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Transcription factor cbf11 (C-promoter element-binding factor-like protein 11)

 CBF11_SCHPO             Reviewed;         613 AA.
O74954;
10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
01-NOV-1998, sequence version 1.
12-SEP-2018, entry version 103.
RecName: Full=Transcription factor cbf11;
AltName: Full=C-promoter element-binding factor-like protein 11;
Name=cbf11; ORFNames=SPCC736.08;
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
Schizosaccharomycetes; Schizosaccharomycetales;
Schizosaccharomycetaceae; Schizosaccharomyces.
NCBI_TaxID=284812;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=972 / ATCC 24843;
PubMed=11859360; DOI=10.1038/nature724;
Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M.,
Collins M., Connor R., Cronin A., Davis P., Feltwell T., Fraser A.,
Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G.,
Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K.,
James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J.,
Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C.,
Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E.,
Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S.,
Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K.,
Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S.,
Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B.,
Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S.,
Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D.,
Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R.,
Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B.,
Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S.,
Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M.,
Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G.,
Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J.,
Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L.,
Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J.,
Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.;
"The genome sequence of Schizosaccharomyces pombe.";
Nature 415:871-880(2002).
[2]
SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
PubMed=16823372; DOI=10.1038/nbt1222;
Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S.,
Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S.,
Yoshida M.;
"ORFeome cloning and global analysis of protein localization in the
fission yeast Schizosaccharomyces pombe.";
Nat. Biotechnol. 24:841-847(2006).
[3]
INDUCTION, SUBCELLULAR LOCATION, DNA-BINDING, DISRUPTION PHENOTYPE,
AND FUNCTION.
PubMed=19101542; DOI=10.1016/j.yexcr.2008.12.001;
Prevorovsky M., Grousl T., Stanurova J., Rynes J., Nellen W., Puta F.,
Folk P.;
"Cbf11 and Cbf12, the fission yeast CSL proteins, play opposing roles
in cell adhesion and coordination of cell and nuclear division.";
Exp. Cell Res. 315:1533-1547(2009).
-!- FUNCTION: Transcription factor that behaves as a negative
regulator of adhesion. Recognizes specifically the canonical CSL
response element GTGA/GGAA. May also play a cbf12-antagonistic
role in the regulation of a number of other important processes
such as extracellular material production, colony morphogenesis,
ploidy maintenance, or meiosis. {ECO:0000269|PubMed:19101542}.
-!- SUBCELLULAR LOCATION: Cytoplasm. Nucleus.
-!- INDUCTION: Expression is fairly constant throughout the growth
phases of haploid cells and similar mRNA levels were found in
vegetative diploid cells. {ECO:0000269|PubMed:19101542}.
-!- DISRUPTION PHENOTYPE: Leads to cold sensitivity, slow growth, and
altered colony morphology. {ECO:0000269|PubMed:19101542}.
-!- SIMILARITY: Belongs to the Su(H) family. {ECO:0000305}.
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EMBL; CU329672; CAA19272.1; -; Genomic_DNA.
PIR; T41565; T41565.
RefSeq; NP_587779.1; NM_001022772.2.
ProteinModelPortal; O74954; -.
BioGrid; 276121; 304.
STRING; 4896.SPCC736.08.1; -.
iPTMnet; O74954; -.
MaxQB; O74954; -.
PaxDb; O74954; -.
PRIDE; O74954; -.
EnsemblFungi; SPCC736.08.1; SPCC736.08.1:pep; SPCC736.08.
GeneID; 2539560; -.
KEGG; spo:SPCC736.08; -.
EuPathDB; FungiDB:SPCC736.08; -.
PomBase; SPCC736.08; cbf11.
InParanoid; O74954; -.
OrthoDB; EOG092C0S59; -.
PhylomeDB; O74954; -.
PRO; PR:O74954; -.
Proteomes; UP000002485; Chromosome III.
GO; GO:0005829; C:cytosol; HDA:PomBase.
GO; GO:0000790; C:nuclear chromatin; IDA:PomBase.
GO; GO:0005634; C:nucleus; IDA:PomBase.
GO; GO:0003700; F:DNA-binding transcription factor activity; IMP:CACAO.
GO; GO:0000978; F:RNA polymerase II proximal promoter sequence-specific DNA binding; IDA:PomBase.
GO; GO:0000977; F:RNA polymerase II regulatory region sequence-specific DNA binding; IDA:PomBase.
GO; GO:0043565; F:sequence-specific DNA binding; IDA:PomBase.
GO; GO:0001077; F:transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding; IMP:PomBase.
GO; GO:0001228; F:transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding; IMP:PomBase.
GO; GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IDA:PomBase.
GO; GO:0019216; P:regulation of lipid metabolic process; IMP:PomBase.
Gene3D; 2.60.40.1450; -; 2.
InterPro; IPR015350; Beta-trefoil_DNA-bd_dom.
InterPro; IPR036358; BTD_sf.
InterPro; IPR008967; p53-like_TF_DNA-bd.
InterPro; IPR015351; RBP-J/Cbf11/Cbf12_DNA-bd.
InterPro; IPR037095; RBP-J/Cbf11/Cbf12_DNA-bd_sf.
Pfam; PF09270; BTD; 1.
Pfam; PF09271; LAG1-DNAbind; 1.
SMART; SM01268; BTD; 1.
SMART; SM01267; LAG1_DNAbind; 1.
SUPFAM; SSF110217; SSF110217; 1.
SUPFAM; SSF49417; SSF49417; 1.
1: Evidence at protein level;
Cell adhesion; Complete proteome; Cytoplasm; DNA-binding; Nucleus;
Reference proteome; Transcription; Transcription regulation.
CHAIN 1 613 Transcription factor cbf11.
/FTId=PRO_0000363405.
SEQUENCE 613 AA; 67173 MW; 5B6235FB6565CD2C CRC64;
MGDYFAWDFA NISGSNTSGS LNLNQLNLDN INNGLHNQED GAGGRNENSE RVGSGSPGSV
SMQVLSLFSA VNSALATLEK SEEFPSVVKD EQSIFPAVAK ASNSLDELAQ NIIPAPSPPG
FNRKRKTFDE DSSVEMIRRA ISDHLDLLNN CCIGIANLNE DSVHKISLTR SGKPSQLVTV
SCRHSSVIQK SYGSEKRYLC PPPMVYINGN YSSIFNQSFR TEISIMNDFG QCSQPISEEY
TGQGCMIFRS LHISSLVAAK SKNLRLSLDM FSNVNNQLLS HLVTSSISIV SKPSKKGSKL
KISNITLRSG SVVSLYNRIN SQTVRTKYTS IEAGQFCLRG DRWVPLRINL LLPDENGKLK
VCDDVDNPEP IKYGSIVELV DEATGTTSDP LIIRRVEKDH IAEEDGYVNQ MHRIVLESAY
PISNVRHLKI AEHSSLAYSN NISVRWFLGA TSAQNRNASS EAILPIEWEA VGNLSSNEMT
RVGDSVCWTI VGISHFDCTM MLPFNQNPVP TVTDYPYIEE PPEYLESSRS LQFKIGGYSV
GLQIWLGVHG PLSYSFTAAA DTSTMGTVTL GLSQISYDPS CAEQKYPLLF VIPGGIVIIG
KCEILLTSSA FGN


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