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Transcription factor MYB75 (Myb-related protein 75) (AtMYB75) (Production of anthocyanin pigment 1 protein) (Suc-induced anthocyanin accumulation locus 1)

 MYB75_ARATH             Reviewed;         248 AA.
Q9FE25; Q38JL3; Q38JL4; Q38JL5; Q6R0B5; Q9ZTC7;
01-MAY-2007, integrated into UniProtKB/Swiss-Prot.
01-MAR-2001, sequence version 1.
22-NOV-2017, entry version 128.
RecName: Full=Transcription factor MYB75;
AltName: Full=Myb-related protein 75;
Short=AtMYB75;
AltName: Full=Production of anthocyanin pigment 1 protein;
AltName: Full=Suc-induced anthocyanin accumulation locus 1;
Name=MYB75; Synonyms=PAP1, SIAA1; OrderedLocusNames=At1g56650;
ORFNames=F25P12.92;
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, AND INDUCTION BY
SUCROSE; UV LIGHT AND DROUGHT.
STRAIN=cv. Columbia;
PubMed=9839469; DOI=10.1046/j.1365-313x.1998.00278.x;
Kranz H.D., Denekamp M., Greco R., Jin H.-L., Leyva A., Meissner R.C.,
Petroni K., Urzainqui A., Bevan M., Martin C., Smeekens S.,
Tonelli C., Paz-Ares J., Weisshaar B.;
"Towards functional characterisation of the members of the R2R3-MYB
gene family from Arabidopsis thaliana.";
Plant J. 16:263-276(1998).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND FUNCTION.
STRAIN=cv. Columbia;
PubMed=11148285; DOI=10.1105/tpc.12.12.2383;
Borevitz J.O., Xia Y., Blount J., Dixon R.A., Lamb C.;
"Activation tagging identifies a conserved MYB regulator of
phenylpropanoid biosynthesis.";
Plant Cell 12:2383-2393(2000).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, AND VARIANTS HIS-37;
ASN-60; THR-136; SER-147; 147-SER-GLY-148; ASN-160; ARG-167; THR-172;
ASN-179; MET-215 AND THR-220.
STRAIN=cv. C24, cv. Cvi-1, and cv. Landsberg erecta;
PubMed=16299184; DOI=10.1104/pp.105.066688;
Teng S., Keurentjes J., Bentsink L., Koornneef M., Smeekens S.;
"Sucrose-specific induction of anthocyanin biosynthesis in Arabidopsis
requires the MYB75/PAP1 gene.";
Plant Physiol. 139:1840-1852(2005).
[4]
NUCLEOTIDE SEQUENCE [MRNA].
Qu L.-J., Gu H.;
"The MYB transcription factor family in Arabidopsis: a genome-wide
cloning and expression pattern analysis.";
Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=11130712; DOI=10.1038/35048500;
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S.,
White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y.,
Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W.,
Chung M.K., Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K.,
Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y.,
Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L.,
Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E.,
Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B.,
Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P.,
Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A.,
Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I.,
Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D.,
Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M.,
Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M.,
Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.;
"Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana.";
Nature 408:816-820(2000).
[6]
GENOME REANNOTATION.
STRAIN=cv. Columbia;
The Arabidopsis Information Portal (Araport);
Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
[7]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
Hayashizaki Y., Shinozaki K.;
"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
[8]
GENE FAMILY, AND NOMENCLATURE.
PubMed=11597504; DOI=10.1016/S1369-5266(00)00199-0;
Stracke R., Werber M., Weisshaar B.;
"The R2R3-MYB gene family in Arabidopsis thaliana.";
Curr. Opin. Plant Biol. 4:447-456(2001).
[9]
FUNCTION, AND INTERACTION WITH BHLH2.
PubMed=12917293; DOI=10.1242/dev.00681;
Zhang F., Gonzalez A., Zhao M., Payne C.T., Lloyd A.M.;
"A network of redundant bHLH proteins functions in all TTG1-dependent
pathways of Arabidopsis.";
Development 130:4859-4869(2003).
[10]
FUNCTION, AND TISSUE SPECIFICITY.
PubMed=17147621; DOI=10.1111/j.1467-7652.2004.00094.x;
Matsui K., Tanaka H., Ohme-Takagi M.;
"Suppression of the biosynthesis of proanthocyanidin in Arabidopsis by
a chimeric PAP1 repressor.";
Plant Biotechnol. J. 2:487-493(2004).
[11]
FUNCTION, AND INTERACTION WITH BHLH12; BHLH1; BHLH2 AND BHLH42.
PubMed=15361138; DOI=10.1111/j.1365-313X.2004.02183.x;
Zimmermann I.M., Heim M.A., Weisshaar B., Uhrig J.F.;
"Comprehensive identification of Arabidopsis thaliana MYB
transcription factors interacting with R/B-like BHLH proteins.";
Plant J. 40:22-34(2004).
[12]
FUNCTION.
PubMed=15807784; DOI=10.1111/j.1365-313X.2005.02371.x;
Tohge T., Nishiyama Y., Hirai M.Y., Yano M., Nakajima J.,
Awazuhara M., Inoue E., Takahashi H., Goodenowe D.B., Kitayama M.,
Noji M., Yamazaki M., Saito K.;
"Functional genomics by integrated analysis of metabolome and
transcriptome of Arabidopsis plants over-expressing an MYB
transcription factor.";
Plant J. 42:218-235(2005).
[13]
GENE FAMILY, AND INDUCTION BY JA AND NACL.
PubMed=16463103; DOI=10.1007/s11103-005-2910-y;
Chen Y., Yang X., He K., Liu M., Li J., Gao Z., Lin Z., Zhang Y.,
Wang X., Qiu X., Shen Y., Zhang L., Deng X., Luo J., Deng X.-W.,
Chen Z., Gu H., Qu L.-J.;
"The MYB transcription factor superfamily of Arabidopsis: expression
analysis and phylogenetic comparison with the rice MYB family.";
Plant Mol. Biol. 60:107-124(2006).
[14]
INDUCTION BY NITROGEN DEFICIENCY.
PubMed=17053893; DOI=10.1007/s00425-006-0414-x;
Lea U.S., Slimestad R., Smedvig P., Lillo C.;
"Nitrogen deficiency enhances expression of specific MYB and bHLH
transcription factors and accumulation of end products in the
flavonoid pathway.";
Planta 225:1245-1253(2007).
-!- FUNCTION: Transcription activator, when associated with
BHLH12/MYC1, EGL3, or GL3. Promotes the synthesis of.
phenylpropanoid-derived compounds such as anthocyanins and
proanthocyanidin, probably together with GL3 and BHLH2. Regulates
the expression of CHS, DFRA, LDOX, and BAN.
{ECO:0000269|PubMed:11148285, ECO:0000269|PubMed:12917293,
ECO:0000269|PubMed:15361138, ECO:0000269|PubMed:15807784,
ECO:0000269|PubMed:16299184, ECO:0000269|PubMed:17147621}.
-!- SUBUNIT: Interacts with BHLH12/MYC1, BHLH1/GL3/MYC6,
BHLH2/EGL3/MYC146, and BHLH42/TT8. {ECO:0000269|PubMed:12917293,
ECO:0000269|PubMed:15361138}.
-!- INTERACTION:
Q8W2F1:BHLH12; NbExp=3; IntAct=EBI-1545177, EBI-1546379;
Q9CAD0:BHLH2; NbExp=5; IntAct=EBI-1545177, EBI-533398;
Q9FN69:GL3; NbExp=2; IntAct=EBI-1545177, EBI-533348;
Q9FT81:TT8; NbExp=5; IntAct=EBI-1545177, EBI-395790;
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
-!- TISSUE SPECIFICITY: Mostly expressed in mature plant aerial part.
Detected ubiquitously, with higher levels in rosette leaves and
flowers. {ECO:0000269|PubMed:17147621,
ECO:0000269|PubMed:9839469}.
-!- INDUCTION: By jasmonic acid (JA), NaCl, sucrose, UV light,
nitrogen deficiency and drought. {ECO:0000269|PubMed:16463103,
ECO:0000269|PubMed:17053893, ECO:0000269|PubMed:9839469}.
-!- MISCELLANEOUS: This protein has reduced anthocyanins induction
activity in cv C24 and cv cvi-1 backgrounds.
-!- SEQUENCE CAUTION:
Sequence=AAC83630.1; Type=Frameshift; Positions=207; Evidence={ECO:0000305};
-----------------------------------------------------------------------
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EMBL; AF062908; AAC83630.1; ALT_FRAME; mRNA.
EMBL; AF325123; AAG42001.1; -; Genomic_DNA.
EMBL; DQ222404; ABB03877.1; -; Genomic_DNA.
EMBL; DQ222405; ABB03878.1; -; Genomic_DNA.
EMBL; DQ222406; ABB03879.1; -; Genomic_DNA.
EMBL; AY519563; AAS10033.1; -; mRNA.
EMBL; AC009323; AAG09100.1; -; Genomic_DNA.
EMBL; CP002684; AEE33419.1; -; Genomic_DNA.
EMBL; AK221639; BAD95284.1; -; mRNA.
PIR; B96608; B96608.
PIR; T51680; T51680.
RefSeq; NP_176057.1; NM_104541.4.
UniGene; At.20447; -.
ProteinModelPortal; Q9FE25; -.
SMR; Q9FE25; -.
BioGrid; 27345; 15.
IntAct; Q9FE25; 53.
STRING; 3702.AT1G56650.1; -.
PaxDb; Q9FE25; -.
EnsemblPlants; AT1G56650.1; AT1G56650.1; AT1G56650.
GeneID; 842120; -.
Gramene; AT1G56650.1; AT1G56650.1; AT1G56650.
KEGG; ath:AT1G56650; -.
Araport; AT1G56650; -.
TAIR; locus:2027523; AT1G56650.
eggNOG; KOG0048; Eukaryota.
eggNOG; COG5147; LUCA.
HOGENOM; HOG000237600; -.
InParanoid; Q9FE25; -.
KO; K16166; -.
OMA; HEPCCKI; -.
OrthoDB; EOG09360TBI; -.
PhylomeDB; Q9FE25; -.
PRO; PR:Q9FE25; -.
Proteomes; UP000006548; Chromosome 1.
Genevisible; Q9FE25; AT.
GO; GO:0005634; C:nucleus; IBA:GO_Central.
GO; GO:0000981; F:RNA polymerase II transcription factor activity, sequence-specific DNA binding; IBA:GO_Central.
GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
GO; GO:0001135; F:transcription factor activity, RNA polymerase II transcription factor recruiting; IBA:GO_Central.
GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; ISS:TAIR.
GO; GO:0044212; F:transcription regulatory region DNA binding; IBA:GO_Central.
GO; GO:0009718; P:anthocyanin-containing compound biosynthetic process; IMP:TAIR.
GO; GO:0030154; P:cell differentiation; IBA:GO_Central.
GO; GO:0050832; P:defense response to fungus; IEP:TAIR.
GO; GO:0009867; P:jasmonic acid mediated signaling pathway; IMP:TAIR.
GO; GO:0031542; P:positive regulation of anthocyanin biosynthetic process; IMP:TAIR.
GO; GO:0031540; P:regulation of anthocyanin biosynthetic process; IMP:TAIR.
GO; GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IBA:GO_Central.
GO; GO:0019430; P:removal of superoxide radicals; IMP:TAIR.
GO; GO:0009733; P:response to auxin; IEP:TAIR.
GO; GO:0009723; P:response to ethylene; IEP:TAIR.
GO; GO:0009753; P:response to jasmonic acid; IEP:TAIR.
GO; GO:0009651; P:response to salt stress; IEP:TAIR.
GO; GO:0009745; P:sucrose mediated signaling; IMP:TAIR.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
CDD; cd00167; SANT; 1.
InterPro; IPR009057; Homeobox-like_sf.
InterPro; IPR017930; Myb_dom.
InterPro; IPR001005; SANT/Myb.
Pfam; PF00249; Myb_DNA-binding; 2.
SMART; SM00717; SANT; 2.
SUPFAM; SSF46689; SSF46689; 1.
PROSITE; PS51294; HTH_MYB; 2.
1: Evidence at protein level;
Activator; Complete proteome; DNA-binding; Nucleus; Polymorphism;
Reference proteome; Repeat; Transcription; Transcription regulation.
CHAIN 1 248 Transcription factor MYB75.
/FTId=PRO_0000285730.
DOMAIN 5 57 HTH myb-type 1. {ECO:0000255|PROSITE-
ProRule:PRU00625}.
DOMAIN 58 112 HTH myb-type 2. {ECO:0000255|PROSITE-
ProRule:PRU00625}.
DNA_BIND 33 57 H-T-H motif. {ECO:0000255|PROSITE-
ProRule:PRU00625}.
DNA_BIND 85 108 H-T-H motif. {ECO:0000255|PROSITE-
ProRule:PRU00625}.
VARIANT 37 37 P -> H (in strain: cv. cvi-1).
{ECO:0000269|PubMed:16299184}.
VARIANT 60 60 S -> N (in strain: cv. Landsberg erecta).
{ECO:0000269|PubMed:16299184}.
VARIANT 136 136 N -> T (in strain: cv. C24 and cv.
Landsberg erecta).
{ECO:0000269|PubMed:16299184}.
VARIANT 147 148 TV -> SG (in strain: cv. Landsberg
erecta).
VARIANT 147 147 T -> S (in strain: cv. C24).
{ECO:0000269|PubMed:16299184}.
VARIANT 160 160 K -> N (in strain: cv. cvi-1).
{ECO:0000269|PubMed:16299184}.
VARIANT 167 167 C -> R (in strain: cv. C24).
{ECO:0000269|PubMed:16299184}.
VARIANT 172 172 I -> T (in strain: cv. C24 and cv.
Landsberg erecta).
{ECO:0000269|PubMed:16299184}.
VARIANT 179 179 S -> N (in strain: cv. C24 and cv.
Landsberg erecta).
{ECO:0000269|PubMed:16299184}.
VARIANT 215 215 I -> M (in strain: cv. C24 and cv.
Landsberg erecta).
{ECO:0000269|PubMed:16299184}.
VARIANT 220 220 A -> T (in strain: cv. C24 and cv.
Landsberg erecta).
{ECO:0000269|PubMed:16299184}.
CONFLICT 246 247 KF -> EL (in Ref. 4; AAS10033).
{ECO:0000305}.
SEQUENCE 248 AA; 28470 MW; B86103A9AB5CF442 CRC64;
MEGSSKGLRK GAWTTEEDSL LRQCINKYGE GKWHQVPVRA GLNRCRKSCR LRWLNYLKPS
IKRGKLSSDE VDLLLRLHRL LGNRWSLIAG RLPGRTANDV KNYWNTHLSK KHEPCCKIKM
KKRDITPIPT TPALKNNVYK PRPRSFTVNN DCNHLNAPPK VDVNPPCLGL NINNVCDNSI
IYNKDKKKDQ LVNNLIDGDN MWLEKFLEES QEVDILVPEA TTTEKGDTLA FDVDQLWSLF
DGETVKFD


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