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Transcriptional activator protein (TrAP)

 A6MNX3_9GEMI            Unreviewed;       135 AA.
A6MNX3;
24-JUL-2007, integrated into UniProtKB/TrEMBL.
24-JUL-2007, sequence version 1.
08-JUN-2016, entry version 13.
RecName: Full=Transcriptional activator protein {ECO:0000256|RuleBase:RU363028};
Short=TrAP {ECO:0000256|RuleBase:RU363028};
Tomato yellow leaf curl virus.
Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
NCBI_TaxID=10832 {ECO:0000313|EMBL:ABR27600.1};
[1] {ECO:0000313|EMBL:ABR27600.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Recombinant Ty-1S-C.3 400dpi type VII
{ECO:0000313|EMBL:ABR27600.1},
Recombinant Ty-1S-C.4 400dpi type VII {ECO:0000313|EMBL:ABR27603.1},
Recombinant Ty-1S-C.5 400dpi type VII {ECO:0000313|EMBL:ABR27606.1},
Recombinant Ty-1S-C.78 400dpi type VII {ECO:0000313|EMBL:ABR27609.1},
Recombinant Ty-1S-C.87 400dpi type VII {ECO:0000313|EMBL:ABR27612.1},
Recombinant Ty-1St-C.10 15dpt type VII {ECO:0000313|EMBL:ABR27621.1},
Recombinant Ty-1St-C.11 15dpt type VII {ECO:0000313|EMBL:ABR27624.1},
Recombinant Ty-1St-C.13 15dpt type VII {ECO:0000313|EMBL:ABR27627.1},
Recombinant Ty-1St-C.14 15dpt type VII {ECO:0000313|EMBL:ABR27630.1},
Recombinant Ty-1St-C.19 15dpt type VII {ECO:0000313|EMBL:ABR27633.1},
Recombinant Ty-1St-C.20 15dpt type VII {ECO:0000313|EMBL:ABR27636.1},
Recombinant Ty-1St-C.21 15dpt type VII {ECO:0000313|EMBL:ABR27639.1},
Recombinant Ty-1St-C.33 15dpt type VII {ECO:0000313|EMBL:ABR27642.1},
Recombinant Ty-1St-C.42 15dpt type VII {ECO:0000313|EMBL:ABR27645.1},
Recombinant Ty-1St-C.48 15dpt type VII {ECO:0000313|EMBL:ABR27648.1},
Recombinant Ty-1St-C.49 15dpt type VII {ECO:0000313|EMBL:ABR27651.1},
Recombinant Ty-1St-C.51 15dpt type VII {ECO:0000313|EMBL:ABR27654.1},
Recombinant Ty-1St-C.66 15dpt type VII {ECO:0000313|EMBL:ABR27657.1},
Recombinant Ty-1St-C.7 15dpt type VII {ECO:0000313|EMBL:ABR27615.1},
Recombinant Ty-1St-C.73 15dpt type VII {ECO:0000313|EMBL:ABR27660.1},
Recombinant Ty-1St-C.79 15dpt type VII {ECO:0000313|EMBL:ABR27663.1},
and Recombinant Ty-1St-C.9 15dpt type VII
{ECO:0000313|EMBL:ABR27618.1};
PubMed=17467025; DOI=10.1016/j.virol.2007.03.045;
Garcia-Andres S., Tomas D.M., Sanchez-Campos S., Navas-Castillo J.,
Moriones E.;
"Frequent occurrence of recombinants in mixed infections of tomato
yellow leaf curl disease-associated begomoviruses.";
Virology 365:210-219(2007).
-!- FUNCTION: Strong activator of the late viral genes promoters. Acts
as a suppressor of RNA-mediated gene silencing, also known as
post-transcriptional gene silencing (PTGS), a mechanism of plant
viral defense that limits the accumulation of viral RNAs. Also
suppresses the host basal defense by interacting with and
inhibiting SNF1 kinase, a key regulator of cell metabolism
implicated in innate antiviral defense. Determines pathogenicity.
{ECO:0000256|RuleBase:RU363028}.
-!- SUBUNIT: Monomer. Homodimer. Homooligomer. Self-interaction
correlates with nuclear localization and efficient activation of
transcription. {ECO:0000256|RuleBase:RU363028}.
-!- SUBCELLULAR LOCATION: Host cytoplasm
{ECO:0000256|RuleBase:RU363028}.
-!- SUBCELLULAR LOCATION: Host nucleus
{ECO:0000256|RuleBase:RU363028}.
-!- DOMAIN: The zinc finger and the transactivation region are
involved in PTGS suppression. {ECO:0000256|RuleBase:RU363028}.
-!- SIMILARITY: Belongs to the geminiviridae transcriptional activator
protein family. {ECO:0000256|RuleBase:RU363028}.
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EMBL; EF423676; ABR27600.1; -; Genomic_DNA.
EMBL; EF423677; ABR27603.1; -; Genomic_DNA.
EMBL; EF423678; ABR27606.1; -; Genomic_DNA.
EMBL; EF423679; ABR27609.1; -; Genomic_DNA.
EMBL; EF423680; ABR27612.1; -; Genomic_DNA.
EMBL; EF423681; ABR27615.1; -; Genomic_DNA.
EMBL; EF423682; ABR27618.1; -; Genomic_DNA.
EMBL; EF423683; ABR27621.1; -; Genomic_DNA.
EMBL; EF423684; ABR27624.1; -; Genomic_DNA.
EMBL; EF423685; ABR27627.1; -; Genomic_DNA.
EMBL; EF423686; ABR27630.1; -; Genomic_DNA.
EMBL; EF423687; ABR27633.1; -; Genomic_DNA.
EMBL; EF423688; ABR27636.1; -; Genomic_DNA.
EMBL; EF423689; ABR27639.1; -; Genomic_DNA.
EMBL; EF423690; ABR27642.1; -; Genomic_DNA.
EMBL; EF423691; ABR27645.1; -; Genomic_DNA.
EMBL; EF423692; ABR27648.1; -; Genomic_DNA.
EMBL; EF423693; ABR27651.1; -; Genomic_DNA.
EMBL; EF423694; ABR27654.1; -; Genomic_DNA.
EMBL; EF423695; ABR27657.1; -; Genomic_DNA.
EMBL; EF423696; ABR27660.1; -; Genomic_DNA.
EMBL; EF423697; ABR27663.1; -; Genomic_DNA.
GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
GO; GO:0019028; C:viral capsid; IEA:InterPro.
GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
GO; GO:0016032; P:viral process; IEA:UniProtKB-KW.
InterPro; IPR000942; Gemini_AL2.
Pfam; PF01440; Gemini_AL2; 1.
PRINTS; PR00230; GEMCOATAL2.
ProDom; PD001117; Gemini_AL2; 1.
3: Inferred from homology;
Activator {ECO:0000256|RuleBase:RU363028};
DNA-binding {ECO:0000256|RuleBase:RU363028};
Host cytoplasm {ECO:0000256|RuleBase:RU363028};
Host nucleus {ECO:0000256|RuleBase:RU363028};
Host-virus interaction {ECO:0000256|RuleBase:RU363028};
Metal-binding {ECO:0000256|RuleBase:RU363028};
Suppressor of RNA silencing {ECO:0000256|RuleBase:RU363028};
Zinc {ECO:0000256|RuleBase:RU363028};
Zinc-finger {ECO:0000256|RuleBase:RU363028}.
SEQUENCE 135 AA; 15653 MW; A5806AAE777FB46B CRC64;
MQPSSPSTSH CSQIPIKVQH KIAKKRQVRR KRIDLDCGCS YYQHLNCNNH GFTHRGTHHC
SSGREWRFYL GDKQSPIFHD NQTQPTTIQQ QIQFPNISNQ VQPQLEEGTG DSQMFSQLPH
LDDLTVSDWS FFKSL


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