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Transcription factor MYB101 (Myb-related protein 101) (AtM1) (AtMYB101) (Protein ABNORMAL SHOOT 7)

 MB101_ARATH             Reviewed;         490 AA.
O80883; A8MSC3; C0Z3H7; Q8W1W5;
15-MAR-2017, integrated into UniProtKB/Swiss-Prot.
01-NOV-1998, sequence version 1.
22-NOV-2017, entry version 153.
RecName: Full=Transcription factor MYB101 {ECO:0000303|PubMed:11597504};
AltName: Full=Myb-related protein 101 {ECO:0000303|PubMed:11597504};
Short=AtM1 {ECO:0000303|PubMed:11597504};
Short=AtMYB101 {ECO:0000303|PubMed:11597504};
AltName: Full=Protein ABNORMAL SHOOT 7 {ECO:0000303|PubMed:25268707};
Name=MYB101 {ECO:0000303|PubMed:11597504};
Synonyms=ABS7 {ECO:0000303|PubMed:25268707};
OrderedLocusNames=At2g32460 {ECO:0000312|Araport:AT2G32460};
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), FUNCTION, TISSUE SPECIFICITY,
AND DEVELOPMENTAL STAGE.
STRAIN=cv. Columbia, and cv. Landsberg erecta;
PubMed=11743113; DOI=10.1104/pp.127.4.1682;
Gocal G.F.W., Sheldon C.C., Gubler F., Moritz T., Bagnall D.J.,
MacMillan C.P., Li S.F., Parish R.W., Dennis E.S., Weigel D.,
King R.W.;
"GAMYB-like genes, flowering, and gibberellin signaling in
Arabidopsis.";
Plant Physiol. 127:1682-1693(2001).
[2]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
Qu L., Gu H.;
"The MYB transcription factor family in Arabidopsis: A genome-wide
cloning and expression pattern analysis.";
Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=10617197; DOI=10.1038/45471;
Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L.,
Moffat K.S., Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L.,
Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H.,
Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D.,
Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M.,
Venter J.C.;
"Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana.";
Nature 402:761-768(1999).
[4]
GENOME REANNOTATION.
STRAIN=cv. Columbia;
The Arabidopsis Information Portal (Araport);
Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3).
STRAIN=cv. Columbia;
PubMed=19423640; DOI=10.1093/dnares/dsp009;
Iida K., Fukami-Kobayashi K., Toyoda A., Sakaki Y., Kobayashi M.,
Seki M., Shinozaki K.;
"Analysis of multiple occurrences of alternative splicing events in
Arabidopsis thaliana using novel sequenced full-length cDNAs.";
DNA Res. 16:155-164(2009).
[6]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
STRAIN=cv. Columbia;
Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
Hayashizaki Y., Shinozaki K.;
"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
[7]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
Quinitio C., Chen H., Kim C.J., Shinn P., Ecker J.R.;
"Arabidopsis ORF Clones.";
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[8]
GENE FAMILY, AND NOMENCLATURE.
STRAIN=cv. Columbia;
PubMed=9839469; DOI=10.1046/j.1365-313x.1998.00278.x;
Kranz H.D., Denekamp M., Greco R., Jin H.-L., Leyva A., Meissner R.C.,
Petroni K., Urzainqui A., Bevan M., Martin C., Smeekens S.,
Tonelli C., Paz-Ares J., Weisshaar B.;
"Towards functional characterisation of the members of the R2R3-MYB
gene family from Arabidopsis thaliana.";
Plant J. 16:263-276(1998).
[9]
GENE FAMILY, AND NOMENCLATURE.
STRAIN=cv. Columbia;
PubMed=11597504; DOI=10.1016/S1369-5266(00)00199-0;
Stracke R., Werber M., Weisshaar B.;
"The R2R3-MYB gene family in Arabidopsis thaliana.";
Curr. Opin. Plant Biol. 4:447-456(2001).
[10]
REPRESSION BY MICRORNA159.
PubMed=15226253; DOI=10.1242/dev.01206;
Achard P., Herr A., Baulcombe D.C., Harberd N.P.;
"Modulation of floral development by a gibberellin-regulated
microRNA.";
Development 131:3357-3365(2004).
[11]
FUNCTION, DISRUPTION PHENOTYPE, AND REPRESSION BY MICRORNA159.
STRAIN=cv. Columbia;
PubMed=17217461; DOI=10.1111/j.1365-313X.2006.02980.x;
Reyes J.L., Chua N.-H.;
"ABA induction of miR159 controls transcript levels of two MYB factors
during Arabidopsis seed germination.";
Plant J. 49:592-606(2007).
[12]
FUNCTION, DISRUPTION PHENOTYPE, AND INDUCTION BY GIBBERELLIC ACID.
STRAIN=cv. Columbia;
PubMed=20699403; DOI=10.1104/pp.110.160630;
Alonso-Peral M.M., Li J., Li Y., Allen R.S., Schnippenkoetter W.,
Ohms S., White R.G., Millar A.A.;
"The microRNA159-regulated GAMYB-like genes inhibit growth and promote
programmed cell death in Arabidopsis.";
Plant Physiol. 154:757-771(2010).
[13]
FUNCTION, AND DISRUPTION PHENOTYPE.
PubMed=22101548; DOI=10.1007/s00497-011-0178-8;
Renak D., Dupl'akova N., Honys D.;
"Wide-scale screening of T-DNA lines for transcription factor genes
affecting male gametophyte development in Arabidopsis.";
Sex. Plant Reprod. 25:39-60(2012).
[14]
FUNCTION, DISRUPTION PHENOTYPE, TISSUE SPECIFICITY, DEVELOPMENTAL
STAGE, AND SUBCELLULAR LOCATION.
STRAIN=cv. Columbia;
PubMed=23791732; DOI=10.1016/j.cub.2013.05.021;
Leydon A.R., Beale K.M., Woroniecka K., Castner E., Chen J.,
Horgan C., Palanivelu R., Johnson M.A.;
"Three MYB transcription factors control pollen tube differentiation
required for sperm release.";
Curr. Biol. 23:1209-1214(2013).
[15]
FUNCTION, DISRUPTION PHENOTYPE, SUBCELLULAR LOCATION, AND TISSUE
SPECIFICITY.
STRAIN=cv. Columbia;
PubMed=24278028; DOI=10.1371/journal.pgen.1003933;
Liang Y., Tan Z.-M., Zhu L., Niu Q.-K., Zhou J.-J., Li M., Chen L.-Q.,
Zhang X.-Q., Ye D.;
"MYB97, MYB101 and MYB120 function as male factors that control pollen
tube-synergid interaction in Arabidopsis thaliana fertilization.";
PLoS Genet. 9:E1003933-E1003933(2013).
[16]
FUNCTION, SUBCELLULAR LOCATION, AND TISSUE SPECIFICITY.
STRAIN=cv. Columbia;
PubMed=25268707; DOI=10.1371/journal.pone.0107637;
An R., Liu X., Wang R., Wu H., Liang S., Shao J., Qi Y., An L., Yu F.;
"The over-expression of two transcription factors, ABS5/bHLH30 and
ABS7/MYB101, leads to upwardly curly leaves.";
PLoS ONE 9:E107637-E107637(2014).
-!- FUNCTION: Transcription activator (PubMed:24278028,
PubMed:25268707). Binds to 5'-CAACTGTC-3' and/or 5'-TAACAAA-3'
motif in target gene promoter (e.g. alpha-amylase) to promote
their expression (PubMed:11743113). Positive regulator of abscisic
acid (ABA) responses leading to growth arrest during seed
germination (PubMed:17217461). Promotes the expression of
aleurone-related genes (e.g. CP1, CP, GASA1, BXL1 and BXL2) in
seeds. Together with MYB33 and MYB65, promotes the programmed cell
death (PCD) leading to vacuolation of protein storage vacuoles
(PSVs) in the aleurone layers during seed germination
(PubMed:20699403). Maybe involved in the regulation of leaves
lamina morphogenesis (PubMed:25268707). Involved in pollen grain
development (PubMed:22101548). Together with MYB97 and MYB120,
functions as a male factor that controls pollen tube-synergid
interaction in fertilization. Required for pollen tube growth
arrest and sperm cell release in the female gametophyte, probably
via the regulation of pollen tube-specific gene expression
(PubMed:24278028, PubMed:23791732). {ECO:0000269|PubMed:11743113,
ECO:0000269|PubMed:17217461, ECO:0000269|PubMed:20699403,
ECO:0000269|PubMed:22101548, ECO:0000269|PubMed:23791732,
ECO:0000269|PubMed:24278028, ECO:0000269|PubMed:25268707}.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-
ProRule:PRU00625, ECO:0000269|PubMed:23791732,
ECO:0000269|PubMed:24278028, ECO:0000269|PubMed:25268707}.
Note=Detected in the vegetative nucleus of mature pollen grains
and pollen tubes. {ECO:0000269|PubMed:23791732}.
-!- ALTERNATIVE PRODUCTS:
Event=Alternative splicing; Named isoforms=3;
Name=1;
IsoId=O80883-1; Sequence=Displayed;
Name=2;
IsoId=O80883-2; Sequence=VSP_058816;
Note=Derived from EST data. No experimental confirmation
available. {ECO:0000312|EMBL:AEC08689.1};
Name=3;
IsoId=O80883-3; Sequence=VSP_058815;
Note=No experimental confirmation available.
{ECO:0000312|EMBL:BAH57256.1};
-!- TISSUE SPECIFICITY: Present mostly in flowers, siliques and floral
shoot tips (PubMed:11743113, PubMed:25268707). Expression is
restricted to the subapical pith cells of both vegetative and
flowering plants and to the hypocotyl hook (PubMed:11743113).
Expressed in pollen grains and pollen tube (PubMed:23791732,
PubMed:24278028). Mostly expressed in mature pollen grains, and,
to a lower extent, in inflorescences and siliques
(PubMed:24278028). {ECO:0000269|PubMed:11743113,
ECO:0000269|PubMed:23791732, ECO:0000269|PubMed:24278028,
ECO:0000269|PubMed:25268707}.
-!- DEVELOPMENTAL STAGE: Present in a small patch of cells on the
innermost side of the hypocotyl hook of the germinating seedling,
in the subapical pith cells of plants growing vegetatively, in a
similar zone of expanding cells both in developing inflorescence
stems, and below mature flowers and elongating siliques
(PubMed:11743113). Accumulates in the pollen tube nucleus during
pollen tube growth through the pistil (PubMed:23791732).
{ECO:0000269|PubMed:11743113, ECO:0000269|PubMed:23791732}.
-!- INDUCTION: Repressed in germinating seeds by microRNA159 (miR159)-
mediated cleavage in an abscisic acid (ABA) and ABI3-dependent
manner, probably to desensitize hormone signaling during seedling
stress responses (PubMed:15226253, PubMed:17217461). Induced by
increased upon gibberellic acid (GA) treatment (PubMed:20699403).
{ECO:0000269|PubMed:15226253, ECO:0000269|PubMed:17217461,
ECO:0000269|PubMed:20699403}.
-!- DISRUPTION PHENOTYPE: Hyposensitivity to abscisic acid (ABA)
(PubMed:17217461). Reduced expression levels of aleurone-related
genes (e.g. CP1, CP, GASA1, BXL1 and BXL2) in seeds. The triple
mutant myb33 myb65 myb101 has a male sterility and exhibits slower
protein storage vacuoles (PSVs) vacuolation rate in aleurone
layers upon seed germination (PubMed:20699403). Reduced production
of abnormal pollen grains with misarranged male germ unit (MGU)
(PubMed:22101548). The triple mutant myb97 myb101 myb120 is
impaired in pollen tube growth arrest and subsequent sperm cell
release in the female gametophyte thus leading to a drastically
reduced fertility. Altered pollen tube-specific gene expression
(PubMed:23791732, PubMed:24278028). {ECO:0000269|PubMed:17217461,
ECO:0000269|PubMed:20699403, ECO:0000269|PubMed:22101548,
ECO:0000269|PubMed:23791732, ECO:0000269|PubMed:24278028}.
-----------------------------------------------------------------------
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EMBL; AF411970; AAL58845.1; -; mRNA.
EMBL; AY519576; AAS10046.1; -; mRNA.
EMBL; AC004681; AAC25928.1; -; Genomic_DNA.
EMBL; AC005700; AAM15072.1; -; Genomic_DNA.
EMBL; CP002685; AEC08688.1; -; Genomic_DNA.
EMBL; CP002685; AEC08689.1; -; Genomic_DNA.
EMBL; AK319141; BAH57256.1; -; mRNA.
EMBL; AK229342; BAF01205.1; -; mRNA.
EMBL; BT026381; ABH04488.1; -; mRNA.
PIR; T02545; T02545.
RefSeq; NP_001077993.1; NM_001084524.1. [O80883-2]
RefSeq; NP_180805.1; NM_128805.4. [O80883-1]
UniGene; At.28270; -.
ProteinModelPortal; O80883; -.
SMR; O80883; -.
IntAct; O80883; 3.
STRING; 3702.AT2G32460.1; -.
PaxDb; O80883; -.
EnsemblPlants; AT2G32460.1; AT2G32460.1; AT2G32460. [O80883-1]
EnsemblPlants; AT2G32460.2; AT2G32460.2; AT2G32460. [O80883-2]
GeneID; 817807; -.
Gramene; AT2G32460.1; AT2G32460.1; AT2G32460.
Gramene; AT2G32460.2; AT2G32460.2; AT2G32460.
KEGG; ath:AT2G32460; -.
Araport; AT2G32460; -.
TAIR; locus:2060241; AT2G32460.
eggNOG; KOG0048; Eukaryota.
eggNOG; COG5147; LUCA.
HOGENOM; HOG000006120; -.
KO; K09422; -.
OMA; NHILEYI; -.
OrthoDB; EOG09360AU3; -.
PRO; PR:O80883; -.
Proteomes; UP000006548; Chromosome 2.
GO; GO:0005634; C:nucleus; IDA:UniProtKB.
GO; GO:0090406; C:pollen tube; IDA:TAIR.
GO; GO:0000981; F:RNA polymerase II transcription factor activity, sequence-specific DNA binding; IBA:GO_Central.
GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
GO; GO:0001135; F:transcription factor activity, RNA polymerase II transcription factor recruiting; IBA:GO_Central.
GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IDA:UniProtKB.
GO; GO:0044212; F:transcription regulatory region DNA binding; IBA:GO_Central.
GO; GO:0009740; P:gibberellic acid mediated signaling pathway; TAS:TAIR.
GO; GO:0009555; P:pollen development; IMP:TAIR.
GO; GO:0048235; P:pollen sperm cell differentiation; IMP:UniProtKB.
GO; GO:0009789; P:positive regulation of abscisic acid-activated signaling pathway; IMP:TAIR.
GO; GO:0043068; P:positive regulation of programmed cell death; IMP:TAIR.
GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:UniProtKB.
GO; GO:1990019; P:protein storage vacuole organization; IMP:UniProtKB.
GO; GO:0010468; P:regulation of gene expression; IMP:UniProtKB.
GO; GO:1901371; P:regulation of leaf morphogenesis; IMP:UniProtKB.
GO; GO:0080092; P:regulation of pollen tube growth; IMP:UniProtKB.
GO; GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IBA:GO_Central.
GO; GO:0009739; P:response to gibberellin; IEP:UniProtKB.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
CDD; cd00167; SANT; 2.
InterPro; IPR009057; Homeobox-like_sf.
InterPro; IPR017930; Myb_dom.
InterPro; IPR001005; SANT/Myb.
Pfam; PF00249; Myb_DNA-binding; 2.
SMART; SM00717; SANT; 2.
SUPFAM; SSF46689; SSF46689; 1.
PROSITE; PS51294; HTH_MYB; 2.
2: Evidence at transcript level;
Activator; Alternative splicing; Complete proteome; DNA-binding;
Nucleus; Reference proteome; Repeat; Transcription;
Transcription regulation.
CHAIN 1 490 Transcription factor MYB101.
/FTId=PRO_0000439245.
DOMAIN 15 67 HTH myb-type 1. {ECO:0000255|PROSITE-
ProRule:PRU00625}.
DOMAIN 68 122 HTH myb-type 2. {ECO:0000255|PROSITE-
ProRule:PRU00625}.
DNA_BIND 43 67 H-T-H motif. {ECO:0000255|PROSITE-
ProRule:PRU00625}.
DNA_BIND 95 118 H-T-H motif. {ECO:0000255|PROSITE-
ProRule:PRU00625}.
COMPBIAS 171 243 Ser-rich. {ECO:0000255|PROSITE-
ProRule:PRU00016}.
VAR_SEQ 1 97 Missing (in isoform 3).
/FTId=VSP_058815.
VAR_SEQ 1 14 MDGGGETTATATME -> MV (in isoform 2).
/FTId=VSP_058816.
CONFLICT 314 314 S -> N (in Ref. 1; AAL58845).
{ECO:0000305}.
CONFLICT 383 383 N -> H (in Ref. 1; AAL58845).
{ECO:0000305}.
SEQUENCE 490 AA; 54437 MW; D91A8A86FA3D5FC9 CRC64;
MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS GLLRCGKSCR
LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS QLPGRTDNEI KNYWNTRMKR
RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS
FSSSSSQPSK RLRPDPLVST NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS
SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC
EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP TMVKVTVDDD DELLTSLLNN
FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS
CYWSNMPSIC


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Genprice Inc, Invoices and accounting
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