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Transcriptional regulator NRG1

 NRG1_CANAL              Reviewed;         310 AA.
Q5A0E5; A0A1D8PRJ2; Q3MNT7;
11-DEC-2013, integrated into UniProtKB/Swiss-Prot.
26-APR-2005, sequence version 1.
31-JAN-2018, entry version 96.
RecName: Full=Transcriptional regulator NRG1;
Name=NRG1; OrderedLocusNames=CAALFM_C704230WA; ORFNames=CaO19.7150;
Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast).
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
Saccharomycetes; Saccharomycetales; Debaryomycetaceae;
Candida/Lodderomyces clade; Candida.
NCBI_TaxID=237561;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SC5314 / ATCC MYA-2876;
PubMed=15123810; DOI=10.1073/pnas.0401648101;
Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S.,
Magee B.B., Newport G., Thorstenson Y.R., Agabian N., Magee P.T.,
Davis R.W., Scherer S.;
"The diploid genome sequence of Candida albicans.";
Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004).
[2]
GENOME REANNOTATION.
STRAIN=SC5314 / ATCC MYA-2876;
PubMed=17419877; DOI=10.1186/gb-2007-8-4-r52;
van het Hoog M., Rast T.J., Martchenko M., Grindle S., Dignard D.,
Hogues H., Cuomo C., Berriman M., Scherer S., Magee B.B., Whiteway M.,
Chibana H., Nantel A., Magee P.T.;
"Assembly of the Candida albicans genome into sixteen supercontigs
aligned on the eight chromosomes.";
Genome Biol. 8:RESEARCH52.1-RESEARCH52.12(2007).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND GENOME
REANNOTATION.
STRAIN=SC5314 / ATCC MYA-2876;
PubMed=24025428; DOI=10.1186/gb-2013-14-9-r97;
Muzzey D., Schwartz K., Weissman J.S., Sherlock G.;
"Assembly of a phased diploid Candida albicans genome facilitates
allele-specific measurements and provides a simple model for repeat
and indel structure.";
Genome Biol. 14:RESEARCH97.1-RESEARCH97.14(2013).
[4]
FUNCTION.
PubMed=11532938; DOI=10.1093/emboj/20.17.4742;
Murad A.M., Leng P., Straffon M., Wishart J., Macaskill S.,
MacCallum D., Schnell N., Talibi D., Marechal D., Tekaia F.,
d'Enfert C., Gaillardin C., Odds F.C., Brown A.J.;
"NRG1 represses yeast-hypha morphogenesis and hypha-specific gene
expression in Candida albicans.";
EMBO J. 20:4742-4752(2001).
[5]
FUNCTION, DISRUPTION PHENOTYPE, AND INDUCTION.
PubMed=11532939; DOI=10.1093/emboj/20.17.4753;
Braun B.R., Kadosh D., Johnson A.D.;
"NRG1, a repressor of filamentous growth in C.albicans, is down-
regulated during filament induction.";
EMBO J. 20:4753-4761(2001).
[6]
FUNCTION.
PubMed=11737641; DOI=10.1046/j.1365-2958.2001.02713.x;
Murad A.M., d'Enfert C., Gaillardin C., Tournu H., Tekaia F.,
Talibi D., Marechal D., Marchais V., Cottin J., Brown A.J.;
"Transcript profiling in Candida albicans reveals new cellular
functions for the transcriptional repressors CaTup1, CaMig1 and
CaNrg1.";
Mol. Microbiol. 42:981-993(2001).
[7]
INDUCTION.
PubMed=12388749; DOI=10.1091/mbc.E02-05-0272;
Nantel A., Dignard D., Bachewich C., Harcus D., Marcil A., Bouin A.P.,
Sensen C.W., Hogues H., van het Hoog M., Gordon P., Rigby T.,
Benoit F., Tessier D.C., Thomas D.Y., Whiteway M.;
"Transcription profiling of Candida albicans cells undergoing the
yeast-to-hyphal transition.";
Mol. Biol. Cell 13:3452-3465(2002).
[8]
FUNCTION.
PubMed=14555488; DOI=10.1128/EC.2.5.1053-1060.2003;
Saville S.P., Lazzell A.L., Monteagudo C., Lopez-Ribot J.L.;
"Engineered control of cell morphology in vivo reveals distinct roles
for yeast and filamentous forms of Candida albicans during
infection.";
Eukaryot. Cell 2:1053-1060(2003).
[9]
FUNCTION.
PubMed=12940995; DOI=10.1046/j.1365-2958.2003.03646.x;
Zheng X.D., Wang Y.M., Wang Y.;
"CaSPA2 is important for polarity establishment and maintenance in
Candida albicans.";
Mol. Microbiol. 49:1391-1405(2003).
[10]
FUNCTION, AND INDUCTION.
PubMed=15189998; DOI=10.1128/EC.3.3.776-784.2004;
Lotz H., Sohn K., Brunner H., Muhlschlegel F.A., Rupp S.;
"RBR1, a novel pH-regulated cell wall gene of Candida albicans, is
repressed by RIM101 and activated by NRG1.";
Eukaryot. Cell 3:776-784(2004).
[11]
INDUCTION.
PubMed=15556091; DOI=10.1016/j.femsyr.2004.08.004;
Toyoda M., Cho T., Kaminishi H., Sudoh M., Chibana H.;
"Transcriptional profiling of the early stages of germination in
Candida albicans by real-time RT-PCR.";
FEMS Yeast Res. 5:287-296(2004).
[12]
INDUCTION.
PubMed=15554973; DOI=10.1111/j.1365-2958.2004.04350.x;
Bensen E.S., Martin S.J., Li M., Berman J., Davis D.A.;
"Transcriptional profiling in Candida albicans reveals new adaptive
responses to extracellular pH and functions for Rim101p.";
Mol. Microbiol. 54:1335-1351(2004).
[13]
FUNCTION.
PubMed=15946869; DOI=10.1016/j.fgb.2005.04.008;
Russell C.L., Brown A.J.;
"Expression of one-hybrid fusions with Staphylococcus aureus lexA in
Candida albicans confirms that Nrg1 is a transcriptional repressor and
that Gcn4 is a transcriptional activator.";
Fungal Genet. Biol. 42:676-683(2005).
[14]
FUNCTION.
PubMed=15659176; DOI=10.1111/j.1365-2958.2004.04414.x;
Staib P., Morschhauser J.;
"Differential expression of the NRG1 repressor controls species-
specific regulation of chlamydospore development in Candida albicans
and Candida dubliniensis.";
Mol. Microbiol. 55:637-652(2005).
[15]
INDUCTION.
PubMed=16710830; DOI=10.1002/yea.1373;
Umeyama T., Kaneko A., Niimi M., Uehara Y.;
"Repression of CDC28 reduces the expression of the morphology-related
transcription factors, Efg1p, Nrg1p, Rbf1p, Rim101p, Fkh2p and Tec1p
and induces cell elongation in Candida albicans.";
Yeast 23:537-552(2006).
[16]
FUNCTION.
PubMed=17005810; DOI=10.1128/AAC.00628-06;
Saville S.P., Lazzell A.L., Bryant A.P., Fretzen A., Monreal A.,
Solberg E.O., Monteagudo C., Lopez-Ribot J.L., Milne G.T.;
"Inhibition of filamentation can be used to treat disseminated
candidiasis.";
Antimicrob. Agents Chemother. 50:3312-3316(2006).
[17]
FUNCTION.
PubMed=16518764; DOI=10.1086/500950;
Chamilos G., Lionakis M.S., Lewis R.E., Lopez-Ribot J.L.,
Saville S.P., Albert N.D., Halder G., Kontoyiannis D.P.;
"Drosophila melanogaster as a facile model for large-scale studies of
virulence mechanisms and antifungal drug efficacy in Candida
species.";
J. Infect. Dis. 193:1014-1022(2006).
[18]
FUNCTION.
PubMed=18627379; DOI=10.1111/j.1462-5822.2008.01198.x;
Nobile C.J., Solis N., Myers C.L., Fay A.J., Deneault J.S., Nantel A.,
Mitchell A.P., Filler S.G.;
"Candida albicans transcription factor Rim101 mediates pathogenic
interactions through cell wall functions.";
Cell. Microbiol. 10:2180-2196(2008).
[19]
FUNCTION.
PubMed=17967861; DOI=10.1128/IAI.00982-07;
Saville S.P., Lazzell A.L., Chaturvedi A.K., Monteagudo C.,
Lopez-Ribot J.L.;
"Use of a genetically engineered strain to evaluate the pathogenic
potential of yeast cell and filamentous forms during Candida albicans
systemic infection in immunodeficient mice.";
Infect. Immun. 76:97-102(2008).
[20]
INDUCTION.
PubMed=18216277; DOI=10.1091/mbc.E07-11-1110;
Banerjee M., Thompson D.S., Lazzell A., Carlisle P.L., Pierce C.,
Monteagudo C., Lopez-Ribot J.L., Kadosh D.;
"UME6, a novel filament-specific regulator of Candida albicans hyphal
extension and virulence.";
Mol. Biol. Cell 19:1354-1365(2008).
[21]
FUNCTION.
PubMed=18653474; DOI=10.1091/mbc.E07-09-0946;
Ramsdale M., Selway L., Stead D., Walker J., Yin Z., Nicholls S.M.,
Crowe J., Sheils E.M., Brown A.J.;
"MNL1 regulates weak acid-induced stress responses of the fungal
pathogen Candida albicans.";
Mol. Biol. Cell 19:4393-4403(2008).
[22]
FUNCTION.
PubMed=19144791; DOI=10.1128/CVI.00480-08;
Saville S.P., Lazzell A.L., Chaturvedi A.K., Monteagudo C.,
Lopez-Ribot J.L.;
"Efficacy of a genetically engineered Candida albicans tet-NRG1 strain
as an experimental live attenuated vaccine against hematogenously
disseminated candidiasis.";
Clin. Vaccine Immunol. 16:430-432(2009).
[23]
FUNCTION.
PubMed=20709787; DOI=10.1128/EC.00111-10;
Uppuluri P., Pierce C.G., Thomas D.P., Bubeck S.S., Saville S.P.,
Lopez-Ribot J.L.;
"The transcriptional regulator Nrg1p controls Candida albicans biofilm
formation and dispersion.";
Eukaryot. Cell 9:1531-1537(2010).
[24]
FUNCTION.
PubMed=20232156; DOI=10.1007/s11046-010-9297-2;
Cleary I.A., Saville S.P.;
"An analysis of the impact of NRG1 overexpression on the Candida
albicans response to specific environmental stimuli.";
Mycopathologia 170:1-10(2010).
[25]
INDUCTION.
PubMed=22726313; DOI=10.1111/j.1365-2672.2012.05372.x;
Oh S., Go G.W., Mylonakis E., Kim Y.;
"The bacterial signalling molecule indole attenuates the virulence of
the fungal pathogen Candida albicans.";
J. Appl. Microbiol. 113:622-628(2012).
-!- FUNCTION: Transcriptional repressor that binds NRG1 response
elements (NRE) of target promoters. Involved in regulation of
chlamydospore formation, hyphal growth, virulence, and stress
response. Plays a key role in regulating true hyphal growth, but
does not regulate pseudohyphal growth in the same fashion. Directs
transcriptional repression of a subset of filament-specific genes
such as HWP1, HYR1, ALS8, HWP1, or ECE1; via the TUP1 pathway.
Functions with UME6 in a negative feedback loop to control the
level and duration of filament-specific gene expression in
response to inducing conditions. Plays a key role in biofilm
formation and dispersion. Plays also the role of a negative
regulator of virulence in mice models. Required for the expression
of the cell wall genes RBR1. {ECO:0000269|PubMed:11532938,
ECO:0000269|PubMed:11532939, ECO:0000269|PubMed:11737641,
ECO:0000269|PubMed:12940995, ECO:0000269|PubMed:14555488,
ECO:0000269|PubMed:15189998, ECO:0000269|PubMed:15659176,
ECO:0000269|PubMed:15946869, ECO:0000269|PubMed:16518764,
ECO:0000269|PubMed:17005810, ECO:0000269|PubMed:17967861,
ECO:0000269|PubMed:18627379, ECO:0000269|PubMed:18653474,
ECO:0000269|PubMed:19144791, ECO:0000269|PubMed:20232156,
ECO:0000269|PubMed:20709787}.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
-!- INDUCTION: Down-regulated during filament induction and in
response to serum at 37 degrees Celsius. Expression of NRG1 is
also repressed by RIM101 and under conditions that repress CDC28
expression. The bacterial signaling molecules indole and its
derivate indole-3-acetonitrile (IAN) increase NRG1 expression.
{ECO:0000269|PubMed:11532939, ECO:0000269|PubMed:12388749,
ECO:0000269|PubMed:15189998, ECO:0000269|PubMed:15554973,
ECO:0000269|PubMed:15556091, ECO:0000269|PubMed:16710830,
ECO:0000269|PubMed:18216277, ECO:0000269|PubMed:22726313}.
-!- DISRUPTION PHENOTYPE: Exhibits a high degree of filamentous growth
and leads to avirulence in a mouse model.
{ECO:0000269|PubMed:11532939}.
-----------------------------------------------------------------------
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-----------------------------------------------------------------------
EMBL; CP017629; AOW30760.1; -; Genomic_DNA.
RefSeq; XP_715199.1; XM_710106.1.
ProteinModelPortal; Q5A0E5; -.
SMR; Q5A0E5; -.
PRIDE; Q5A0E5; -.
EnsemblFungi; AOW30760; AOW30760; CAALFM_C704230WA.
GeneID; 3643166; -.
KEGG; cal:CAALFM_C704230WA; -.
CGD; CAL0000186831; NRG1.
HOGENOM; HOG000248475; -.
InParanoid; Q5A0E5; -.
OrthoDB; EOG092C5UG7; -.
Proteomes; UP000000559; Chromosome 7.
GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO; GO:0003700; F:DNA binding transcription factor activity; IDA:CGD.
GO; GO:0003690; F:double-stranded DNA binding; IDA:CGD.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0035690; P:cellular response to drug; IMP:CGD.
GO; GO:0097316; P:cellular response to N-acetyl-D-glucosamine; IMP:CGD.
GO; GO:0036244; P:cellular response to neutral pH; IMP:CGD.
GO; GO:0009267; P:cellular response to starvation; IMP:CGD.
GO; GO:0001410; P:chlamydospore formation; IMP:CGD.
GO; GO:0044114; P:development of symbiont in host; IMP:CGD.
GO; GO:0030447; P:filamentous growth; IMP:CGD.
GO; GO:0044182; P:filamentous growth of a population of unicellular organisms; IMP:CGD.
GO; GO:0036180; P:filamentous growth of a population of unicellular organisms in response to biotic stimulus; IMP:CGD.
GO; GO:0036171; P:filamentous growth of a population of unicellular organisms in response to chemical stimulus; IMP:CGD.
GO; GO:0036178; P:filamentous growth of a population of unicellular organisms in response to neutral pH; IMP:CGD.
GO; GO:0036177; P:filamentous growth of a population of unicellular organisms in response to pH; IMP:CGD.
GO; GO:0036170; P:filamentous growth of a population of unicellular organisms in response to starvation; IMP:CGD.
GO; GO:1900429; P:negative regulation of filamentous growth of a population of unicellular organisms; IMP:CGD.
GO; GO:1900444; P:negative regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus; IMP:CGD.
GO; GO:1900438; P:negative regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus; IMP:CGD.
GO; GO:1900441; P:negative regulation of filamentous growth of a population of unicellular organisms in response to neutral pH; IMP:CGD.
GO; GO:1900435; P:negative regulation of filamentous growth of a population of unicellular organisms in response to starvation; IMP:CGD.
GO; GO:0045827; P:negative regulation of isoprenoid metabolic process; IMP:CGD.
GO; GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:CGD.
GO; GO:0045892; P:negative regulation of transcription, DNA-templated; IDA:CGD.
GO; GO:0009405; P:pathogenesis; IMP:CGD.
GO; GO:0009372; P:quorum sensing; IMP:CGD.
Gene3D; 3.30.40.10; -; 1.
InterPro; IPR036236; Znf_C2H2_sf.
InterPro; IPR013087; Znf_C2H2_type.
InterPro; IPR013083; Znf_RING/FYVE/PHD.
SMART; SM00355; ZnF_C2H2; 2.
SUPFAM; SSF57667; SSF57667; 1.
PROSITE; PS00028; ZINC_FINGER_C2H2_1; 2.
PROSITE; PS50157; ZINC_FINGER_C2H2_2; 2.
2: Evidence at transcript level;
Complete proteome; Metal-binding; Nucleus; Reference proteome; Repeat;
Repressor; Stress response; Virulence; Zinc; Zinc-finger.
CHAIN 1 310 Transcriptional regulator NRG1.
/FTId=PRO_0000424609.
ZN_FING 228 250 C2H2-type 1. {ECO:0000255|PROSITE-
ProRule:PRU00042}.
ZN_FING 256 280 C2H2-type 2. {ECO:0000255|PROSITE-
ProRule:PRU00042}.
COMPBIAS 74 79 Poly-Ala.
COMPBIAS 89 157 Pro-rich.
COMPBIAS 117 170 Gln-rich.
SEQUENCE 310 AA; 34299 MW; FC798E706E6CE147 CRC64;
MLYQQSYPIT NKLLNASAAG STSTASIIDG GCTLSKPGSG KTKSTTSLPS FNELLTSIPL
PNEFKPSTKN TNQAAAATAT SPYNYYMGPP AQHRLPTPPP YPMSSPTTAT AATPLSQQSP
HLQPQQTLQQ PQPYHQQYYN YQYAAPPYPH PSQVPPPASY QQRHQQPMYQ NTNGVPIIIR
PSPGLITPTS TTFDHAKIRS NSTGDLSANS LALSSNNNTQ SKDPRRKHVC KVCSRSFTTS
GHLARHNRIH TGERKHQCPW PTCEARFARQ DNCNQHYKTH TNGKNKRNRQ QHRTLEASHV
GTKYNTKSLV


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