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Transcription factor MYB108 (Myb-related protein 108) (AtMYB108) (Protein BOTRYTIS-SUSCEPTIBLE 1)

 MY108_ARATH             Reviewed;         323 AA.
Q9LDE1; Q6R095;
11-DEC-2013, integrated into UniProtKB/Swiss-Prot.
01-OCT-2000, sequence version 1.
12-SEP-2018, entry version 136.
RecName: Full=Transcription factor MYB108;
AltName: Full=Myb-related protein 108;
Short=AtMYB108;
AltName: Full=Protein BOTRYTIS-SUSCEPTIBLE 1;
Name=MYB108; Synonyms=BOS1; OrderedLocusNames=At3g06490;
ORFNames=F5E6.18;
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=cv. Columbia;
PubMed=11597504; DOI=10.1016/S1369-5266(00)00199-0;
Stracke R., Werber M., Weisshaar B.;
"The R2R3-MYB gene family in Arabidopsis thaliana.";
Curr. Opin. Plant Biol. 4:447-456(2001).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
Qu L., Gu H.;
"The MYB transcription factor family in Arabidopsis: a genome-wide
cloning and expression pattern analysis.";
Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=11130713; DOI=10.1038/35048706;
Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M.,
Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B.,
Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P.,
De Simone V., Choisne N., Artiguenave F., Robert C., Brottier P.,
Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F.,
Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V.,
Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S.,
Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G.,
Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B.,
Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G.,
Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J.,
Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D.,
Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
Monfort A., Argiriou A., Flores M., Liguori R., Vitale D.,
Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W.,
Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J.,
Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P.,
Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S.,
Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V.,
Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C.,
Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E.,
Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y.,
Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A.,
Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
Watanabe A., Yamada M., Yasuda M., Tabata S.;
"Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana.";
Nature 408:820-822(2000).
[4]
GENOME REANNOTATION.
STRAIN=cv. Columbia;
PubMed=27862469; DOI=10.1111/tpj.13415;
Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
Town C.D.;
"Araport11: a complete reannotation of the Arabidopsis thaliana
reference genome.";
Plant J. 89:789-804(2017).
[5]
FUNCTION, DISRUPTION PHENOTYPE, AND INDUCTION BY PATHOGEN.
PubMed=14555693; DOI=10.1105/tpc.014167;
Mengiste T., Chen X., Salmeron J., Dietrich R.;
"The BOTRYTIS SUSCEPTIBLE1 gene encodes an R2R3MYB transcription
factor protein that is required for biotic and abiotic stress
responses in Arabidopsis.";
Plant Cell 15:2551-2565(2003).
[6]
FUNCTION, DISRUPTION PHENOTYPE, TISSUE SPECIFICITY, AND INDUCTION BY
JASMONATE.
PubMed=19091873; DOI=10.1104/pp.108.132597;
Mandaokar A., Browse J.;
"MYB108 acts together with MYB24 to regulate jasmonate-mediated stamen
maturation in Arabidopsis.";
Plant Physiol. 149:851-862(2009).
[7]
FUNCTION, SUBCELLULAR LOCATION, INTERACTION WITH BOI AND BRG1, AND
UBIQUITINATION.
PubMed=20921156; DOI=10.1104/pp.110.163915;
Luo H., Laluk K., Lai Z., Veronese P., Song F., Mengiste T.;
"The Arabidopsis Botrytis Susceptible1 Interactor defines a subclass
of RING E3 ligases that regulate pathogen and stress responses.";
Plant Physiol. 154:1766-1782(2010).
[8]
FUNCTION.
PubMed=23952703; DOI=10.1111/nph.12456;
Cui F., Brosche M., Sipari N., Tang S., Overmyer K.;
"Regulation of ABA dependent wound induced spreading cell death by
MYB108.";
New Phytol. 200:634-640(2013).
-!- FUNCTION: Transcription factor contributing to the regulation of
stamen maturation and male fertility in response to jasmonate
signaling. Required for correct timing of anther dehiscence. Acts
as a negative regulator of abscisic acid-induced cell death. Not
involved in the regulation of BOI. Regulated by MYB21 and at a
lower level by MYB24. Negatively regulated by the proteasome in an
SCF(COI1) E3 ubiquitin-protein ligase complex-dependent manner.
{ECO:0000269|PubMed:14555693, ECO:0000269|PubMed:19091873,
ECO:0000269|PubMed:20921156, ECO:0000269|PubMed:23952703}.
-!- SUBUNIT: Interacts with BOI, but not with BRG1.
{ECO:0000269|PubMed:20921156}.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-
ProRule:PRU00625, ECO:0000269|PubMed:20921156}.
-!- TISSUE SPECIFICITY: Expressed specifically in flowers. Restricted
to anthers in maturing flowers. Strongest expression in the
vascular and connective tissue where the anther attaches to the
filament. Not detected in pollen. {ECO:0000269|PubMed:19091873}.
-!- INDUCTION: Up-regulated by jasmonate and pathogen infection.
{ECO:0000269|PubMed:14555693, ECO:0000269|PubMed:19091873}.
-!- PTM: Ubiquitinated in vitro by BOI. {ECO:0000269|PubMed:20921156}.
-!- DISRUPTION PHENOTYPE: Reduced male fertility associated with
delayed anther dehiscence, reduced pollen viability and decreased
fecundity. Increased susceptibility to Botrytis infection. Myb24
and myb108 double mutant has a reduced fertility and a greatly
reduced seed set relative to the myb108 parental allele.
{ECO:0000269|PubMed:14555693, ECO:0000269|PubMed:19091873}.
-----------------------------------------------------------------------
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EMBL; AF262733; AAF72668.1; -; mRNA.
EMBL; AY519584; AAS10054.1; -; mRNA.
EMBL; AC020580; AAG51322.1; -; Genomic_DNA.
EMBL; CP002686; AEE74402.1; -; Genomic_DNA.
RefSeq; NP_187301.1; NM_111525.4.
UniGene; At.14823; -.
ProteinModelPortal; Q9LDE1; -.
SMR; Q9LDE1; -.
BioGrid; 5162; 1.
IntAct; Q9LDE1; 2.
STRING; 3702.AT3G06490.1; -.
PaxDb; Q9LDE1; -.
PRIDE; Q9LDE1; -.
EnsemblPlants; AT3G06490.1; AT3G06490.1; AT3G06490.
GeneID; 819827; -.
Gramene; AT3G06490.1; AT3G06490.1; AT3G06490.
KEGG; ath:AT3G06490; -.
Araport; AT3G06490; -.
TAIR; locus:2084269; AT3G06490.
eggNOG; KOG0048; Eukaryota.
eggNOG; COG5147; LUCA.
HOGENOM; HOG000237600; -.
InParanoid; Q9LDE1; -.
KO; K09422; -.
OMA; WFEDING; -.
OrthoDB; EOG09360N16; -.
PhylomeDB; Q9LDE1; -.
PRO; PR:Q9LDE1; -.
Proteomes; UP000006548; Chromosome 3.
ExpressionAtlas; Q9LDE1; baseline and differential.
Genevisible; Q9LDE1; AT.
GO; GO:0005634; C:nucleus; IDA:TAIR.
GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
GO; GO:0000981; F:RNA polymerase II transcription factor activity, sequence-specific DNA binding; IBA:GO_Central.
GO; GO:0043565; F:sequence-specific DNA binding; IPI:TAIR.
GO; GO:0001135; F:transcription factor activity, RNA polymerase II transcription factor recruiting; IBA:GO_Central.
GO; GO:0044212; F:transcription regulatory region DNA binding; IBA:GO_Central.
GO; GO:0030154; P:cell differentiation; IBA:GO_Central.
GO; GO:0006952; P:defense response; IEA:UniProtKB-KW.
GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
GO; GO:0009737; P:response to abscisic acid; IEP:TAIR.
GO; GO:0009723; P:response to ethylene; IEP:TAIR.
GO; GO:0009620; P:response to fungus; IMP:TAIR.
GO; GO:0009753; P:response to jasmonic acid; IEP:TAIR.
GO; GO:0009651; P:response to salt stress; IEP:TAIR.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
CDD; cd00167; SANT; 2.
InterPro; IPR009057; Homeobox-like_sf.
InterPro; IPR017930; Myb_dom.
InterPro; IPR001005; SANT/Myb.
Pfam; PF00249; Myb_DNA-binding; 2.
SMART; SM00717; SANT; 2.
SUPFAM; SSF46689; SSF46689; 1.
PROSITE; PS51294; HTH_MYB; 2.
1: Evidence at protein level;
Activator; Complete proteome; DNA-binding; Nucleus; Plant defense;
Reference proteome; Repeat; Transcription; Transcription regulation;
Ubl conjugation.
CHAIN 1 323 Transcription factor MYB108.
/FTId=PRO_0000424714.
DOMAIN 16 68 HTH myb-type 1. {ECO:0000255|PROSITE-
ProRule:PRU00625}.
DOMAIN 69 123 HTH myb-type 2. {ECO:0000255|PROSITE-
ProRule:PRU00625}.
DNA_BIND 44 68 H-T-H motif. {ECO:0000255|PROSITE-
ProRule:PRU00625}.
DNA_BIND 96 119 H-T-H motif. {ECO:0000255|PROSITE-
ProRule:PRU00625}.
COMPBIAS 159 162 Poly-Ala.
COMPBIAS 163 181 Thr-rich.
COMPBIAS 183 206 Asn-rich.
COMPBIAS 312 316 Poly-Gln.
CONFLICT 214 214 S -> F (in Ref. 2; AAS10054).
{ECO:0000305}.
CONFLICT 292 292 A -> V (in Ref. 2; AAS10054).
{ECO:0000305}.
SEQUENCE 323 AA; 37020 MW; BB0FF0A362192165 CRC64;
MDEKGRSLKN NNMEDEMDLK RGPWTAEEDF KLMNYIATNG EGRWNSLSRC AGLQRTGKSC
RLRWLNYLRP DVRRGNITLE EQLLILELHS RWGNRWSKIA QYLPGRTDNE IKNYWRTRVQ
KHAKQLKCDV NSQQFKDTMK YLWMPRLVER IQSASASSAA AATTTTTTTT GSAGTSSCIT
TSNNQFMNYD YNNNNMGQQF GVMSNNDYIT PENSSVAVSP ASDLTEYYSA PNPNPEYYSG
QMGNSYYPDQ NLVSSQLLPD NYFDYSGLLD EDLTAMQEQS NLSWFENING AASSSDSLWN
IGETDEEFWF LQQQQQFNNN GSF


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