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Transcription factor Lmx1b (Fragment)

 Q5CD70_DANRE            Unreviewed;       119 AA.
Q5CD70;
12-APR-2005, integrated into UniProtKB/TrEMBL.
12-APR-2005, sequence version 1.
31-JAN-2018, entry version 51.
SubName: Full=Transcription factor Lmx1b {ECO:0000313|EMBL:BAD91092.1};
Flags: Fragment;
Name=lmx1bb {ECO:0000313|ZFIN:ZDB-GENE-050114-2};
Synonyms=lmx1b {ECO:0000313|EMBL:BAD91092.1},
lmx1b.1 {ECO:0000313|ZFIN:ZDB-GENE-050114-2};
Danio rerio (Zebrafish) (Brachydanio rerio).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
Cyprinidae; Danio.
NCBI_TaxID=7955 {ECO:0000313|EMBL:BAD91092.1};
[1] {ECO:0000313|EMBL:BAD91092.1}
NUCLEOTIDE SEQUENCE.
TISSUE=Whole embryo {ECO:0000313|EMBL:BAD91092.1};
Uemura O., Okada Y., Ando H., Higashijima S., Shimazaki T., Chino N.,
Okano H., Okamoto H.;
"Evolutionary origin of subtype specification of motor neurons
revealed by two conserved enhancers of the isl1 gene.";
Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases.
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EMBL; AB159648; BAD91092.1; -; mRNA.
UniGene; Dr.108678; -.
ProteinModelPortal; Q5CD70; -.
ZFIN; ZDB-GENE-050114-2; lmx1bb.
eggNOG; KOG0490; Eukaryota.
eggNOG; ENOG410YIJ3; LUCA.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0060117; P:auditory receptor cell development; IMP:ZFIN.
GO; GO:0061386; P:closure of optic fissure; IGI:ZFIN.
GO; GO:0021592; P:fourth ventricle development; IGI:ZFIN.
GO; GO:0072015; P:glomerular visceral epithelial cell development; IMP:ZFIN.
GO; GO:1905962; P:glutamatergic neuron differentiation; IMP:ZFIN.
GO; GO:0042472; P:inner ear morphogenesis; IMP:ZFIN.
GO; GO:0030917; P:midbrain-hindbrain boundary development; IGI:ZFIN.
GO; GO:0002072; P:optic cup morphogenesis involved in camera-type eye development; IGI:ZFIN.
GO; GO:0032474; P:otolith morphogenesis; IMP:ZFIN.
GO; GO:0035775; P:pronephric glomerulus morphogenesis; IGI:ZFIN.
GO; GO:0060041; P:retina development in camera-type eye; IGI:ZFIN.
GO; GO:0048752; P:semicircular canal morphogenesis; IMP:ZFIN.
InterPro; IPR001781; Znf_LIM.
Pfam; PF00412; LIM; 1.
SMART; SM00132; LIM; 1.
PROSITE; PS50023; LIM_DOMAIN_2; 1.
2: Evidence at transcript level;
LIM domain {ECO:0000256|PROSITE-ProRule:PRU00125,
ECO:0000256|SAAS:SAAS00113461};
Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125,
ECO:0000256|SAAS:SAAS00113461};
Zinc {ECO:0000256|PROSITE-ProRule:PRU00125,
ECO:0000256|SAAS:SAAS00113461}.
DOMAIN 1 58 LIM zinc-binding.
{ECO:0000259|PROSITE:PS50023}.
NON_TER 1 1 {ECO:0000313|EMBL:BAD91092.1}.
NON_TER 119 119 {ECO:0000313|EMBL:BAD91092.1}.
SEQUENCE 119 AA; 13538 MW; 3B8082A9C86F6637 CRC64;
CMEKIAPTEF VMRALECVYH LNCFCCCVCD RQQRKGDEFV LKDGQLXCKS DYEREKDLLG
SVSPDDSDSE KSEDEELDIK PEKGSGGTGK GDDGEDLXDQ ETRYILTHSX DEPSRRRSR


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