperatively
activates atrial natriuretic factor gene expression.";
Mol. Cell. Biol. 18:3120-3129(1998).
[11]
INTERACTION WITH JARID2.
PubMed=15542826; DOI=10.1128/MCB.24.23.10151-10160.2004;
Kim T.-G., Chen J., Sadoshima J., Lee Y.;
"Jumonji represses atrial natriuretic factor gene expression by
inhibiting transcriptional activities of cardiac transcription
factors.";
Mol. Cell. Biol. 24:10151-10160(2004).
[12]
INTERACTION WITH LMCD1.
PubMed=16199866; DOI=10.1128/MCB.25.20.8864-8873.2005;
Rath N., Wang Z., Lu M.M., Morrisey E.E.;
"LMCD1/Dyxin is a novel transcriptional cofactor that restricts GATA6
function by inhibiting DNA binding.";
Mol. Cell. Biol. 25:8864-8873(2005).
[13]
INTERACTION WITH TBX18.
PubMed=17584735; DOI=10.1074/jbc.M703724200;
Farin H.F., Bussen M., Schmidt M.K., Singh M.K., Schuster-Gossler K.,
Kispert A.;
"Transcriptional repression by the T-box proteins Tbx18 and Tbx15
depends on Groucho corepressors.";
J. Biol. Chem. 282:25748-25759(2007).
[14]
METHYLATION AT LYS-299.
PubMed=22215809; DOI=10.1101/gad.173930.111;
He A., Shen X., Ma Q., Cao J., von Gise A., Zhou P., Wang G.,
Marquez V.E., Orkin S.H., Pu W.T.;
"PRC2 directly methylates GATA4 and represses its transcriptional
activity.";
Genes Dev. 26:37-42(2012).
-!- FUNCTION: Transcriptional activator that binds to the consensus
sequence 5'-AGATAG-3' and plays a key role in cardiac development
(By similarity). In cooperation with TBX5, it binds to cardiac
super-enhancers and promotes cardiomyocyte gene expression, while
it downregulates endocardial and endothelial gene expression (By
similarity). Involved in bone morphogenetic protein (BMP)-mediated
induction of cardiac-specific gene expression (By similarity).
Binds to BMP response element (BMPRE) DNA sequences within cardiac
activating regions (By similarity). Acts as a transcriptional
activator of ANF in cooperation with NKX2-5 (PubMed:9584153).
Promotes cardiac myocyte enlargement (By similarity). Required
during testicular development (By similarity). May play a role in
sphingolipid signaling by regulating the expression of
sphingosine-1-phosphate degrading enzyme, spingosine-1-phosphate
lyase (By similarity). {ECO:0000250|UniProtKB:P43694,
ECO:0000250|UniProtKB:P46152, ECO:0000269|PubMed:9584153}.
-!- SUBUNIT: Interacts with ZNF260 (By similarity). Interacts with the
homeobox domain of NKX2-5 through its C-terminal zinc finger. Also
interacts with JARID2 which represses its ability to activate
transcription of ANF. Interacts with NFATC4 and LMCD1. Forms a
complex made of CDK9, CCNT1/cyclin-T1, EP300 and GATA4 that
stimulates hypertrophy in cardiomyocytes. Interacts with NR5A1,
ZFPM2 and TBX5. Interacts with TBX18.
{ECO:0000250|UniProtKB:P43694, ECO:0000269|PubMed:15542826,
ECO:0000269|PubMed:16199866, ECO:0000269|PubMed:17584735,
ECO:0000269|PubMed:9568714, ECO:0000269|PubMed:9584153}.
-!- INTERACTION:
Q62315:Jarid2; NbExp=3; IntAct=EBI-297008, EBI-493592;
P42582:Nkx2-5; NbExp=4; IntAct=EBI-297008, EBI-297021;
Q99593:TBX5 (xeno); NbExp=2; IntAct=EBI-297008, EBI-297043;
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:P43694}.
-!- TISSUE SPECIFICITY: Heart, intestine, liver, primative endoderm
and gonads.
-!- INDUCTION: By retinoic acid.
-!- PTM: Methylation at Lys-299 attenuates transcriptional activity.
{ECO:0000269|PubMed:22215809}.
-!- SEQUENCE CAUTION:
Sequence=AAA37662.1; Type=Frameshift; Positions=6, 40, 69; Evidence={ECO:0000305};
-----------------------------------------------------------------------
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EMBL; M98339; AAA37662.1; ALT_FRAME; mRNA.
EMBL; U85046; AAB42015.1; -; mRNA.
EMBL; AF179424; AAD55266.1; -; mRNA.
EMBL; AC090654; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AC090962; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; CH466535; EDL36067.1; -; Genomic_DNA.
EMBL; BC137824; AAI37825.1; -; mRNA.
CCDS; CCDS49519.1; -.
PIR; A48099; A48099.
RefSeq; NP_032118.2; NM_008092.4.
UniGene; Mm.247669; -.
ProteinModelPortal; Q08369; -.
SMR; Q08369; -.
BioGrid; 199841; 18.
DIP; DIP-33032N; -.
IntAct; Q08369; 3.
MINT; MINT-206005; -.
STRING; 10090.ENSMUSP00000113891; -.
ChEMBL; CHEMBL1687680; -.
iPTMnet; Q08369; -.
PhosphoSitePlus; Q08369; -.
MaxQB; Q08369; -.
PaxDb; Q08369; -.
PRIDE; Q08369; -.
Ensembl; ENSMUST00000118022; ENSMUSP00000113891; ENSMUSG00000021944.
GeneID; 14463; -.
KEGG; mmu:14463; -.
UCSC; uc007uhn.1; mouse.
CTD; 2626; -.
MGI; MGI:95664; Gata4.
eggNOG; KOG1601; Eukaryota.
eggNOG; COG5641; LUCA.
GeneTree; ENSGT00760000119221; -.
HOGENOM; HOG000047700; -.
HOVERGEN; HBG051703; -.
InParanoid; Q08369; -.
KO; K09183; -.
PhylomeDB; Q08369; -.
Reactome; R-MMU-983231; Factors involved in megakaryocyte development and platelet production.
PRO; PR:Q08369; -.
Proteomes; UP000000589; Chromosome 14.
Bgee; ENSMUSG00000021944; -.
CleanEx; MM_GATA4; -.
ExpressionAtlas; Q08369; baseline and differential.
Genevisible; Q08369; MM.
GO; GO:0016604; C:nuclear body; ISO:MGI.
GO; GO:0000790; C:nuclear chromatin; IDA:BHF-UCL.
GO; GO:0005634; C:nucleus; IDA:BHF-UCL.
GO; GO:0090575; C:RNA polymerase II transcription factor complex; ISO:MGI.
GO; GO:0005667; C:transcription factor complex; IBA:GO_Central.
GO; GO:0003682; F:chromatin binding; IDA:MGI.
GO; GO:0070410; F:co-SMAD binding; ISO:MGI.
GO; GO:0003677; F:DNA binding; IDA:MGI.
GO; GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; IDA:BHF-UCL.
GO; GO:0000977; F:RNA polymerase II regulatory region sequence-specific DNA binding; IDA:MGI.
GO; GO:0000981; F:RNA polymerase II transcription factor activity, sequence-specific DNA binding; IDA:BHF-UCL.
GO; GO:0001085; F:RNA polymerase II transcription factor binding; IBA:GO_Central.
GO; GO:0043565; F:sequence-specific DNA binding; IDA:MGI.
GO; GO:0003713; F:transcription coactivator activity; ISO:MGI.
GO; GO:0003705; F:transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding; IDA:BHF-UCL.
GO; GO:0001076; F:transcription factor activity, RNA polymerase II transcription factor binding; IDA:UniProtKB.
GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IDA:MGI.
GO; GO:0008134; F:transcription factor binding; ISO:MGI.
GO; GO:0044212; F:transcription regulatory region DNA binding; ISO:MGI.
GO; GO:0001228; F:transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding; IBA:GO_Central.
GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
GO; GO:0060413; P:atrial septum morphogenesis; ISO:MGI.
GO; GO:0003289; P:atrial septum primum morphogenesis; IMP:BHF-UCL.
GO; GO:0003290; P:atrial septum secundum morphogenesis; ISO:MGI.
GO; GO:0036302; P:atrioventricular canal development; IGI:BHF-UCL.
GO; GO:0003190; P:atrioventricular valve formation; IGI:BHF-UCL.
GO; GO:0003181; P:atrioventricular valve morphogenesis; IGI:MGI.
GO; GO:0030509; P:BMP signaling pathway; IDA:MGI.
GO; GO:0060070; P:canonical Wnt signaling pathway; IDA:MGI.
GO; GO:0055007; P:cardiac muscle cell differentiation; IMP:MGI.
GO; GO:0014898; P:cardiac muscle hypertrophy in response to stress; IMP:MGI.
GO; GO:0048738; P:cardiac muscle tissue development; IGI:MGI.
GO; GO:0061026; P:cardiac muscle tissue regeneration; IDA:BHF-UCL.
GO; GO:0003215; P:cardiac right ventricle morphogenesis; IMP:BHF-UCL.
GO; GO:0003279; P:cardiac septum development; IGI:BHF-UCL.
GO; GO:0007267; P:cell-cell signaling; IMP:MGI.
GO; GO:0071372; P:cellular response to follicle-stimulating hormone stimulus; IDA:MGI.
GO; GO:0071371; P:cellular response to gonadotropin stimulus; IDA:MGI.
GO; GO:0060540; P:diaphragm morphogenesis; TAS:BHF-UCL.
GO; GO:0048557; P:embryonic digestive tract morphogenesis; IMP:MGI.
GO; GO:0048617; P:embryonic foregut morphogenesis; IMP:MGI.
GO; GO:0035054; P:embryonic heart tube anterior/posterior pattern specification; IMP:MGI.
GO; GO:0035050; P:embryonic heart tube development; IMP:MGI.
GO; GO:0048598; P:embryonic morphogenesis; IMP:MGI.
GO; GO:0003197; P:endocardial cushion development; IMP:BHF-UCL.
GO; GO:0001706; P:endoderm formation; IMP:MGI.
GO; GO:0072148; P:epithelial cell fate commitment; IMP:MGI.
GO; GO:0001702; P:gastrulation with mouth forming second; IMP:MGI.
GO; GO:0007507; P:heart development; IMP:MGI.
GO; GO:0001947; P:heart looping; IMP:BHF-UCL.
GO; GO:0003007; P:heart morphogenesis; IMP:BHF-UCL.
GO; GO:0001701; P:in utero embryonic development; IMP:MGI.
GO; GO:0060575; P:intestinal epithelial cell differentiation; ISO:MGI.
GO; GO:0060464; P:lung lobe formation; IMP:MGI.
GO; GO:0060425; P:lung morphogenesis; TAS:BHF-UCL.
GO; GO:0008584; P:male gonad development; ISO:MGI.
GO; GO:0003192; P:mitral valve formation; TAS:BHF-UCL.
GO; GO:2001234; P:negative regulation of apoptotic signaling pathway; IDA:BHF-UCL.
GO; GO:0010667; P:negative regulation of cardiac muscle cell apoptotic process; IGI:BHF-UCL.
GO; GO:1905204; P:negative regulation of connective tissue replacement; IDA:BHF-UCL.
GO; GO:0010629; P:negative regulation of gene expression; IDA:BHF-UCL.
GO; GO:1903202; P:negative regulation of oxidative stress-induced cell death; IDA:BHF-UCL.
GO; GO:0003151; P:outflow tract morphogenesis; TAS:BHF-UCL.
GO; GO:0045766; P:positive regulation of angiogenesis; IDA:BHF-UCL.
GO; GO:0060045; P:positive regulation of cardiac muscle cell proliferation; IGI:MGI.
GO; GO:0051891; P:positive regulation of cardioblast differentiation; IEP:BHF-UCL.
GO; GO:0070374; P:positive regulation of ERK1 and ERK2 cascade; IDA:BHF-UCL.
GO; GO:0010628; P:positive regulation of gene expression; IDA:BHF-UCL.
GO; GO:0001934; P:positive regulation of protein phosphorylation; IDA:BHF-UCL.
GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.
GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:UniProtKB.
GO; GO:0010575; P:positive regulation of vascular endothelial growth factor production; IDA:BHF-UCL.
GO; GO:0060043; P:regulation of cardiac muscle cell proliferation; IMP:MGI.
GO; GO:0010468; P:regulation of gene expression; IDA:MGI.
GO; GO:0051896; P:regulation of protein kinase B signaling; IDA:BHF-UCL.
GO; GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:MGI.
GO; GO:0006355; P:regulation of transcription, DNA-templated; IDA:MGI.
GO; GO:0042493; P:response to drug; ISO:MGI.
GO; GO:0043627; P:response to estrogen; IDA:MGI.
GO; GO:0032526; P:response to retinoic acid; IDA:BHF-UCL.
GO; GO:0072520; P:seminiferous tubule development; IMP:MGI.
GO; GO:0060008; P:Sertoli cell differentiation; IMP:MGI.
GO; GO:0023019; P:signal transduction involved in regulation of gene expression; IDA:MGI.
GO; GO:0035914; P:skeletal muscle cell differentiation; NAS:UniProtKB.
GO; GO:0060395; P:SMAD protein signal transduction; IDA:MGI.
GO; GO:0007283; P:spermatogenesis; IMP:MGI.
GO; GO:0006366; P:transcription from RNA polymerase II promoter; IDA:BHF-UCL.
GO; GO:0003195; P:tricuspid valve formation; TAS:BHF-UCL.
GO; GO:0035239; P:tube morphogenesis; IGI:MGI.
GO; GO:0060979; P:vasculogenesis involved in coronary vascular morphogenesis; TAS:DFLAT.
GO; GO:0003229; P:ventricular cardiac muscle tissue development; IGI:MGI.
GO; GO:0003281; P:ventricular septum development; IMP:BHF-UCL.
Gene3D; 3.30.50.10; -; 1.
InterPro; IPR008013; GATA_N.
InterPro; IPR016375; TF_GATA_4/5/6.
InterPro; IPR000679; Znf_GATA.
InterPro; IPR013088; Znf_NHR/GATA.
Pfam; PF00320; GATA; 2.
Pfam; PF05349; GATA-N; 1.
PIRSF; PIRSF003028; TF_GATA_4/5/6; 1.
PRINTS; PR00619; GATAZNFINGER.
SMART; SM00401; ZnF_GATA; 2.
PROSITE; PS00344; GATA_ZN_FINGER_1; 2.
PROSITE; PS50114; GATA_ZN_FINGER_2; 2.
1: Evidence at protein level;
Activator; Complete proteome; DNA-binding; Metal-binding; Methylation;
Nucleus; Reference proteome; Repeat; Transcription;
Transcription regulation; Zinc; Zinc-finger.
CHAIN 1 441 Transcription factor GATA-4.
/FTId=PRO_0000083414.
ZN_FING 216 240 GATA-type 1. {ECO:0000255|PROSITE-
ProRule:PRU00094}.
ZN_FING 270 294 GATA-type 2. {ECO:0000255|PROSITE-
ProRule:PRU00094}.
COMPBIAS 118 126 Poly-Ala.
COMPBIAS 174 181 Poly-Ala.
COMPBIAS 275 279 Poly-Thr.
COMPBIAS 354 359 Poly-Ser.
MOD_RES 299 299 N6-methyllysine; by EZH2.
{ECO:0000269|PubMed:22215809}.
CONFLICT 385 402 FSTVSGHGPSIHPVLSAL -> SVCVRPRALHPSSAVCS
(in Ref. 1; AAA37662 and 3; AAB42015).
{ECO:0000305}.
SEQUENCE 441 AA; 44580 MW; E9521771741DD08E CRC64;
MYQSLAMAAN HGPPPGAYEA GGPGAFMHSA GAASSPVYVP TPRVPSSVLG LSYLQGGGSA
AAAGTTSGGS SGAGPSGAGP GTQQGSPGWS QAGAEGAAYT PPPVSPRFSF PGTTGSLAAA
AAAAAAREAA AYGSGGGAAG AGLAGREQYG RPGFAGSYSS PYPAYMADVG ASWAAAAAAS
AGPFDSPVLH SLPGRANPGR HPNLDMFDDF SEGRECVNCG AMSTPLWRRD GTGHYLCNAC
GLYHKMNGIN RPLIKPQRRL SASRRVGLSC ANCQTTTTTL WRRNAEGEPV CNACGLYMKL
HGVPRPLAMR KEGIQTRKRK PKNLNKSKTP AGPAGETLPP SSGASSGNSS NATSSSSSSE
EMRPIKTEPG LSSHYGHSSS MSQTFSTVSG HGPSIHPVLS ALKLSPQGYA SPVTQTSQAS
SKQDSWNSLV LADSHGDIIT A


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